RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 LINC00959A0A1B0GUT2 108 aa-1.87□□□□□ -2.71
SNORA40.3-201ENST00000390964 SERP1Q9Y6X1 66 aa-1.87□□□□□ -2.71
SNORA40.3-201ENST00000390964 MAGI1Q96QZ7 1491 aaPredicted RBP-1.88□□□□□ -2.71
SNORA40.3-201ENST00000390964 SETBP1Q9Y6X0 1596 aa-1.88□□□□□ -2.71
SNORA40.3-201ENST00000390964 RERGLQ9H628 205 aa-1.88□□□□□ -2.71
SNORA40.3-201ENST00000390964 C10orf113Q5VZT2 155 aa-1.89□□□□□ -2.71
SNORA40.3-201ENST00000390964 TSLPQ969D9 159 aa-1.89□□□□□ -2.71
SNORA40.3-201ENST00000390964 USMG5Q96IX5 58 aa-1.89□□□□□ -2.71
SNORA40.3-201ENST00000390964 SPRR4Q96PI1 79 aa-1.89□□□□□ -2.71
SNORA40.3-201ENST00000390964 DNAH6Q9C0G6 4158 aa-1.9□□□□□ -2.71
SNORA40.3-201ENST00000390964 MRPL54Q6P161 138 aaKnown RBP-1.9□□□□□ -2.71
SNORA40.3-201ENST00000390964 ZFHX3Q15911 3703 aa-1.91□□□□□ -2.71
SNORA40.3-201ENST00000390964 DR1Q01658 176 aa-1.91□□□□□ -2.72
SNORA40.3-201ENST00000390964 HMGXB3Q12766 1538 aa-1.91□□□□□ -2.72
SNORA40.3-201ENST00000390964 USH2AO75445 5202 aa-1.92□□□□□ -2.72
SNORA40.3-201ENST00000390964 ARHGEF5Q12774 1597 aa-1.92□□□□□ -2.72
SNORA40.3-201ENST00000390964 IFNGP01579 166 aa-1.92□□□□□ -2.72
SNORA40.3-201ENST00000390964 FAIMQ9NVQ4 179 aa-1.92□□□□□ -2.72
SNORA40.3-201ENST00000390964 FMN2Q9NZ56 1722 aa-1.92□□□□□ -2.72
SNORA40.3-201ENST00000390964 CPSF1Q10570 1443 aaKnown RBP-1.92□□□□□ -2.72
SNORA40.3-201ENST00000390964 ARPC4P59998 168 aa-1.93□□□□□ -2.72
SNORA40.3-201ENST00000390964 PPP3R2Q96LZ3 170 aa-1.93□□□□□ -2.72
SNORA40.3-201ENST00000390964 SNRNP25Q9BV90 132 aaKnown RBP-1.93□□□□□ -2.72
SNORA40.3-201ENST00000390964 SPANXDQ9BXN6 97 aa-1.93□□□□□ -2.72
SNORA40.3-201ENST00000390964 APLNQ9ULZ1 77 aa-1.93□□□□□ -2.72
SNORA40.3-201ENST00000390964 IGLC1P0CG04 106 aa-1.94□□□□□ -2.72
SNORA40.3-201ENST00000390964 PFDN5Q99471 154 aa-1.94□□□□□ -2.72
SNORA40.3-201ENST00000390964 NXT2Q9NPJ8 142 aaKnown RBP-1.94□□□□□ -2.72
SNORA40.3-201ENST00000390964 MYH7P12883 1935 aa-1.94□□□□□ -2.72
SNORA40.3-201ENST00000390964 SHROOM2Q13796 1616 aa-1.95□□□□□ -2.72
SNORA40.3-201ENST00000390964 SPTBN4Q9H254 2564 aa-1.95□□□□□ -2.72
SNORA40.3-201ENST00000390964 NBPF19A0A087WUL8 3843 aa-1.95□□□□□ -2.72
SNORA40.3-201ENST00000390964 TCHHQ07283 1943 aa-1.95□□□□□ -2.72
SNORA40.3-201ENST00000390964 WHAMMP3Q1A5X7 153 aa-1.95□□□□□ -2.72
SNORA40.3-201ENST00000390964 NAA60Q9H7X0 242 aa-1.95□□□□□ -2.72
SNORA40.3-201ENST00000390964 EPG5Q9HCE0 2579 aa-1.96□□□□□ -2.72
SNORA40.3-201ENST00000390964 SMG6Q86US8 1419 aaKnown RBP-1.96□□□□□ -2.72
SNORA40.3-201ENST00000390964 UBA52P62987 128 aaKnown RBP-1.96□□□□□ -2.72
SNORA40.3-201ENST00000390964 PAPPA2Q9BXP8 1791 aa-1.96□□□□□ -2.72
SNORA40.3-201ENST00000390964 HIVEP1P15822 2718 aa-1.97□□□□□ -2.72
SNORA40.3-201ENST00000390964 LINC01600Q96MT4 127 aa-1.97□□□□□ -2.72
SNORA40.3-201ENST00000390964 TET3O43151 1660 aa-1.97□□□□□ -2.73
SNORA40.3-201ENST00000390964 CPSF4LA6NMK7 179 aaKnown RBP-1.98□□□□□ -2.73
SNORA40.3-201ENST00000390964 SSSCA1O60232 199 aa-1.98□□□□□ -2.73
SNORA40.3-201ENST00000390964 FDCSPQ8NFU4 85 aa-1.98□□□□□ -2.73
SNORA40.3-201ENST00000390964 MYOZ3Q8TDC0 251 aa-1.98□□□□□ -2.73
SNORA40.3-201ENST00000390964 FAM167A-AS1Q96KT0 104 aa-1.98□□□□□ -2.73
SNORA40.3-201ENST00000390964 PAIP2BQ9ULR5 123 aaKnown RBP-1.98□□□□□ -2.73
SNORA40.3-201ENST00000390964 A0A0G2JMZ2 1700 aa-1.98□□□□□ -2.73
SNORA40.3-201ENST00000390964 PKD1P98161 4303 aa-1.98□□□□□ -2.73
SNORA40.3-201ENST00000390964 UBR4Q5T4S7 5183 aa-1.99□□□□□ -2.73
SNORA40.3-201ENST00000390964 COMMD6Q7Z4G1 85 aa-1.99□□□□□ -2.73
SNORA40.3-201ENST00000390964 CDC42SE2Q9NRR3 84 aa-1.99□□□□□ -2.73
SNORA40.3-201ENST00000390964 CHKB-CPT1BH3BT56 60 aa-2□□□□□ -2.73
SNORA40.3-201ENST00000390964 DEFB112Q30KQ8 113 aa-2□□□□□ -2.73
SNORA40.3-201ENST00000390964 Q56UQ5 140 aa-2□□□□□ -2.73
SNORA40.3-201ENST00000390964 FAM223AQ8IWN6 122 aa-2□□□□□ -2.73
SNORA40.3-201ENST00000390964 C8orf59Q8N0T1 100 aaPredicted RBP-2□□□□□ -2.73
SNORA40.3-201ENST00000390964 SONP18583 2426 aaKnown RBP-2.01□□□□□ -2.73
SNORA40.3-201ENST00000390964 MIF4GDA9UHW6 222 aaKnown RBP-2.01□□□□□ -2.73
SNORA40.3-201ENST00000390964 MEIG1Q5JSS6 88 aa-2.01□□□□□ -2.73
SNORA40.3-201ENST00000390964 PRO1933Q9H354 126 aa-2.01□□□□□ -2.73
SNORA40.3-201ENST00000390964 UQCR10Q9UDW1 63 aa-2.01□□□□□ -2.73
SNORA40.3-201ENST00000390964 C1orf167Q5SNV9 1468 aa-2.01□□□□□ -2.73
SNORA40.3-201ENST00000390964 BTG2P78543 158 aa-2.02□□□□□ -2.73
SNORA40.3-201ENST00000390964 C5orf38Q86SI9 138 aa-2.02□□□□□ -2.73
SNORA40.3-201ENST00000390964 TACC2O95359 2948 aa-2.02□□□□□ -2.73
SNORA40.3-201ENST00000390964 FAT3Q8TDW7 4589 aa-2.02□□□□□ -2.73
SNORA40.3-201ENST00000390964 PHLPP1O60346 1717 aa-2.03□□□□□ -2.73
SNORA40.3-201ENST00000390964 XRN1Q8IZH2 1706 aaKnown RBP-2.03□□□□□ -2.73
SNORA40.3-201ENST00000390964 C9orf62Q8N4C0 152 aa-2.03□□□□□ -2.73
SNORA40.3-201ENST00000390964 LINC00474Q9P2X8 69 aa-2.03□□□□□ -2.73
SNORA40.3-201ENST00000390964 ARL2-SNX15V9GYD0 113 aa-2.03□□□□□ -2.73
SNORA40.3-201ENST00000390964 FOCADQ5VW36 1801 aa-2.03□□□□□ -2.73
SNORA40.3-201ENST00000390964 SPG11Q96JI7 2443 aa-2.03□□□□□ -2.74
SNORA40.3-201ENST00000390964 SELENOWP63302 87 aa-2.04□□□□□ -2.74
SNORA40.3-201ENST00000390964 CATR1Q13166 79 aa-2.04□□□□□ -2.74
SNORA40.3-201ENST00000390964 EHBP1L1Q8N3D4 1523 aa-2.04□□□□□ -2.74
SNORA40.3-201ENST00000390964 ARL11Q969Q4 196 aa-2.04□□□□□ -2.74
SNORA40.3-201ENST00000390964 NBASA2RRP1 2371 aa-2.05□□□□□ -2.74
SNORA40.3-201ENST00000390964 QRICH2Q9H0J4 1663 aa-2.05□□□□□ -2.74
SNORA40.3-201ENST00000390964 CCDC141Q6ZP82 1450 aa-2.05□□□□□ -2.74
SNORA40.3-201ENST00000390964 APOC2P02655 101 aa-2.05□□□□□ -2.74
SNORA40.3-201ENST00000390964 HTTP42858 3142 aa-2.05□□□□□ -2.74
SNORA40.3-201ENST00000390964 FAM25AB3EWG3 89 aa-2.06□□□□□ -2.74
SNORA40.3-201ENST00000390964 FAM25CB3EWG5 89 aa-2.06□□□□□ -2.74
SNORA40.3-201ENST00000390964 FAM25GB3EWG6 89 aa-2.06□□□□□ -2.74
SNORA40.3-201ENST00000390964 H1FX-AS1Q4G0G2 97 aa-2.06□□□□□ -2.74
SNORA40.3-201ENST00000390964 LCN9Q8WX39 176 aa-2.06□□□□□ -2.74
SNORA40.3-201ENST00000390964 LINC00470Q9BZP3 86 aa-2.06□□□□□ -2.74
SNORA40.3-201ENST00000390964 ROBO1Q9Y6N7 1651 aa-2.06□□□□□ -2.74
SNORA40.3-201ENST00000390964 SCN7AQ01118 1682 aa-2.07□□□□□ -2.74
SNORA40.3-201ENST00000390964 NUP188Q5SRE5 1749 aa-2.08□□□□□ -2.74
SNORA40.3-201ENST00000390964 USP9YO00507 2555 aaPredicted RBP-2.08□□□□□ -2.74
SNORA40.3-201ENST00000390964 SPRR2FQ96RM1 72 aa-2.08□□□□□ -2.74
SNORA40.3-201ENST00000390964 NKTRP30414 1462 aaKnown RBP-2.08□□□□□ -2.74
SNORA40.3-201ENST00000390964 NAIPQ13075 1403 aa-2.08□□□□□ -2.74
SNORA40.3-201ENST00000390964 ANKHD1Q8IWZ3 2542 aaKnown RBP-2.09□□□□□ -2.74
SNORA40.3-201ENST00000390964 LOC100130705A0A1B0GUX0 176 aa-2.09□□□□□ -2.74
SNORA40.3-201ENST00000390964 ADGRL2O95490 1459 aa-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms