RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 NDUFA7O95182 113 aa12.55□□□□□ -0.4
SGCB-201ENST00000381431 FAM110AQ9BQ89 295 aa12.54□□□□□ -0.4
SGCB-201ENST00000381431 ODF3L2Q3SX64 289 aa12.53□□□□□ -0.4
SGCB-201ENST00000381431 IBA57-AS1B1ANH7 110 aa12.53□□□□□ -0.4
SGCB-201ENST00000381431 CHD9Q3L8U1 2897 aa12.51□□□□□ -0.41
SGCB-201ENST00000381431 LYRM9A8MSI8 78 aa12.51□□□□□ -0.41
SGCB-201ENST00000381431 PRB2P02812 416 aaPredicted RBP12.51□□□□□ -0.41
SGCB-201ENST00000381431 UFSP1Q6NVU6 142 aa12.51□□□□□ -0.41
SGCB-201ENST00000381431 SDIM1Q6ZPB5 146 aa12.51□□□□□ -0.41
SGCB-201ENST00000381431 SMIM9A6NGZ8 99 aa12.51□□□□□ -0.41
SGCB-201ENST00000381431 NDUFV3P56181 108 aaKnown RBP12.51□□□□□ -0.41
SGCB-201ENST00000381431 COX8CQ7Z4L0 72 aa12.51□□□□□ -0.41
SGCB-201ENST00000381431 TRAV23DV6A0A075B6W5 121 aa12.5□□□□□ -0.41
SGCB-201ENST00000381431 C6orf99Q4VX62 202 aa12.5□□□□□ -0.41
SGCB-201ENST00000381431 CRIP2P52943 208 aaPredicted RBP12.49□□□□□ -0.41
SGCB-201ENST00000381431 ZNF580Q9UK33 172 aa12.49□□□□□ -0.41
SGCB-201ENST00000381431 COX7BP24311 80 aa12.49□□□□□ -0.41
SGCB-201ENST00000381431 IGKV2-24A0A0C4DH68 120 aa12.49□□□□□ -0.41
SGCB-201ENST00000381431 MRPS36P82909 103 aaKnown RBP12.49□□□□□ -0.41
SGCB-201ENST00000381431 UBE2D1P51668 147 aa12.48□□□□□ -0.41
SGCB-201ENST00000381431 TSPEAR-AS2P59090 65 aa12.48□□□□□ -0.41
SGCB-201ENST00000381431 C11orf45Q8TAV5 145 aa12.48□□□□□ -0.41
SGCB-201ENST00000381431 SZT2Q5T011 3432 aa12.48□□□□□ -0.41
SGCB-201ENST00000381431 PTPRBP23467 1997 aa12.47□□□□□ -0.41
SGCB-201ENST00000381431 IGLV4-69A0A075B6H9 119 aa12.47□□□□□ -0.41
SGCB-201ENST00000381431 H7C423 109 aa12.46□□□□□ -0.41
SGCB-201ENST00000381431 LINC00242Q5T6M2 205 aa12.46□□□□□ -0.41
SGCB-201ENST00000381431 HECTD1Q9ULT8 2610 aa12.46□□□□□ -0.41
SGCB-201ENST00000381431 IGLV2-18A0A075B6J9 118 aa12.46□□□□□ -0.41
SGCB-201ENST00000381431 USP34Q70CQ2 3546 aa12.46□□□□□ -0.41
SGCB-201ENST00000381431 LST1O00453 97 aa12.45□□□□□ -0.42
SGCB-201ENST00000381431 XGP55808 180 aa12.45□□□□□ -0.42
SGCB-201ENST00000381431 CDC42SE2Q9NRR3 84 aa12.45□□□□□ -0.42
SGCB-201ENST00000381431 NDUFS5O43920 106 aa12.44□□□□□ -0.42
SGCB-201ENST00000381431 DEFB131BA0A096LNP1 70 aa12.44□□□□□ -0.42
SGCB-201ENST00000381431 LINC00959A0A1B0GUT2 108 aa12.44□□□□□ -0.42
SGCB-201ENST00000381431 TIMM17BO60830 172 aa12.44□□□□□ -0.42
SGCB-201ENST00000381431 SMR3AQ99954 134 aa12.44□□□□□ -0.42
SGCB-201ENST00000381431 UBE2D3P61077 147 aa12.44□□□□□ -0.42
SGCB-201ENST00000381431 UBE2D2P62837 147 aa12.44□□□□□ -0.42
SGCB-201ENST00000381431 LY6G6DO95868 133 aa12.43□□□□□ -0.42
SGCB-201ENST00000381431 SCXQ7RTU7 201 aa12.43□□□□□ -0.42
SGCB-201ENST00000381431 MGAM2Q2M2H8 2515 aa12.43□□□□□ -0.42
SGCB-201ENST00000381431 ATRQ13535 2644 aa12.43□□□□□ -0.42
SGCB-201ENST00000381431 LINC00694P0DN24 101 aa12.42□□□□□ -0.42
SGCB-201ENST00000381431 HIGD2AQ9BW72 106 aa12.42□□□□□ -0.42
SGCB-201ENST00000381431 MIFP14174 115 aa12.41□□□□□ -0.42
SGCB-201ENST00000381431 C1orf158Q8N1D5 194 aa12.4□□□□□ -0.42
SGCB-201ENST00000381431 C20orf197Q8N268 126 aa12.4□□□□□ -0.42
SGCB-201ENST00000381431 HILS1P60008 231 aa12.4□□□□□ -0.42
SGCB-201ENST00000381431 SMIM11BQ8TCY0 68 aa12.4□□□□□ -0.42
SGCB-201ENST00000381431 A0A096LNI7 61 aa12.4□□□□□ -0.42
SGCB-201ENST00000381431 CD164L2Q6UWJ8 174 aa12.4□□□□□ -0.42
SGCB-201ENST00000381431 UBE2AP49459 152 aa12.4□□□□□ -0.43
SGCB-201ENST00000381431 UPK3BQ9BT76 320 aa12.39□□□□□ -0.43
SGCB-201ENST00000381431 Q6ZSN1 163 aa12.39□□□□□ -0.43
SGCB-201ENST00000381431 PDE6GP18545 87 aa12.38□□□□□ -0.43
SGCB-201ENST00000381431 ADAMTSL4-AS1Q5T5F5 129 aa12.38□□□□□ -0.43
SGCB-201ENST00000381431 Q6ZQY7 126 aa12.38□□□□□ -0.43
SGCB-201ENST00000381431 WDFY4Q6ZS81 3184 aa12.38□□□□□ -0.43
SGCB-201ENST00000381431 COX6A2Q02221 97 aa12.38□□□□□ -0.43
SGCB-201ENST00000381431 CHCHD7Q9BUK0 85 aa12.38□□□□□ -0.43
SGCB-201ENST00000381431 SMIM1B2RUZ4 78 aa12.38□□□□□ -0.43
SGCB-201ENST00000381431 H3BQ85 93 aa12.37□□□□□ -0.43
SGCB-201ENST00000381431 ENHOQ6UWT2 76 aa12.37□□□□□ -0.43
SGCB-201ENST00000381431 MAST4O15021 2626 aa12.36□□□□□ -0.43
SGCB-201ENST00000381431 CLUHP3Q96NS8 147 aa12.36□□□□□ -0.43
SGCB-201ENST00000381431 BPY2O14599 106 aa12.36□□□□□ -0.43
SGCB-201ENST00000381431 SPATA25Q9BR10 227 aa12.36□□□□□ -0.43
SGCB-201ENST00000381431 IGLV4-60A0A075B6I1 120 aa12.36□□□□□ -0.43
SGCB-201ENST00000381431 TMEM258P61165 79 aa12.35□□□□□ -0.43
SGCB-201ENST00000381431 KPRPQ5T749 579 aaPredicted RBP12.35□□□□□ -0.43
SGCB-201ENST00000381431 OXLD1Q5BKU9 147 aa12.34□□□□□ -0.43
SGCB-201ENST00000381431 IGKV2-28A0A075B6P5 120 aa12.34□□□□□ -0.43
SGCB-201ENST00000381431 IGKV2D-28P01615 120 aa12.34□□□□□ -0.43
SGCB-201ENST00000381431 SYCNQ0VAF6 134 aa12.34□□□□□ -0.43
SGCB-201ENST00000381431 J3KT08 172 aa12.33□□□□□ -0.44
SGCB-201ENST00000381431 BRI3O95415 125 aa12.33□□□□□ -0.44
SGCB-201ENST00000381431 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
SGCB-201ENST00000381431 PLA2G2AP14555 144 aa12.32□□□□□ -0.44
SGCB-201ENST00000381431 UQCRQO14949 82 aa12.32□□□□□ -0.44
SGCB-201ENST00000381431 C9orf116Q5BN46 136 aaPredicted RBP12.32□□□□□ -0.44
SGCB-201ENST00000381431 AMELXQ99217 191 aa12.32□□□□□ -0.44
SGCB-201ENST00000381431 NDUFB1O75438 58 aa12.31□□□□□ -0.44
SGCB-201ENST00000381431 IGLV1-51P01701 117 aa12.31□□□□□ -0.44
SGCB-201ENST00000381431 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.31□□□□□ -0.44
SGCB-201ENST00000381431 MP68P56378 58 aa12.31□□□□□ -0.44
SGCB-201ENST00000381431 PRR3P79522 188 aaKnown RBP12.31□□□□□ -0.44
SGCB-201ENST00000381431 UNQ6190/PRO20217Q6UXQ8 127 aa12.31□□□□□ -0.44
SGCB-201ENST00000381431 LELP1Q5T871 98 aa12.3□□□□□ -0.44
SGCB-201ENST00000381431 CCKP06307 115 aa12.3□□□□□ -0.44
SGCB-201ENST00000381431 MGAQ8IWI9 3026 aa12.3□□□□□ -0.44
SGCB-201ENST00000381431 MYO15AQ9UKN7 3530 aa12.3□□□□□ -0.44
SGCB-201ENST00000381431 CYSRT1A8MQ03 144 aa12.29□□□□□ -0.44
SGCB-201ENST00000381431 FAM19A5Q7Z5A7 132 aaPredicted RBP12.29□□□□□ -0.44
SGCB-201ENST00000381431 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.29□□□□□ -0.44
SGCB-201ENST00000381431 WFDC9Q8NEX5 89 aa12.29□□□□□ -0.44
SGCB-201ENST00000381431 C3orf84H3BNL1 204 aa12.28□□□□□ -0.44
SGCB-201ENST00000381431 IGHV4-30-4P0DP06 118 aa12.28□□□□□ -0.44
SGCB-201ENST00000381431 MAP1AP78559 2803 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms