RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 KNCNA6PVL3 124 aa13.79□□□□□ -0.2
CCDC50-202ENST00000392456 NPC2P61916 151 aa13.78□□□□□ -0.2
CCDC50-202ENST00000392456 LINC01561Q8N1V8 128 aa13.78□□□□□ -0.2
CCDC50-202ENST00000392456 RNASE4P34096 147 aaKnown RBP13.78□□□□□ -0.2
CCDC50-202ENST00000392456 C2orf66Q6UXQ4 117 aa13.78□□□□□ -0.2
CCDC50-202ENST00000392456 APRG1Q8IVJ8 170 aa13.78□□□□□ -0.2
CCDC50-202ENST00000392456 TIMM21Q9BVV7 248 aa13.78□□□□□ -0.2
CCDC50-202ENST00000392456 LENEPQ9Y5L5 61 aa13.78□□□□□ -0.2
CCDC50-202ENST00000392456 TRAV12-2A0A075B6T6 113 aa13.77□□□□□ -0.21
CCDC50-202ENST00000392456 FHL2Q14192 279 aa13.76□□□□□ -0.21
CCDC50-202ENST00000392456 COL6A5A8TX70 2615 aa13.76□□□□□ -0.21
CCDC50-202ENST00000392456 LGALS3P17931 250 aaKnown RBP13.75□□□□□ -0.21
CCDC50-202ENST00000392456 MAP6D1Q9H9H5 199 aa13.75□□□□□ -0.21
CCDC50-202ENST00000392456 TRAV8-3A0A0A6YYJ7 113 aa13.74□□□□□ -0.21
CCDC50-202ENST00000392456 NDUFC2O95298 119 aa13.74□□□□□ -0.21
CCDC50-202ENST00000392456 LINC00482Q8N8I6 264 aa13.74□□□□□ -0.21
CCDC50-202ENST00000392456 SERP1Q9Y6X1 66 aa13.74□□□□□ -0.21
CCDC50-202ENST00000392456 KLLNB2CW77 178 aa13.73□□□□□ -0.21
CCDC50-202ENST00000392456 PF4P02776 101 aa13.73□□□□□ -0.21
CCDC50-202ENST00000392456 ODF3L2Q3SX64 289 aa13.73□□□□□ -0.21
CCDC50-202ENST00000392456 SPINK13Q1W4C9 94 aa13.73□□□□□ -0.21
CCDC50-202ENST00000392456 KRTAP24-1Q3LI83 254 aa13.73□□□□□ -0.21
CCDC50-202ENST00000392456 TP53TG1Q9Y2A0 90 aa13.72□□□□□ -0.21
CCDC50-202ENST00000392456 RBMY1BA6NDE4 496 aaKnown RBP13.72□□□□□ -0.21
CCDC50-202ENST00000392456 RBMY1EA6NEQ0 496 aaKnown RBP13.72□□□□□ -0.21
CCDC50-202ENST00000392456 IGLV1-51P01701 117 aa13.72□□□□□ -0.21
CCDC50-202ENST00000392456 RBMY1DP0C7P1 496 aaKnown RBP13.72□□□□□ -0.21
CCDC50-202ENST00000392456 TRAV12-3A0A0B4J271 114 aa13.71□□□□□ -0.21
CCDC50-202ENST00000392456 A0A0U1RQV1 116 aa13.71□□□□□ -0.21
CCDC50-202ENST00000392456 DAND5Q8N907 189 aa13.71□□□□□ -0.21
CCDC50-202ENST00000392456 TRAV21A0A0B4J279 112 aa13.7□□□□□ -0.22
CCDC50-202ENST00000392456 I3L3M4 83 aa13.7□□□□□ -0.22
CCDC50-202ENST00000392456 PRSS2P07478 247 aa13.7□□□□□ -0.22
CCDC50-202ENST00000392456 GNRH2O43555 120 aa13.7□□□□□ -0.22
CCDC50-202ENST00000392456 TSHBP01222 138 aa13.7□□□□□ -0.22
CCDC50-202ENST00000392456 SUMO2P61956 95 aaKnown RBP13.69□□□□□ -0.22
CCDC50-202ENST00000392456 WFDC10AQ9H1F0 79 aa13.69□□□□□ -0.22
CCDC50-202ENST00000392456 PKD1L1Q8TDX9 2849 aa13.69□□□□□ -0.22
CCDC50-202ENST00000392456 IGHV4-4A0A075B6R2 117 aa13.68□□□□□ -0.22
CCDC50-202ENST00000392456 C6orf226Q5I0X4 101 aa13.68□□□□□ -0.22
CCDC50-202ENST00000392456 USP17L23D6RBM5 183 aa13.68□□□□□ -0.22
CCDC50-202ENST00000392456 FP248Q71RG6 208 aaPredicted RBP13.68□□□□□ -0.22
CCDC50-202ENST00000392456 IL17DQ8TAD2 202 aa13.68□□□□□ -0.22
CCDC50-202ENST00000392456 LEPROTO15243 131 aa13.67□□□□□ -0.22
CCDC50-202ENST00000392456 RBMY1A1P0DJD3 496 aaKnown RBP13.67□□□□□ -0.22
CCDC50-202ENST00000392456 RBMY1CP0DJD4 496 aa13.67□□□□□ -0.22
CCDC50-202ENST00000392456 RBMY1FQ15415 496 aaKnown RBP13.67□□□□□ -0.22
CCDC50-202ENST00000392456 SPANXN1Q5VSR9 72 aa13.66□□□□□ -0.22
CCDC50-202ENST00000392456 SDHAF1A6NFY7 115 aa13.66□□□□□ -0.22
CCDC50-202ENST00000392456 A8MTW9 85 aa13.65□□□□□ -0.22
CCDC50-202ENST00000392456 PRM2P04554 102 aa13.65□□□□□ -0.22
CCDC50-202ENST00000392456 TIRAPP58753 221 aa13.65□□□□□ -0.22
CCDC50-202ENST00000392456 TMEM243Q9BU79 118 aa13.65□□□□□ -0.22
CCDC50-202ENST00000392456 SMIM26A0A096LP01 95 aa13.65□□□□□ -0.22
CCDC50-202ENST00000392456 DAZ2Q13117 558 aaKnown RBP13.65□□□□□ -0.22
CCDC50-202ENST00000392456 DAZ4Q86SG3 579 aaKnown RBP13.65□□□□□ -0.22
CCDC50-202ENST00000392456 BRK1Q8WUW1 75 aa13.65□□□□□ -0.22
CCDC50-202ENST00000392456 DAZ3Q9NR90 486 aaKnown RBP13.65□□□□□ -0.22
CCDC50-202ENST00000392456 C19orf73Q9NVV2 129 aa13.64□□□□□ -0.23
CCDC50-202ENST00000392456 MUC4Q99102 2169 aa13.63□□□□□ -0.23
CCDC50-202ENST00000392456 IGIPA6NJ69 53 aa13.63□□□□□ -0.23
CCDC50-202ENST00000392456 RNASE3P12724 160 aaKnown RBP13.63□□□□□ -0.23
CCDC50-202ENST00000392456 BEAN1Q3B7T3 259 aa13.63□□□□□ -0.23
CCDC50-202ENST00000392456 A0A087WVE0 104 aa13.63□□□□□ -0.23
CCDC50-202ENST00000392456 A0A0J9YXY3 114 aa13.63□□□□□ -0.23
CCDC50-202ENST00000392456 Q6JHZ5 121 aa13.63□□□□□ -0.23
CCDC50-202ENST00000392456 LITAFQ99732 161 aa13.63□□□□□ -0.23
CCDC50-202ENST00000392456 FAM19A1Q7Z5A9 133 aa13.62□□□□□ -0.23
CCDC50-202ENST00000392456 A0A0U1RRA0 63 aa13.61□□□□□ -0.23
CCDC50-202ENST00000392456 ZNF876PQ49A33 203 aa13.61□□□□□ -0.23
CCDC50-202ENST00000392456 RPL39LQ96EH5 51 aaKnown RBP13.61□□□□□ -0.23
CCDC50-202ENST00000392456 IGKV3D-7A0A0C4DH55 119 aa13.61□□□□□ -0.23
CCDC50-202ENST00000392456 S100A4P26447 101 aaKnown RBP13.61□□□□□ -0.23
CCDC50-202ENST00000392456 C22orf24Q9Y442 160 aa13.61□□□□□ -0.23
CCDC50-202ENST00000392456 HTN1P15515 57 aa13.6□□□□□ -0.23
CCDC50-202ENST00000392456 NBEAL2Q6ZNJ1 2754 aa13.6□□□□□ -0.23
CCDC50-202ENST00000392456 STHQ8IWL8 128 aa13.59□□□□□ -0.23
CCDC50-202ENST00000392456 XCL2Q9UBD3 114 aa13.59□□□□□ -0.23
CCDC50-202ENST00000392456 M0R381 172 aa13.58□□□□□ -0.23
CCDC50-202ENST00000392456 INAFM2P0DMQ5 153 aa13.58□□□□□ -0.24
CCDC50-202ENST00000392456 CMYA5Q8N3K9 4069 aa13.58□□□□□ -0.24
CCDC50-202ENST00000392456 TMEM141Q96I45 108 aa13.57□□□□□ -0.24
CCDC50-202ENST00000392456 IGHV1OR15-1A0A075B7D0 117 aa13.57□□□□□ -0.24
CCDC50-202ENST00000392456 NACAE9PAV3 2078 aa13.56□□□□□ -0.24
CCDC50-202ENST00000392456 IGHV3-16A0A0C4DH30 117 aa13.56□□□□□ -0.24
CCDC50-202ENST00000392456 PHLDA3Q9Y5J5 127 aa13.56□□□□□ -0.24
CCDC50-202ENST00000392456 TIMM17AQ99595 171 aa13.55□□□□□ -0.24
CCDC50-202ENST00000392456 GIG44P09565 113 aaPredicted RBP13.55□□□□□ -0.24
CCDC50-202ENST00000392456 CIRBPQ14011 172 aaKnown RBP13.55□□□□□ -0.24
CCDC50-202ENST00000392456 C9orf66Q5T8R8 295 aa13.54□□□□□ -0.24
CCDC50-202ENST00000392456 FAM222AQ5U5X8 452 aa13.54□□□□□ -0.24
CCDC50-202ENST00000392456 WFDC9Q8NEX5 89 aa13.54□□□□□ -0.24
CCDC50-202ENST00000392456 UBE2D4Q9Y2X8 147 aa13.54□□□□□ -0.24
CCDC50-202ENST00000392456 IGHV3-64A0A075B6Q5 118 aa13.53□□□□□ -0.24
CCDC50-202ENST00000392456 H7BZZ5 65 aa13.53□□□□□ -0.24
CCDC50-202ENST00000392456 BAALC-AS2P0C853 105 aa13.53□□□□□ -0.24
CCDC50-202ENST00000392456 ADAMTSL4-AS1Q5T5F5 129 aa13.53□□□□□ -0.24
CCDC50-202ENST00000392456 XCL1P47992 114 aa13.53□□□□□ -0.24
CCDC50-202ENST00000392456 COX7A2LO14548 114 aa13.52□□□□□ -0.24
CCDC50-202ENST00000392456 C1orf158Q8N1D5 194 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms