RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 A0A0U1RQV1 116 aa10.39□□□□□ -0.75
RTF1-201ENST00000389629 LINC00242Q5T6M2 205 aa10.39□□□□□ -0.75
RTF1-201ENST00000389629 SNURFQ9Y675 71 aa10.39□□□□□ -0.75
RTF1-201ENST00000389629 LINC00315P59091 139 aa10.38□□□□□ -0.75
RTF1-201ENST00000389629 SBSPONQ8IVN8 264 aa10.38□□□□□ -0.75
RTF1-201ENST00000389629 MPLKIPQ8TAP9 179 aa10.38□□□□□ -0.75
RTF1-201ENST00000389629 FREM2Q5SZK8 3169 aa10.38□□□□□ -0.75
RTF1-201ENST00000389629 CSDC2Q9Y534 153 aaKnown RBP10.38□□□□□ -0.75
RTF1-201ENST00000389629 FRYLO94915 3013 aa10.37□□□□□ -0.75
RTF1-201ENST00000389629 DPH3Q96FX2 82 aa10.37□□□□□ -0.75
RTF1-201ENST00000389629 HIVEP2P31629 2446 aa10.37□□□□□ -0.75
RTF1-201ENST00000389629 WFDC11Q8NEX6 87 aa10.36□□□□□ -0.75
RTF1-201ENST00000389629 C16orf74Q96GX8 76 aa10.36□□□□□ -0.75
RTF1-201ENST00000389629 AMELXQ99217 191 aa10.36□□□□□ -0.75
RTF1-201ENST00000389629 ABCA12Q86UK0 2595 aa10.36□□□□□ -0.75
RTF1-201ENST00000389629 TRBV7-7A0A0K0K1E9 115 aa10.35□□□□□ -0.75
RTF1-201ENST00000389629 SPTBN4Q9H254 2564 aa10.35□□□□□ -0.75
RTF1-201ENST00000389629 AVPP01185 164 aa10.34□□□□□ -0.75
RTF1-201ENST00000389629 NHLRC4P0CG21 123 aaPredicted RBP10.34□□□□□ -0.75
RTF1-201ENST00000389629 C18orf65Q6ZTR6 163 aa10.34□□□□□ -0.75
RTF1-201ENST00000389629 CHCHD7Q9BUK0 85 aa10.34□□□□□ -0.75
RTF1-201ENST00000389629 A0A087WYN8 130 aa10.34□□□□□ -0.75
RTF1-201ENST00000389629 SMIM1B2RUZ4 78 aa10.34□□□□□ -0.75
RTF1-201ENST00000389629 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
RTF1-201ENST00000389629 NREPQ16612 68 aa10.34□□□□□ -0.75
RTF1-201ENST00000389629 C6orf99Q4VX62 202 aa10.34□□□□□ -0.75
RTF1-201ENST00000389629 FRYQ5TBA9 3013 aa10.34□□□□□ -0.75
RTF1-201ENST00000389629 CCL18P55774 89 aa10.33□□□□□ -0.76
RTF1-201ENST00000389629 Q6JHZ5 121 aa10.33□□□□□ -0.76
RTF1-201ENST00000389629 DEFB114Q30KQ6 69 aa10.33□□□□□ -0.76
RTF1-201ENST00000389629 Q6ZSN1 163 aa10.33□□□□□ -0.76
RTF1-201ENST00000389629 NKAPP1Q8N9T2 125 aa10.33□□□□□ -0.76
RTF1-201ENST00000389629 C4orf3Q8WVX3 66 aa10.33□□□□□ -0.76
RTF1-201ENST00000389629 LOC100131303A0A0U1RQF7 123 aa10.32□□□□□ -0.76
RTF1-201ENST00000389629 NDUFC2O95298 119 aa10.32□□□□□ -0.76
RTF1-201ENST00000389629 FAM222AQ5U5X8 452 aa10.32□□□□□ -0.76
RTF1-201ENST00000389629 Q8N2B8 174 aa10.32□□□□□ -0.76
RTF1-201ENST00000389629 DEFB4AO15263 64 aa10.32□□□□□ -0.76
RTF1-201ENST00000389629 LINC00269Q8N2A0 174 aa10.31□□□□□ -0.76
RTF1-201ENST00000389629 F8WEM9 126 aa10.31□□□□□ -0.76
RTF1-201ENST00000389629 ATP5EP2Q5VTU8 51 aa10.31□□□□□ -0.76
RTF1-201ENST00000389629 LINC00846Q9NV44 126 aa10.31□□□□□ -0.76
RTF1-201ENST00000389629 MGAQ8IWI9 3026 aa10.31□□□□□ -0.76
RTF1-201ENST00000389629 SPAG11BQ08648 103 aa10.3□□□□□ -0.76
RTF1-201ENST00000389629 COL27A1Q8IZC6 1860 aaPredicted RBP10.3□□□□□ -0.76
RTF1-201ENST00000389629 POLQO75417 2590 aa10.3□□□□□ -0.76
RTF1-201ENST00000389629 REV3LO60673 3130 aa10.3□□□□□ -0.76
RTF1-201ENST00000389629 FAM19A4Q96LR4 140 aa10.29□□□□□ -0.76
RTF1-201ENST00000389629 CDC42SE2Q9NRR3 84 aa10.29□□□□□ -0.76
RTF1-201ENST00000389629 MYO15AQ9UKN7 3530 aa10.29□□□□□ -0.76
RTF1-201ENST00000389629 JMJD1CQ15652 2540 aa10.29□□□□□ -0.76
RTF1-201ENST00000389629 RPL28P46779 137 aaKnown RBP10.28□□□□□ -0.76
RTF1-201ENST00000389629 DIRC1Q969H9 104 aa10.28□□□□□ -0.76
RTF1-201ENST00000389629 PIEZO1Q92508 2521 aa10.28□□□□□ -0.76
RTF1-201ENST00000389629 Q9UF83 564 aa10.28□□□□□ -0.76
RTF1-201ENST00000389629 Q6YL49 198 aa10.27□□□□□ -0.76
RTF1-201ENST00000389629 HILS1P60008 231 aa10.27□□□□□ -0.77
RTF1-201ENST00000389629 PRR3P79522 188 aaKnown RBP10.27□□□□□ -0.77
RTF1-201ENST00000389629 CAMK2N2Q96S95 79 aa10.27□□□□□ -0.77
RTF1-201ENST00000389629 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
RTF1-201ENST00000389629 FAM19A1Q7Z5A9 133 aa10.26□□□□□ -0.77
RTF1-201ENST00000389629 ZNF702PQ9H963 129 aa10.26□□□□□ -0.77
RTF1-201ENST00000389629 EYSQ5T1H1 3165 aa10.26□□□□□ -0.77
RTF1-201ENST00000389629 KLK12Q9UKR0 248 aa10.26□□□□□ -0.77
RTF1-201ENST00000389629 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
RTF1-201ENST00000389629 FUSP35637 526 aaKnown RBP eCLIP10.25□□□□□ -0.77
RTF1-201ENST00000389629 Q6ZQY7 126 aa10.25□□□□□ -0.77
RTF1-201ENST00000389629 XAGE1AQ9HD64 81 aa10.25□□□□□ -0.77
RTF1-201ENST00000389629 HIGD2BQ4VC39 106 aa10.25□□□□□ -0.77
RTF1-201ENST00000389629 CCKP06307 115 aa10.24□□□□□ -0.77
RTF1-201ENST00000389629 LINC00337Q8N6G1 96 aa10.24□□□□□ -0.77
RTF1-201ENST00000389629 MTORP42345 2549 aa10.24□□□□□ -0.77
RTF1-201ENST00000389629 NDUFC2-KCTD14E9PQ53 114 aa10.23□□□□□ -0.77
RTF1-201ENST00000389629 PDE6GP18545 87 aa10.23□□□□□ -0.77
RTF1-201ENST00000389629 DEFB113Q30KQ7 82 aa10.23□□□□□ -0.77
RTF1-201ENST00000389629 FAM218AQ96MZ4 157 aa10.23□□□□□ -0.77
RTF1-201ENST00000389629 BRI3O95415 125 aa10.23□□□□□ -0.77
RTF1-201ENST00000389629 ZNF575Q86XF7 245 aa10.23□□□□□ -0.77
RTF1-201ENST00000389629 CHCHD10Q8WYQ3 142 aaPredicted RBP10.23□□□□□ -0.77
RTF1-201ENST00000389629 SPTBN5Q9NRC6 3674 aaKnown RBP10.23□□□□□ -0.77
RTF1-201ENST00000389629 COX7BP24311 80 aa10.22□□□□□ -0.77
RTF1-201ENST00000389629 WFDC10AQ9H1F0 79 aa10.22□□□□□ -0.77
RTF1-201ENST00000389629 BPY2O14599 106 aa10.21□□□□□ -0.77
RTF1-201ENST00000389629 SOSTDC1Q6X4U4 206 aa10.21□□□□□ -0.77
RTF1-201ENST00000389629 PRO0255Q9UI72 69 aa10.21□□□□□ -0.78
RTF1-201ENST00000389629 REG3AQ06141 175 aa10.21□□□□□ -0.78
RTF1-201ENST00000389629 MUC4Q99102 2169 aa10.21□□□□□ -0.78
RTF1-201ENST00000389629 IGKV2D-24A0A075B6R9 120 aa10.2□□□□□ -0.78
RTF1-201ENST00000389629 LINC00959A0A1B0GUT2 108 aa10.2□□□□□ -0.78
RTF1-201ENST00000389629 IGHV4-31P0DP07 118 aa10.2□□□□□ -0.78
RTF1-201ENST00000389629 TRBV6-4A0A1B0GX49 114 aa10.19□□□□□ -0.78
RTF1-201ENST00000389629 EIF4EBP3O60516 100 aaPredicted RBP10.19□□□□□ -0.78
RTF1-201ENST00000389629 C4orf26Q17RF5 130 aa10.19□□□□□ -0.78
RTF1-201ENST00000389629 IGLV4-60A0A075B6I1 120 aa10.19□□□□□ -0.78
RTF1-201ENST00000389629 CRYGAP11844 174 aa10.19□□□□□ -0.78
RTF1-201ENST00000389629 SMCR5Q8TEV8 140 aa10.19□□□□□ -0.78
RTF1-201ENST00000389629 LITAFQ99732 161 aa10.19□□□□□ -0.78
RTF1-201ENST00000389629 DEFB135Q30KP9 77 aa10.18□□□□□ -0.78
RTF1-201ENST00000389629 ODF3L2Q3SX64 289 aa10.18□□□□□ -0.78
RTF1-201ENST00000389629 C9orf116Q5BN46 136 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms