RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 KLLNB2CW77 178 aa12.42□□□□□ -0.42
TRAF3IP1-202ENST00000391993 HTN3P15516 51 aa12.42□□□□□ -0.42
TRAF3IP1-202ENST00000391993 FAM218AQ96MZ4 157 aa12.42□□□□□ -0.42
TRAF3IP1-202ENST00000391993 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
TRAF3IP1-202ENST00000391993 NOP10Q9NPE3 64 aaKnown RBP12.42□□□□□ -0.42
TRAF3IP1-202ENST00000391993 IGLV10-54A0A075B6I4 117 aa12.41□□□□□ -0.42
TRAF3IP1-202ENST00000391993 RNF223E7ERA6 249 aa12.41□□□□□ -0.42
TRAF3IP1-202ENST00000391993 H0YGX0 51 aa12.41□□□□□ -0.42
TRAF3IP1-202ENST00000391993 UBE2D4Q9Y2X8 147 aa12.41□□□□□ -0.42
TRAF3IP1-202ENST00000391993 IGHV4-59P01825 116 aa12.41□□□□□ -0.42
TRAF3IP1-202ENST00000391993 SLURP1P55000 103 aa12.41□□□□□ -0.42
TRAF3IP1-202ENST00000391993 EPG5Q9HCE0 2579 aa12.41□□□□□ -0.42
TRAF3IP1-202ENST00000391993 DMDP11532 3685 aa12.4□□□□□ -0.42
TRAF3IP1-202ENST00000391993 DPH3Q96FX2 82 aa12.39□□□□□ -0.43
TRAF3IP1-202ENST00000391993 EBI3Q14213 229 aa12.39□□□□□ -0.43
TRAF3IP1-202ENST00000391993 TRAV25A0A0B4J276 109 aa12.39□□□□□ -0.43
TRAF3IP1-202ENST00000391993 CCL19Q99731 98 aa12.39□□□□□ -0.43
TRAF3IP1-202ENST00000391993 CSMD1Q96PZ7 3565 aa12.39□□□□□ -0.43
TRAF3IP1-202ENST00000391993 Q6ZSN1 163 aa12.38□□□□□ -0.43
TRAF3IP1-202ENST00000391993 LY6DQ14210 128 aa12.38□□□□□ -0.43
TRAF3IP1-202ENST00000391993 TNRC18O15417 2968 aaPredicted RBP12.38□□□□□ -0.43
TRAF3IP1-202ENST00000391993 AKAP13Q12802 2813 aa12.36□□□□□ -0.43
TRAF3IP1-202ENST00000391993 LINC00242Q5T6M2 205 aa12.36□□□□□ -0.43
TRAF3IP1-202ENST00000391993 SOSTDC1Q6X4U4 206 aa12.36□□□□□ -0.43
TRAF3IP1-202ENST00000391993 PIP4P1Q86T03 277 aa12.36□□□□□ -0.43
TRAF3IP1-202ENST00000391993 Q8NA96 180 aa12.36□□□□□ -0.43
TRAF3IP1-202ENST00000391993 C9orf85Q96MD7 179 aa12.36□□□□□ -0.43
TRAF3IP1-202ENST00000391993 ASH1LQ9NR48 2969 aaKnown RBP12.36□□□□□ -0.43
TRAF3IP1-202ENST00000391993 PRR3P79522 188 aaKnown RBP12.36□□□□□ -0.43
TRAF3IP1-202ENST00000391993 IGHV4-61A0A0C4DH41 118 aa12.35□□□□□ -0.43
TRAF3IP1-202ENST00000391993 PYGO1Q9Y3Y4 419 aa12.35□□□□□ -0.43
TRAF3IP1-202ENST00000391993 ACANP16112 2415 aa12.35□□□□□ -0.43
TRAF3IP1-202ENST00000391993 CDSNQ15517 529 aa12.34□□□□□ -0.43
TRAF3IP1-202ENST00000391993 Q6ZTI0 123 aa12.34□□□□□ -0.43
TRAF3IP1-202ENST00000391993 DCANP1Q8TF63 244 aa12.34□□□□□ -0.43
TRAF3IP1-202ENST00000391993 LITAFQ99732 161 aa12.33□□□□□ -0.44
TRAF3IP1-202ENST00000391993 ESM1Q9NQ30 184 aa12.33□□□□□ -0.44
TRAF3IP1-202ENST00000391993 LRCOL1A6NCL2 159 aa12.33□□□□□ -0.44
TRAF3IP1-202ENST00000391993 DOPEY1Q5JWR5 2465 aa12.32□□□□□ -0.44
TRAF3IP1-202ENST00000391993 COL12A1Q99715 3063 aa12.32□□□□□ -0.44
TRAF3IP1-202ENST00000391993 CRYGAP11844 174 aa12.32□□□□□ -0.44
TRAF3IP1-202ENST00000391993 FAM19A4Q96LR4 140 aa12.32□□□□□ -0.44
TRAF3IP1-202ENST00000391993 IGHV4-28A0A0C4DH34 117 aa12.32□□□□□ -0.44
TRAF3IP1-202ENST00000391993 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
TRAF3IP1-202ENST00000391993 SMIM1B2RUZ4 78 aa12.31□□□□□ -0.44
TRAF3IP1-202ENST00000391993 K7EQG2 157 aa12.31□□□□□ -0.44
TRAF3IP1-202ENST00000391993 CHCHD7Q9BUK0 85 aa12.31□□□□□ -0.44
TRAF3IP1-202ENST00000391993 F8WEM9 126 aa12.3□□□□□ -0.44
TRAF3IP1-202ENST00000391993 CCL18P55774 89 aa12.3□□□□□ -0.44
TRAF3IP1-202ENST00000391993 TIMM17BO60830 172 aa12.29□□□□□ -0.44
TRAF3IP1-202ENST00000391993 SS18Q15532 418 aa12.29□□□□□ -0.44
TRAF3IP1-202ENST00000391993 SMG1Q96Q15 3661 aaKnown RBP12.29□□□□□ -0.44
TRAF3IP1-202ENST00000391993 DEFB112Q30KQ8 113 aa12.29□□□□□ -0.44
TRAF3IP1-202ENST00000391993 Q6JHZ5 121 aa12.29□□□□□ -0.44
TRAF3IP1-202ENST00000391993 LMO4P61968 165 aa12.28□□□□□ -0.44
TRAF3IP1-202ENST00000391993 LOC100131303A0A0U1RQF7 123 aa12.28□□□□□ -0.44
TRAF3IP1-202ENST00000391993 RMI2Q96E14 147 aa12.28□□□□□ -0.44
TRAF3IP1-202ENST00000391993 JMJD7-PLA2G4BH0Y9G9 81 aa12.27□□□□□ -0.44
TRAF3IP1-202ENST00000391993 K7EQD1 137 aa12.27□□□□□ -0.44
TRAF3IP1-202ENST00000391993 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.27□□□□□ -0.44
TRAF3IP1-202ENST00000391993 CYSTM1Q9H1C7 97 aa12.27□□□□□ -0.44
TRAF3IP1-202ENST00000391993 NDUFC2O95298 119 aa12.26□□□□□ -0.45
TRAF3IP1-202ENST00000391993 MSMBP08118 114 aa12.26□□□□□ -0.45
TRAF3IP1-202ENST00000391993 C6orf99Q4VX62 202 aa12.26□□□□□ -0.45
TRAF3IP1-202ENST00000391993 PF4P02776 101 aa12.26□□□□□ -0.45
TRAF3IP1-202ENST00000391993 FHL2Q14192 279 aa12.26□□□□□ -0.45
TRAF3IP1-202ENST00000391993 RPL28P46779 137 aaKnown RBP12.25□□□□□ -0.45
TRAF3IP1-202ENST00000391993 C9orf129Q5T035 196 aaKnown RBP12.25□□□□□ -0.45
TRAF3IP1-202ENST00000391993 A8MTW9 85 aa12.24□□□□□ -0.45
TRAF3IP1-202ENST00000391993 K7EMT4 169 aa12.24□□□□□ -0.45
TRAF3IP1-202ENST00000391993 IGF2-ASQ6U949 168 aa12.24□□□□□ -0.45
TRAF3IP1-202ENST00000391993 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
TRAF3IP1-202ENST00000391993 TMEM256-PLSCR3K7ERE1 68 aa12.24□□□□□ -0.45
TRAF3IP1-202ENST00000391993 ANGP03950 147 aaKnown RBP12.24□□□□□ -0.45
TRAF3IP1-202ENST00000391993 PRR4Q16378 134 aa12.24□□□□□ -0.45
TRAF3IP1-202ENST00000391993 C19orf84I3L1E1 186 aa12.22□□□□□ -0.45
TRAF3IP1-202ENST00000391993 ADORA2A-AS1P86434 159 aa12.22□□□□□ -0.45
TRAF3IP1-202ENST00000391993 J3QLI3 93 aa12.21□□□□□ -0.45
TRAF3IP1-202ENST00000391993 V9GYY9 64 aa12.21□□□□□ -0.45
TRAF3IP1-202ENST00000391993 IGHV4-30-2A0A087WSY4 118 aa12.21□□□□□ -0.45
TRAF3IP1-202ENST00000391993 LAMA5O15230 3695 aa12.21□□□□□ -0.46
TRAF3IP1-202ENST00000391993 H3BUA1 57 aa12.21□□□□□ -0.46
TRAF3IP1-202ENST00000391993 CUBNO60494 3623 aa12.21□□□□□ -0.46
TRAF3IP1-202ENST00000391993 B4DSR2 109 aa12.21□□□□□ -0.46
TRAF3IP1-202ENST00000391993 FAM222AQ5U5X8 452 aa12.21□□□□□ -0.46
TRAF3IP1-202ENST00000391993 C18orf65Q6ZTR6 163 aa12.2□□□□□ -0.46
TRAF3IP1-202ENST00000391993 C1orf195Q5TG92 126 aa12.2□□□□□ -0.46
TRAF3IP1-202ENST00000391993 LINC01561Q8N1V8 128 aa12.2□□□□□ -0.46
TRAF3IP1-202ENST00000391993 CHD6Q8TD26 2715 aa12.2□□□□□ -0.46
TRAF3IP1-202ENST00000391993 LINC00269Q8N2A0 174 aa12.19□□□□□ -0.46
TRAF3IP1-202ENST00000391993 PRORYQ9H606 182 aa12.19□□□□□ -0.46
TRAF3IP1-202ENST00000391993 A0A1W2PPR1 153 aa12.18□□□□□ -0.46
TRAF3IP1-202ENST00000391993 RPS28P62857 69 aaKnown RBP12.18□□□□□ -0.46
TRAF3IP1-202ENST00000391993 CCKP06307 115 aa12.18□□□□□ -0.46
TRAF3IP1-202ENST00000391993 LINC00336Q6ZUF6 198 aa12.18□□□□□ -0.46
TRAF3IP1-202ENST00000391993 SPENQ96T58 3664 aaKnown RBP12.17□□□□□ -0.46
TRAF3IP1-202ENST00000391993 CDC42SE2Q9NRR3 84 aa12.17□□□□□ -0.46
TRAF3IP1-202ENST00000391993 C9orf116Q5BN46 136 aaPredicted RBP12.17□□□□□ -0.46
TRAF3IP1-202ENST00000391993 DEFB121Q5J5C9 76 aa12.17□□□□□ -0.46
TRAF3IP1-202ENST00000391993 NDUFC2-KCTD14E9PQ53 114 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms