RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 C22orf24Q9Y442 160 aa12.84□□□□□ -0.35
ERCC2-201ENST00000391941 HERVK_113P63121 156 aa12.83□□□□□ -0.35
ERCC2-201ENST00000391941 INSP01308 110 aa12.83□□□□□ -0.36
ERCC2-201ENST00000391941 BAALC-AS2P0C853 105 aa12.83□□□□□ -0.36
ERCC2-201ENST00000391941 COX7A2LO14548 114 aa12.83□□□□□ -0.36
ERCC2-201ENST00000391941 C1orf158Q8N1D5 194 aa12.83□□□□□ -0.36
ERCC2-201ENST00000391941 MRPL23Q16540 153 aaKnown RBP12.82□□□□□ -0.36
ERCC2-201ENST00000391941 Q6YL49 198 aa12.82□□□□□ -0.36
ERCC2-201ENST00000391941 ITPR3Q14573 2671 aa12.81□□□□□ -0.36
ERCC2-201ENST00000391941 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
ERCC2-201ENST00000391941 GAGE2AQ6NT46 116 aa12.81□□□□□ -0.36
ERCC2-201ENST00000391941 NOP10Q9NPE3 64 aaKnown RBP12.81□□□□□ -0.36
ERCC2-201ENST00000391941 ATP5G1P05496 136 aa12.81□□□□□ -0.36
ERCC2-201ENST00000391941 FLNAP21333 2647 aaKnown RBP12.8□□□□□ -0.36
ERCC2-201ENST00000391941 A0A096LNT2 108 aa12.8□□□□□ -0.36
ERCC2-201ENST00000391941 KRTAP10-9P60411 292 aa12.8□□□□□ -0.36
ERCC2-201ENST00000391941 DEFB114Q30KQ6 69 aa12.79□□□□□ -0.36
ERCC2-201ENST00000391941 PEMTQ9UBM1 199 aa12.79□□□□□ -0.36
ERCC2-201ENST00000391941 KLK5Q9Y337 293 aaPredicted RBP12.79□□□□□ -0.36
ERCC2-201ENST00000391941 F5H768 121 aa12.79□□□□□ -0.36
ERCC2-201ENST00000391941 PRB1P04280 392 aa12.79□□□□□ -0.36
ERCC2-201ENST00000391941 DSCR9P59020 149 aa12.79□□□□□ -0.36
ERCC2-201ENST00000391941 MIR7-3HGQ8N6C7 128 aa12.79□□□□□ -0.36
ERCC2-201ENST00000391941 LINC00337Q8N6G1 96 aa12.79□□□□□ -0.36
ERCC2-201ENST00000391941 A0A087WYN8 130 aa12.77□□□□□ -0.36
ERCC2-201ENST00000391941 J3QLI3 93 aa12.77□□□□□ -0.36
ERCC2-201ENST00000391941 PFN2P35080 140 aa12.77□□□□□ -0.36
ERCC2-201ENST00000391941 CDC42SE2Q9NRR3 84 aa12.77□□□□□ -0.36
ERCC2-201ENST00000391941 CR1P17927 2039 aa12.77□□□□□ -0.37
ERCC2-201ENST00000391941 TRBV7-7A0A0K0K1E9 115 aa12.77□□□□□ -0.37
ERCC2-201ENST00000391941 SLPIP03973 132 aa12.77□□□□□ -0.37
ERCC2-201ENST00000391941 STHQ8IWL8 128 aa12.77□□□□□ -0.37
ERCC2-201ENST00000391941 TRAV25A0A0B4J276 109 aa12.75□□□□□ -0.37
ERCC2-201ENST00000391941 RPL36AP83881 106 aaKnown RBP12.75□□□□□ -0.37
ERCC2-201ENST00000391941 RPL36ALQ969Q0 106 aaKnown RBP12.75□□□□□ -0.37
ERCC2-201ENST00000391941 IGKV2-28A0A075B6P5 120 aa12.75□□□□□ -0.37
ERCC2-201ENST00000391941 K7EQD1 137 aa12.75□□□□□ -0.37
ERCC2-201ENST00000391941 IGKV2D-28P01615 120 aa12.75□□□□□ -0.37
ERCC2-201ENST00000391941 RPL35AP18077 110 aaKnown RBP12.75□□□□□ -0.37
ERCC2-201ENST00000391941 IGLV4-60A0A075B6I1 120 aa12.74□□□□□ -0.37
ERCC2-201ENST00000391941 C14orf132Q9NPU4 83 aa12.74□□□□□ -0.37
ERCC2-201ENST00000391941 LINC00158P58513 81 aa12.74□□□□□ -0.37
ERCC2-201ENST00000391941 C5orf38Q86SI9 138 aa12.74□□□□□ -0.37
ERCC2-201ENST00000391941 C4orf3Q8WVX3 66 aa12.74□□□□□ -0.37
ERCC2-201ENST00000391941 FSHBP01225 129 aa12.73□□□□□ -0.37
ERCC2-201ENST00000391941 SDIM1Q6ZPB5 146 aa12.73□□□□□ -0.37
ERCC2-201ENST00000391941 FAM19A3Q7Z5A8 133 aa12.73□□□□□ -0.37
ERCC2-201ENST00000391941 UBE2L6O14933 153 aa12.73□□□□□ -0.37
ERCC2-201ENST00000391941 COPS9Q8WXC6 57 aa12.72□□□□□ -0.37
ERCC2-201ENST00000391941 CSDC2Q9Y534 153 aaKnown RBP12.72□□□□□ -0.37
ERCC2-201ENST00000391941 VWFP04275 2813 aa12.72□□□□□ -0.37
ERCC2-201ENST00000391941 CLPSL2Q6UWE3 100 aa12.72□□□□□ -0.37
ERCC2-201ENST00000391941 SND1-IT1Q9HBX3 110 aa12.72□□□□□ -0.37
ERCC2-201ENST00000391941 TRGV2A0A075B6R0 118 aa12.71□□□□□ -0.37
ERCC2-201ENST00000391941 IGKV3D-7A0A0C4DH55 119 aa12.71□□□□□ -0.37
ERCC2-201ENST00000391941 ACYP1P07311 99 aa12.71□□□□□ -0.37
ERCC2-201ENST00000391941 IL17DQ8TAD2 202 aa12.71□□□□□ -0.37
ERCC2-201ENST00000391941 TRACP01848 142 aa12.71□□□□□ -0.37
ERCC2-201ENST00000391941 IGHV4-31P0DP07 118 aa12.71□□□□□ -0.37
ERCC2-201ENST00000391941 SMIM11BQ8TCY0 68 aa12.71□□□□□ -0.38
ERCC2-201ENST00000391941 CRPP02741 224 aa12.69□□□□□ -0.38
ERCC2-201ENST00000391941 PRR3P79522 188 aaKnown RBP12.69□□□□□ -0.38
ERCC2-201ENST00000391941 A0A087WVE0 104 aa12.69□□□□□ -0.38
ERCC2-201ENST00000391941 TRBV10-1A0A0K0K1A3 114 aa12.69□□□□□ -0.38
ERCC2-201ENST00000391941 OR13C6PQ8NH95 151 aa12.69□□□□□ -0.38
ERCC2-201ENST00000391941 NCR3O14931 201 aa12.68□□□□□ -0.38
ERCC2-201ENST00000391941 HIST2H2BCQ6DN03 193 aa12.68□□□□□ -0.38
ERCC2-201ENST00000391941 PPDPFQ9H3Y8 114 aa12.68□□□□□ -0.38
ERCC2-201ENST00000391941 A0A096LPF7 62 aa12.68□□□□□ -0.38
ERCC2-201ENST00000391941 MALP21145 153 aa12.68□□□□□ -0.38
ERCC2-201ENST00000391941 CYSTM1Q9H1C7 97 aa12.68□□□□□ -0.38
ERCC2-201ENST00000391941 C9orf153Q5TBE3 101 aa12.67□□□□□ -0.38
ERCC2-201ENST00000391941 COX7B2Q8TF08 81 aa12.67□□□□□ -0.38
ERCC2-201ENST00000391941 TMEM243Q9BU79 118 aa12.67□□□□□ -0.38
ERCC2-201ENST00000391941 USP24Q9UPU5 2620 aa12.67□□□□□ -0.38
ERCC2-201ENST00000391941 LOC107984640A0A0U1RRK4 108 aa12.67□□□□□ -0.38
ERCC2-201ENST00000391941 CCL18P55774 89 aa12.67□□□□□ -0.38
ERCC2-201ENST00000391941 LINC00643Q86TS7 51 aa12.67□□□□□ -0.38
ERCC2-201ENST00000391941 LECT2O14960 151 aa12.66□□□□□ -0.38
ERCC2-201ENST00000391941 GIG44P09565 113 aaPredicted RBP12.66□□□□□ -0.38
ERCC2-201ENST00000391941 IMUPQ9GZP8 106 aa12.65□□□□□ -0.38
ERCC2-201ENST00000391941 PAX4O43316 350 aa12.65□□□□□ -0.38
ERCC2-201ENST00000391941 TRAV13-2A0A0B4J235 113 aa12.64□□□□□ -0.39
ERCC2-201ENST00000391941 RPL28P46779 137 aaKnown RBP12.63□□□□□ -0.39
ERCC2-201ENST00000391941 TRGV4A0A0C4DH28 118 aa12.63□□□□□ -0.39
ERCC2-201ENST00000391941 DNAL4O96015 105 aa12.63□□□□□ -0.39
ERCC2-201ENST00000391941 C5orf47Q569G3 176 aa12.63□□□□□ -0.39
ERCC2-201ENST00000391941 PLAC8L1A1L4L8 177 aa12.62□□□□□ -0.39
ERCC2-201ENST00000391941 DEFB130BP0DP73 79 aa12.62□□□□□ -0.39
ERCC2-201ENST00000391941 DEFB130AP0DP74 79 aa12.62□□□□□ -0.39
ERCC2-201ENST00000391941 XCL1P47992 114 aa12.62□□□□□ -0.39
ERCC2-201ENST00000391941 FAM222AQ5U5X8 452 aa12.62□□□□□ -0.39
ERCC2-201ENST00000391941 LINC00846Q9NV44 126 aa12.62□□□□□ -0.39
ERCC2-201ENST00000391941 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
ERCC2-201ENST00000391941 WFDC9Q8NEX5 89 aa12.61□□□□□ -0.39
ERCC2-201ENST00000391941 CCL24O00175 119 aa12.6□□□□□ -0.39
ERCC2-201ENST00000391941 PF4P02776 101 aa12.6□□□□□ -0.39
ERCC2-201ENST00000391941 RNASE1P07998 156 aaKnown RBP12.6□□□□□ -0.39
ERCC2-201ENST00000391941 INAFM2P0DMQ5 153 aa12.6□□□□□ -0.39
ERCC2-201ENST00000391941 HIVEP2P31629 2446 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms