RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ATP5G1P05496 136 aa11.31□□□□□ -0.6
SMARCD1-202ENST00000394963 SPART-AS1P0CW21 52 aa11.31□□□□□ -0.6
SMARCD1-202ENST00000394963 LINC00269Q8N2A0 174 aa11.31□□□□□ -0.6
SMARCD1-202ENST00000394963 C9JAW5 83 aa11.3□□□□□ -0.6
SMARCD1-202ENST00000394963 BEAN1Q3B7T3 259 aa11.3□□□□□ -0.6
SMARCD1-202ENST00000394963 Q8N3U1 123 aa11.3□□□□□ -0.6
SMARCD1-202ENST00000394963 Q9HAA7 133 aa11.3□□□□□ -0.6
SMARCD1-202ENST00000394963 HIGD1BQ9P298 99 aa11.3□□□□□ -0.6
SMARCD1-202ENST00000394963 IGHV1-58A0A0C4DH39 117 aa11.3□□□□□ -0.6
SMARCD1-202ENST00000394963 COX6CP09669 75 aa11.3□□□□□ -0.6
SMARCD1-202ENST00000394963 PKD1L1Q8TDX9 2849 aa11.29□□□□□ -0.6
SMARCD1-202ENST00000394963 TRBV10-1A0A0K0K1A3 114 aa11.29□□□□□ -0.6
SMARCD1-202ENST00000394963 INSL3P51460 131 aa11.29□□□□□ -0.6
SMARCD1-202ENST00000394963 CFAP161Q6P656 301 aa11.29□□□□□ -0.6
SMARCD1-202ENST00000394963 CYSRT1A8MQ03 144 aa11.29□□□□□ -0.6
SMARCD1-202ENST00000394963 SS18Q15532 418 aa11.29□□□□□ -0.6
SMARCD1-202ENST00000394963 PIK3CD-AS1Q5SR53 167 aa11.29□□□□□ -0.6
SMARCD1-202ENST00000394963 LYRM7Q5U5X0 104 aa11.29□□□□□ -0.6
SMARCD1-202ENST00000394963 TRBV6-8A0A0A6YYG3 113 aa11.28□□□□□ -0.6
SMARCD1-202ENST00000394963 OCIAD2Q56VL3 154 aa11.28□□□□□ -0.6
SMARCD1-202ENST00000394963 C10orf126Q8N4M7 172 aa11.28□□□□□ -0.6
SMARCD1-202ENST00000394963 CRPP02741 224 aa11.28□□□□□ -0.6
SMARCD1-202ENST00000394963 UBE2D3P61077 147 aa11.28□□□□□ -0.6
SMARCD1-202ENST00000394963 UBE2D2P62837 147 aa11.28□□□□□ -0.6
SMARCD1-202ENST00000394963 CELA1Q9UNI1 258 aa11.28□□□□□ -0.6
SMARCD1-202ENST00000394963 FHL2Q14192 279 aa11.28□□□□□ -0.6
SMARCD1-202ENST00000394963 J3QR89 54 aa11.27□□□□□ -0.6
SMARCD1-202ENST00000394963 KRTAP24-1Q3LI83 254 aa11.27□□□□□ -0.61
SMARCD1-202ENST00000394963 LINC00242Q5T6M2 205 aa11.27□□□□□ -0.61
SMARCD1-202ENST00000394963 RPL13AP40429 203 aaKnown RBP11.26□□□□□ -0.61
SMARCD1-202ENST00000394963 C19orf73Q9NVV2 129 aa11.26□□□□□ -0.61
SMARCD1-202ENST00000394963 TEX48A0A1B0GUV7 120 aa11.25□□□□□ -0.61
SMARCD1-202ENST00000394963 TM2D2Q9BX73 214 aa11.25□□□□□ -0.61
SMARCD1-202ENST00000394963 RPL32P62910 135 aaKnown RBP11.25□□□□□ -0.61
SMARCD1-202ENST00000394963 C2orf82Q6UX34 121 aa11.25□□□□□ -0.61
SMARCD1-202ENST00000394963 CLUHP3Q96NS8 147 aa11.25□□□□□ -0.61
SMARCD1-202ENST00000394963 ADAMTSL4-AS1Q5T5F5 129 aa11.25□□□□□ -0.61
SMARCD1-202ENST00000394963 TRBV6-4A0A1B0GX49 114 aa11.24□□□□□ -0.61
SMARCD1-202ENST00000394963 LINC01546A6NGU7 62 aa11.24□□□□□ -0.61
SMARCD1-202ENST00000394963 G3V4G9 280 aa11.24□□□□□ -0.61
SMARCD1-202ENST00000394963 TSPAN13O95857 204 aa11.24□□□□□ -0.61
SMARCD1-202ENST00000394963 CFC1BP0CG36 223 aa11.24□□□□□ -0.61
SMARCD1-202ENST00000394963 CFC1P0CG37 223 aa11.24□□□□□ -0.61
SMARCD1-202ENST00000394963 RBX1P62877 108 aa11.24□□□□□ -0.61
SMARCD1-202ENST00000394963 TAL2Q16559 108 aa11.24□□□□□ -0.61
SMARCD1-202ENST00000394963 TINCRA0A1B0GVN0 87 aa11.23□□□□□ -0.61
SMARCD1-202ENST00000394963 UBE2D1P51668 147 aa11.23□□□□□ -0.61
SMARCD1-202ENST00000394963 CDC42SE2Q9NRR3 84 aa11.23□□□□□ -0.61
SMARCD1-202ENST00000394963 CLEC2BQ92478 149 aa11.23□□□□□ -0.61
SMARCD1-202ENST00000394963 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
SMARCD1-202ENST00000394963 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.22□□□□□ -0.61
SMARCD1-202ENST00000394963 PYGO1Q9Y3Y4 419 aa11.22□□□□□ -0.61
SMARCD1-202ENST00000394963 MRPS36P82909 103 aaKnown RBP11.21□□□□□ -0.61
SMARCD1-202ENST00000394963 GTSF1LQ9H1H1 148 aa11.21□□□□□ -0.62
SMARCD1-202ENST00000394963 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
SMARCD1-202ENST00000394963 MRPL23Q16540 153 aaKnown RBP11.2□□□□□ -0.62
SMARCD1-202ENST00000394963 X6R8D5 127 aa11.2□□□□□ -0.62
SMARCD1-202ENST00000394963 COX7B2Q8TF08 81 aa11.2□□□□□ -0.62
SMARCD1-202ENST00000394963 CRYBA4P53673 196 aa11.19□□□□□ -0.62
SMARCD1-202ENST00000394963 AMELXQ99217 191 aa11.19□□□□□ -0.62
SMARCD1-202ENST00000394963 CSNK1G2-AS1Q8NCQ2 148 aa11.19□□□□□ -0.62
SMARCD1-202ENST00000394963 HIGD2BQ4VC39 106 aa11.18□□□□□ -0.62
SMARCD1-202ENST00000394963 Q6ZTC4 211 aa11.18□□□□□ -0.62
SMARCD1-202ENST00000394963 TCL1BO95988 128 aa11.17□□□□□ -0.62
SMARCD1-202ENST00000394963 ICOSQ9Y6W8 199 aa11.17□□□□□ -0.62
SMARCD1-202ENST00000394963 A0A0J9YWU9 116 aa11.17□□□□□ -0.62
SMARCD1-202ENST00000394963 PLAC8L1A1L4L8 177 aa11.17□□□□□ -0.62
SMARCD1-202ENST00000394963 IGKV2D-24A0A075B6R9 120 aa11.17□□□□□ -0.62
SMARCD1-202ENST00000394963 UFSP1Q6NVU6 142 aa11.17□□□□□ -0.62
SMARCD1-202ENST00000394963 REG3AQ06141 175 aa11.16□□□□□ -0.62
SMARCD1-202ENST00000394963 C9orf116Q5BN46 136 aaPredicted RBP11.16□□□□□ -0.62
SMARCD1-202ENST00000394963 CITED1Q99966 193 aa11.16□□□□□ -0.62
SMARCD1-202ENST00000394963 EIF4EBP3O60516 100 aaPredicted RBP11.15□□□□□ -0.62
SMARCD1-202ENST00000394963 STAB2Q8WWQ8 2551 aa11.15□□□□□ -0.62
SMARCD1-202ENST00000394963 SMIM1B2RUZ4 78 aa11.15□□□□□ -0.62
SMARCD1-202ENST00000394963 DNAL4O96015 105 aa11.15□□□□□ -0.62
SMARCD1-202ENST00000394963 SND1-IT1Q9HBX3 110 aa11.15□□□□□ -0.62
SMARCD1-202ENST00000394963 CHCHD10Q8WYQ3 142 aaPredicted RBP11.14□□□□□ -0.63
SMARCD1-202ENST00000394963 TENM3Q9P273 2699 aa11.14□□□□□ -0.63
SMARCD1-202ENST00000394963 EDA2RQ9HAV5 297 aa11.14□□□□□ -0.63
SMARCD1-202ENST00000394963 LINC00959A0A1B0GUT2 108 aa11.14□□□□□ -0.63
SMARCD1-202ENST00000394963 LYRM9A8MSI8 78 aa11.14□□□□□ -0.63
SMARCD1-202ENST00000394963 A8MTW9 85 aa11.14□□□□□ -0.63
SMARCD1-202ENST00000394963 COX7A2LO14548 114 aa11.14□□□□□ -0.63
SMARCD1-202ENST00000394963 C11orf45Q8TAV5 145 aa11.13□□□□□ -0.63
SMARCD1-202ENST00000394963 GAGE12HA6NDE8 117 aa11.13□□□□□ -0.63
SMARCD1-202ENST00000394963 SMIM9A6NGZ8 99 aa11.13□□□□□ -0.63
SMARCD1-202ENST00000394963 MIFP14174 115 aa11.13□□□□□ -0.63
SMARCD1-202ENST00000394963 PRR3P79522 188 aaKnown RBP11.13□□□□□ -0.63
SMARCD1-202ENST00000394963 DEFB131BA0A096LNP1 70 aa11.12□□□□□ -0.63
SMARCD1-202ENST00000394963 SLC25A20O43772 301 aa11.12□□□□□ -0.63
SMARCD1-202ENST00000394963 MIAQ16674 131 aa11.12□□□□□ -0.63
SMARCD1-202ENST00000394963 KPRPQ5T749 579 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-202ENST00000394963 ZFAND6Q6FIF0 208 aa11.12□□□□□ -0.63
SMARCD1-202ENST00000394963 NTN5Q8WTR8 489 aaPredicted RBP11.12□□□□□ -0.63
SMARCD1-202ENST00000394963 OVOL2Q9BRP0 275 aa11.12□□□□□ -0.63
SMARCD1-202ENST00000394963 LECT2O14960 151 aa11.12□□□□□ -0.63
SMARCD1-202ENST00000394963 S100A7L2Q5SY68 101 aa11.12□□□□□ -0.63
SMARCD1-202ENST00000394963 ZNF561-AS1K7EIQ3 104 aa11.11□□□□□ -0.63
SMARCD1-202ENST00000394963 LINC00308Q8TCZ7 52 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms