RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 LINC00242Q5T6M2 205 aa7.58□□□□□ -1.2
ACTN1-203ENST00000394419 TRBV10-2A0A0K0K1G8 114 aa7.58□□□□□ -1.2
ACTN1-203ENST00000394419 RNF152Q8N8N0 203 aa7.58□□□□□ -1.2
ACTN1-203ENST00000394419 ESM1Q9NQ30 184 aa7.57□□□□□ -1.2
ACTN1-203ENST00000394419 C15orf53Q8NAA6 179 aa7.57□□□□□ -1.2
ACTN1-203ENST00000394419 LINC00308Q8TCZ7 52 aa7.57□□□□□ -1.2
ACTN1-203ENST00000394419 TRBV30A0A0K0K1B3 111 aa7.56□□□□□ -1.2
ACTN1-203ENST00000394419 PAX4O43316 350 aa7.56□□□□□ -1.2
ACTN1-203ENST00000394419 HTN3P15516 51 aa7.56□□□□□ -1.2
ACTN1-203ENST00000394419 DAZ2Q13117 558 aaKnown RBP7.56□□□□□ -1.2
ACTN1-203ENST00000394419 DAZ4Q86SG3 579 aaKnown RBP7.56□□□□□ -1.2
ACTN1-203ENST00000394419 DAZ3Q9NR90 486 aaKnown RBP7.56□□□□□ -1.2
ACTN1-203ENST00000394419 DEFB4AO15263 64 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 CR1P17927 2039 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 CCDC179H3BU77 68 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 H7C423 109 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 DNAL4O96015 105 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 IFITM1P13164 125 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 XCL1P47992 114 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 C6orf226Q5I0X4 101 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 NTM-AS1Q6ZSK4 140 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 LINC01006Q8NI28 216 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 FAM104AQ969W3 186 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 LITAFQ99732 161 aa7.55□□□□□ -1.2
ACTN1-203ENST00000394419 TRAV4A0A0B4J268 109 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 NDUFA1O15239 70 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 FSHBP01225 129 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 CRPP02741 224 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 SPANXDQ9BXN6 97 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 SPANXCQ9NY87 97 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 RNASE1P07998 156 aaKnown RBP7.54□□□□□ -1.2
ACTN1-203ENST00000394419 BEAN1Q3B7T3 259 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 COPS9Q8WXC6 57 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 Q9HAA7 133 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 UBR5O95071 2799 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-203ENST00000394419 TIRAPP58753 221 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 MIR7-3HGQ8N6C7 128 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 FAM110AQ9BQ89 295 aa7.54□□□□□ -1.2
ACTN1-203ENST00000394419 SMIM1B2RUZ4 78 aa7.53□□□□□ -1.2
ACTN1-203ENST00000394419 TRAV25A0A0B4J276 109 aa7.53□□□□□ -1.2
ACTN1-203ENST00000394419 TRBV10-1A0A0K0K1A3 114 aa7.53□□□□□ -1.2
ACTN1-203ENST00000394419 M0QXV9 152 aa7.53□□□□□ -1.2
ACTN1-203ENST00000394419 CDC42SE2Q9NRR3 84 aa7.53□□□□□ -1.2
ACTN1-203ENST00000394419 FLNBO75369 2602 aaKnown RBP7.52□□□□□ -1.21
ACTN1-203ENST00000394419 SMR3AQ99954 134 aa7.52□□□□□ -1.21
ACTN1-203ENST00000394419 C16orf74Q96GX8 76 aa7.52□□□□□ -1.21
ACTN1-203ENST00000394419 PPDPFQ9H3Y8 114 aa7.52□□□□□ -1.21
ACTN1-203ENST00000394419 UNC79Q9P2D8 2635 aa7.52□□□□□ -1.21
ACTN1-203ENST00000394419 Q8N2B8 174 aa7.51□□□□□ -1.21
ACTN1-203ENST00000394419 SND1-IT1Q9HBX3 110 aa7.51□□□□□ -1.21
ACTN1-203ENST00000394419 IGLV10-54A0A075B6I4 117 aa7.51□□□□□ -1.21
ACTN1-203ENST00000394419 BAALC-AS2P0C853 105 aa7.51□□□□□ -1.21
ACTN1-203ENST00000394419 GYPEP15421 78 aa7.51□□□□□ -1.21
ACTN1-203ENST00000394419 IGLV4-60A0A075B6I1 120 aa7.51□□□□□ -1.21
ACTN1-203ENST00000394419 COX7B2Q8TF08 81 aa7.51□□□□□ -1.21
ACTN1-203ENST00000394419 LST1O00453 97 aa7.5□□□□□ -1.21
ACTN1-203ENST00000394419 GAGE2AQ6NT46 116 aa7.5□□□□□ -1.21
ACTN1-203ENST00000394419 ATP5G1P05496 136 aa7.5□□□□□ -1.21
ACTN1-203ENST00000394419 SOSTDC1Q6X4U4 206 aa7.5□□□□□ -1.21
ACTN1-203ENST00000394419 LRRC75A-AS1Q8N1F1 130 aa7.5□□□□□ -1.21
ACTN1-203ENST00000394419 H3BT86 120 aa7.49□□□□□ -1.21
ACTN1-203ENST00000394419 SBSPONQ8IVN8 264 aa7.49□□□□□ -1.21
ACTN1-203ENST00000394419 NBPF19A0A087WUL8 3843 aa7.48□□□□□ -1.21
ACTN1-203ENST00000394419 CMC4P56277 68 aaPredicted RBP7.48□□□□□ -1.21
ACTN1-203ENST00000394419 TMEM86BQ8N661 226 aa7.48□□□□□ -1.21
ACTN1-203ENST00000394419 LINC00482Q8N8I6 264 aa7.48□□□□□ -1.21
ACTN1-203ENST00000394419 EDA2RQ9HAV5 297 aa7.48□□□□□ -1.21
ACTN1-203ENST00000394419 COX7A2LO14548 114 aa7.48□□□□□ -1.21
ACTN1-203ENST00000394419 ZNF469Q96JG9 3925 aaPredicted RBP7.47□□□□□ -1.21
ACTN1-203ENST00000394419 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
ACTN1-203ENST00000394419 A8MTW9 85 aa7.47□□□□□ -1.21
ACTN1-203ENST00000394419 TIMM17BO60830 172 aa7.47□□□□□ -1.21
ACTN1-203ENST00000394419 MRPL23Q16540 153 aaKnown RBP7.47□□□□□ -1.21
ACTN1-203ENST00000394419 NHLRC4P0CG21 123 aaPredicted RBP7.47□□□□□ -1.21
ACTN1-203ENST00000394419 MALP21145 153 aa7.47□□□□□ -1.21
ACTN1-203ENST00000394419 DEFB135Q30KP9 77 aa7.46□□□□□ -1.21
ACTN1-203ENST00000394419 TRAV13-2A0A0B4J235 113 aa7.46□□□□□ -1.22
ACTN1-203ENST00000394419 IGLV5-39A0A0G2JS06 123 aa7.46□□□□□ -1.22
ACTN1-203ENST00000394419 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.22
ACTN1-203ENST00000394419 SS18Q15532 418 aa7.46□□□□□ -1.22
ACTN1-203ENST00000394419 TEP1Q99973 2627 aaKnown RBP7.45□□□□□ -1.22
ACTN1-203ENST00000394419 TRBV6-4A0A1B0GX49 114 aa7.45□□□□□ -1.22
ACTN1-203ENST00000394419 SLPIP03973 132 aa7.45□□□□□ -1.22
ACTN1-203ENST00000394419 NDUFV3P56181 108 aaKnown RBP7.45□□□□□ -1.22
ACTN1-203ENST00000394419 IGLV5-45A0A087WSX0 123 aa7.44□□□□□ -1.22
ACTN1-203ENST00000394419 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
ACTN1-203ENST00000394419 GIG44P09565 113 aaPredicted RBP7.44□□□□□ -1.22
ACTN1-203ENST00000394419 F5H768 121 aa7.44□□□□□ -1.22
ACTN1-203ENST00000394419 LECT2O14960 151 aa7.44□□□□□ -1.22
ACTN1-203ENST00000394419 KRTAP1-3Q8IUG1 177 aa7.44□□□□□ -1.22
ACTN1-203ENST00000394419 FHL2Q14192 279 aa7.43□□□□□ -1.22
ACTN1-203ENST00000394419 FAM222AQ5U5X8 452 aa7.43□□□□□ -1.22
ACTN1-203ENST00000394419 TENM4Q6N022 2769 aa7.43□□□□□ -1.22
ACTN1-203ENST00000394419 CSDC2Q9Y534 153 aaKnown RBP7.43□□□□□ -1.22
ACTN1-203ENST00000394419 VWFP04275 2813 aa7.42□□□□□ -1.22
ACTN1-203ENST00000394419 CCL18P55774 89 aa7.42□□□□□ -1.22
ACTN1-203ENST00000394419 LINC00269Q8N2A0 174 aa7.42□□□□□ -1.22
ACTN1-203ENST00000394419 LINC00526Q96FQ7 95 aa7.42□□□□□ -1.22
ACTN1-203ENST00000394419 LOC107984640A0A0U1RRK4 108 aa7.42□□□□□ -1.22
ACTN1-203ENST00000394419 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms