RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 CDIP1Q9H305 208 aa14.18□□□□□ -0.14
EBF1-202ENST00000380654 NBEAL2Q6ZNJ1 2754 aa14.18□□□□□ -0.14
EBF1-202ENST00000380654 UBE2L6O14933 153 aa14.18□□□□□ -0.14
EBF1-202ENST00000380654 TRGV4A0A0C4DH28 118 aa14.17□□□□□ -0.14
EBF1-202ENST00000380654 ATXN8Q156A1 80 aa14.17□□□□□ -0.14
EBF1-202ENST00000380654 F5H768 121 aa14.16□□□□□ -0.14
EBF1-202ENST00000380654 J3QKU1 62 aa14.16□□□□□ -0.14
EBF1-202ENST00000380654 LINC01620Q4KN68 170 aa14.16□□□□□ -0.14
EBF1-202ENST00000380654 OVOL2Q9BRP0 275 aa14.16□□□□□ -0.14
EBF1-202ENST00000380654 KMT2BQ9UMN6 2715 aaPredicted RBP14.16□□□□□ -0.14
EBF1-202ENST00000380654 TRBV6-4A0A1B0GX49 114 aa14.15□□□□□ -0.14
EBF1-202ENST00000380654 RPL13AP40429 203 aaKnown RBP14.15□□□□□ -0.14
EBF1-202ENST00000380654 IFITM1P13164 125 aa14.14□□□□□ -0.15
EBF1-202ENST00000380654 CIRBPQ14011 172 aaKnown RBP14.14□□□□□ -0.15
EBF1-202ENST00000380654 LINC00308Q8TCZ7 52 aa14.14□□□□□ -0.15
EBF1-202ENST00000380654 GAGE6Q13070 117 aa14.14□□□□□ -0.15
EBF1-202ENST00000380654 FHL2Q14192 279 aa14.14□□□□□ -0.15
EBF1-202ENST00000380654 CLEC2BQ92478 149 aa14.14□□□□□ -0.15
EBF1-202ENST00000380654 IGKV3OR2-268A0A0C4DH90 116 aa14.13□□□□□ -0.15
EBF1-202ENST00000380654 PRIMA1Q86XR5 153 aa14.13□□□□□ -0.15
EBF1-202ENST00000380654 SOSTDC1Q6X4U4 206 aa14.13□□□□□ -0.15
EBF1-202ENST00000380654 RNF183Q96D59 192 aa14.13□□□□□ -0.15
EBF1-202ENST00000380654 HECTD1Q9ULT8 2610 aa14.13□□□□□ -0.15
EBF1-202ENST00000380654 IGLV4-60A0A075B6I1 120 aa14.11□□□□□ -0.15
EBF1-202ENST00000380654 DEFB130BP0DP73 79 aa14.11□□□□□ -0.15
EBF1-202ENST00000380654 DEFB130AP0DP74 79 aa14.11□□□□□ -0.15
EBF1-202ENST00000380654 MEIG1Q5JSS6 88 aa14.1□□□□□ -0.15
EBF1-202ENST00000380654 NTN5Q8WTR8 489 aaPredicted RBP14.1□□□□□ -0.15
EBF1-202ENST00000380654 PF4P02776 101 aa14.1□□□□□ -0.15
EBF1-202ENST00000380654 NOTCH2Q04721 2471 aa14.09□□□□□ -0.15
EBF1-202ENST00000380654 OTOGQ6ZRI0 2925 aa14.09□□□□□ -0.15
EBF1-202ENST00000380654 M0QXV9 152 aa14.09□□□□□ -0.15
EBF1-202ENST00000380654 SPATA3Q8NHX4 192 aa14.09□□□□□ -0.15
EBF1-202ENST00000380654 CRLF1O75462 422 aa14.08□□□□□ -0.16
EBF1-202ENST00000380654 TRBV6-8A0A0A6YYG3 113 aa14.08□□□□□ -0.16
EBF1-202ENST00000380654 TRBV10-2A0A0K0K1G8 114 aa14.08□□□□□ -0.16
EBF1-202ENST00000380654 MT-ATP8P03928 68 aa14.08□□□□□ -0.16
EBF1-202ENST00000380654 COX6CP09669 75 aa14.08□□□□□ -0.16
EBF1-202ENST00000380654 XGP55808 180 aa14.08□□□□□ -0.16
EBF1-202ENST00000380654 TEX49A0A1B0GTD5 131 aa14.07□□□□□ -0.16
EBF1-202ENST00000380654 SCGB1A1P11684 91 aa14.07□□□□□ -0.16
EBF1-202ENST00000380654 LINC00482Q8N8I6 264 aa14.07□□□□□ -0.16
EBF1-202ENST00000380654 CHCHD5Q9BSY4 110 aa14.07□□□□□ -0.16
EBF1-202ENST00000380654 H7C423 109 aa14.07□□□□□ -0.16
EBF1-202ENST00000380654 TENM1Q9UKZ4 2725 aa14.06□□□□□ -0.16
EBF1-202ENST00000380654 CIDEAO60543 219 aa14.06□□□□□ -0.16
EBF1-202ENST00000380654 LST1O00453 97 aa14.04□□□□□ -0.16
EBF1-202ENST00000380654 TOMM7Q9P0U1 55 aa14.04□□□□□ -0.16
EBF1-202ENST00000380654 LY6G6DO95868 133 aa14.04□□□□□ -0.16
EBF1-202ENST00000380654 C2orf82Q6UX34 121 aa14.04□□□□□ -0.16
EBF1-202ENST00000380654 HERV-K104P63124 156 aa14.02□□□□□ -0.16
EBF1-202ENST00000380654 COX7B2Q8TF08 81 aa14.02□□□□□ -0.17
EBF1-202ENST00000380654 LINC01600Q96MT4 127 aa14.01□□□□□ -0.17
EBF1-202ENST00000380654 X6R8D5 127 aa14.01□□□□□ -0.17
EBF1-202ENST00000380654 GYPEP15421 78 aa14□□□□□ -0.17
EBF1-202ENST00000380654 KIR2DL5BQ8NHK3 375 aa14□□□□□ -0.17
EBF1-202ENST00000380654 IGHV3OR16-9A0A0B4J2B5 98 aa13.99□□□□□ -0.17
EBF1-202ENST00000380654 A0A096LPF7 62 aa13.99□□□□□ -0.17
EBF1-202ENST00000380654 C5orf38Q86SI9 138 aa13.99□□□□□ -0.17
EBF1-202ENST00000380654 UBE2WQ96B02 151 aa13.99□□□□□ -0.17
EBF1-202ENST00000380654 TRRAPQ9Y4A5 3859 aa13.99□□□□□ -0.17
EBF1-202ENST00000380654 NSD1Q96L73 2696 aaPredicted RBP13.99□□□□□ -0.17
EBF1-202ENST00000380654 LINC00612Q8N6U2 182 aa13.98□□□□□ -0.17
EBF1-202ENST00000380654 MIR7-3HGQ8N6C7 128 aa13.97□□□□□ -0.17
EBF1-202ENST00000380654 COPS9Q8WXC6 57 aa13.97□□□□□ -0.17
EBF1-202ENST00000380654 SHISA2Q6UWI4 295 aa13.97□□□□□ -0.17
EBF1-202ENST00000380654 TMEM262E9PQX1 116 aa13.96□□□□□ -0.17
EBF1-202ENST00000380654 H3BT86 120 aa13.96□□□□□ -0.17
EBF1-202ENST00000380654 DEFB4AO15263 64 aa13.96□□□□□ -0.17
EBF1-202ENST00000380654 INAFM1C9JVW0 142 aa13.95□□□□□ -0.18
EBF1-202ENST00000380654 LINC00959A0A1B0GUT2 108 aa13.95□□□□□ -0.18
EBF1-202ENST00000380654 COX7A2LO14548 114 aa13.95□□□□□ -0.18
EBF1-202ENST00000380654 FAM222AQ5U5X8 452 aa13.94□□□□□ -0.18
EBF1-202ENST00000380654 CLPSL2Q6UWE3 100 aa13.94□□□□□ -0.18
EBF1-202ENST00000380654 A0A087WZ39 114 aa13.93□□□□□ -0.18
EBF1-202ENST00000380654 C11orf68Q9H3H3 251 aaKnown RBP13.93□□□□□ -0.18
EBF1-202ENST00000380654 LINC00158P58513 81 aa13.92□□□□□ -0.18
EBF1-202ENST00000380654 DEFB135Q30KP9 77 aa13.92□□□□□ -0.18
EBF1-202ENST00000380654 XCL1P47992 114 aa13.92□□□□□ -0.18
EBF1-202ENST00000380654 IGKV2-28A0A075B6P5 120 aa13.91□□□□□ -0.18
EBF1-202ENST00000380654 TRAV8-4A0A0B4J246 113 aa13.91□□□□□ -0.18
EBF1-202ENST00000380654 IGKV2D-28P01615 120 aa13.91□□□□□ -0.18
EBF1-202ENST00000380654 LINC00337Q8N6G1 96 aa13.91□□□□□ -0.18
EBF1-202ENST00000380654 ATRQ13535 2644 aa13.91□□□□□ -0.18
EBF1-202ENST00000380654 PFN2P35080 140 aa13.91□□□□□ -0.18
EBF1-202ENST00000380654 PRO0255Q9UI72 69 aa13.91□□□□□ -0.18
EBF1-202ENST00000380654 FAM218AQ96MZ4 157 aa13.9□□□□□ -0.18
EBF1-202ENST00000380654 SND1-IT1Q9HBX3 110 aa13.9□□□□□ -0.18
EBF1-202ENST00000380654 C9orf66Q5T8R8 295 aa13.89□□□□□ -0.19
EBF1-202ENST00000380654 CKS1BP61024 79 aa13.89□□□□□ -0.19
EBF1-202ENST00000380654 SMIM9A6NGZ8 99 aa13.88□□□□□ -0.19
EBF1-202ENST00000380654 CCL18P55774 89 aa13.88□□□□□ -0.19
EBF1-202ENST00000380654 PAX4O43316 350 aa13.87□□□□□ -0.19
EBF1-202ENST00000380654 CRPP02741 224 aa13.87□□□□□ -0.19
EBF1-202ENST00000380654 Q8N3U1 123 aa13.87□□□□□ -0.19
EBF1-202ENST00000380654 PPDPFQ9H3Y8 114 aa13.87□□□□□ -0.19
EBF1-202ENST00000380654 HIVEP1P15822 2718 aa13.87□□□□□ -0.19
EBF1-202ENST00000380654 A0A1B0GUV1 79 aa13.86□□□□□ -0.19
EBF1-202ENST00000380654 TEP1Q99973 2627 aaKnown RBP13.86□□□□□ -0.19
EBF1-202ENST00000380654 TRAV13-2A0A0B4J235 113 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms