RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 RNF183Q96D59 192 aa8.39□□□□□ -1.07
USP3-202ENST00000380324 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
USP3-202ENST00000380324 H7C423 109 aa8.38□□□□□ -1.07
USP3-202ENST00000380324 PRIMA1Q86XR5 153 aa8.38□□□□□ -1.07
USP3-202ENST00000380324 ZFAND6Q6FIF0 208 aa8.38□□□□□ -1.07
USP3-202ENST00000380324 SFTA2Q6UW10 78 aa8.38□□□□□ -1.07
USP3-202ENST00000380324 SMIM1B2RUZ4 78 aa8.37□□□□□ -1.07
USP3-202ENST00000380324 RETNQ9HD89 108 aa8.37□□□□□ -1.07
USP3-202ENST00000380324 NOTCH1P46531 2555 aa8.37□□□□□ -1.07
USP3-202ENST00000380324 TRAV26-1A0A087WT03 109 aa8.37□□□□□ -1.07
USP3-202ENST00000380324 NPC2P61916 151 aa8.37□□□□□ -1.07
USP3-202ENST00000380324 FAM19A3Q7Z5A8 133 aa8.37□□□□□ -1.07
USP3-202ENST00000380324 A4D1N5 150 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 TMEM262E9PQX1 116 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 F5H768 121 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 ATP5G1P05496 136 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 SHISA2Q6UWI4 295 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 LITAFQ99732 161 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 PRSS2P07478 247 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 CFC1BP0CG36 223 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 CFC1P0CG37 223 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 SPART-AS1P0CW21 52 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 ZNF625Q96I27 306 aaPredicted RBP8.36□□□□□ -1.07
USP3-202ENST00000380324 Q9H8V8 135 aa8.36□□□□□ -1.07
USP3-202ENST00000380324 CLPSL2Q6UWE3 100 aa8.35□□□□□ -1.07
USP3-202ENST00000380324 DAND5Q8N907 189 aa8.35□□□□□ -1.07
USP3-202ENST00000380324 NDUFA1O15239 70 aa8.35□□□□□ -1.07
USP3-202ENST00000380324 TSPAN13O95857 204 aa8.35□□□□□ -1.07
USP3-202ENST00000380324 RPL24P83731 157 aaKnown RBP8.34□□□□□ -1.07
USP3-202ENST00000380324 A0A0U1RRA0 63 aa8.34□□□□□ -1.08
USP3-202ENST00000380324 TENM3Q9P273 2699 aa8.34□□□□□ -1.08
USP3-202ENST00000380324 G3V4G9 280 aa8.33□□□□□ -1.08
USP3-202ENST00000380324 EGFEM1PQ0D2K5 195 aa8.33□□□□□ -1.08
USP3-202ENST00000380324 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
USP3-202ENST00000380324 EIF4EBP3O60516 100 aaPredicted RBP8.32□□□□□ -1.08
USP3-202ENST00000380324 RBX1P62877 108 aa8.32□□□□□ -1.08
USP3-202ENST00000380324 MIAQ16674 131 aa8.32□□□□□ -1.08
USP3-202ENST00000380324 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
USP3-202ENST00000380324 Q8N3U1 123 aa8.32□□□□□ -1.08
USP3-202ENST00000380324 H7C2G1 150 aa8.32□□□□□ -1.08
USP3-202ENST00000380324 TOMM7Q9P0U1 55 aa8.32□□□□□ -1.08
USP3-202ENST00000380324 PRO1854Q9UHT4 67 aa8.32□□□□□ -1.08
USP3-202ENST00000380324 H3BMG7 143 aa8.31□□□□□ -1.08
USP3-202ENST00000380324 MTURNQ8N3F0 131 aa8.31□□□□□ -1.08
USP3-202ENST00000380324 SPANXDQ9BXN6 97 aa8.31□□□□□ -1.08
USP3-202ENST00000380324 SPANXCQ9NY87 97 aa8.31□□□□□ -1.08
USP3-202ENST00000380324 XCL1P47992 114 aa8.31□□□□□ -1.08
USP3-202ENST00000380324 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
USP3-202ENST00000380324 MEIG1Q5JSS6 88 aa8.3□□□□□ -1.08
USP3-202ENST00000380324 C5orf38Q86SI9 138 aa8.3□□□□□ -1.08
USP3-202ENST00000380324 IGHV3OR16-9A0A0B4J2B5 98 aa8.3□□□□□ -1.08
USP3-202ENST00000380324 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.29□□□□□ -1.08
USP3-202ENST00000380324 CIRBPQ14011 172 aaKnown RBP8.29□□□□□ -1.08
USP3-202ENST00000380324 NBEAL1Q6ZS30 2694 aa8.29□□□□□ -1.08
USP3-202ENST00000380324 A0A0B4J2C4 111 aa8.29□□□□□ -1.08
USP3-202ENST00000380324 A0A1B0GUV1 79 aa8.29□□□□□ -1.08
USP3-202ENST00000380324 Q1RN00 199 aa8.29□□□□□ -1.08
USP3-202ENST00000380324 COX7B2Q8TF08 81 aa8.29□□□□□ -1.08
USP3-202ENST00000380324 TIMM17BO60830 172 aa8.28□□□□□ -1.08
USP3-202ENST00000380324 MRPL23Q16540 153 aaKnown RBP8.28□□□□□ -1.08
USP3-202ENST00000380324 LINC00269Q8N2A0 174 aa8.28□□□□□ -1.08
USP3-202ENST00000380324 C11orf68Q9H3H3 251 aaKnown RBP8.28□□□□□ -1.08
USP3-202ENST00000380324 ICOSQ9Y6W8 199 aa8.28□□□□□ -1.08
USP3-202ENST00000380324 PRB2P02812 416 aaPredicted RBP8.28□□□□□ -1.08
USP3-202ENST00000380324 ANGP03950 147 aaKnown RBP8.28□□□□□ -1.08
USP3-202ENST00000380324 DNAH3Q8TD57 4116 aa8.27□□□□□ -1.09
USP3-202ENST00000380324 A0A087WZ39 114 aa8.27□□□□□ -1.09
USP3-202ENST00000380324 IGHV3-33P01772 117 aa8.27□□□□□ -1.09
USP3-202ENST00000380324 PSMB2P49721 201 aa8.27□□□□□ -1.09
USP3-202ENST00000380324 SS18Q15532 418 aa8.27□□□□□ -1.09
USP3-202ENST00000380324 IGLV10-54A0A075B6I4 117 aa8.26□□□□□ -1.09
USP3-202ENST00000380324 TEX48A0A1B0GUV7 120 aa8.26□□□□□ -1.09
USP3-202ENST00000380324 C21orf62-AS1Q17RA5 79 aa8.26□□□□□ -1.09
USP3-202ENST00000380324 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
USP3-202ENST00000380324 ERG28Q9UKR5 140 aa8.26□□□□□ -1.09
USP3-202ENST00000380324 Q6ZTC4 211 aa8.26□□□□□ -1.09
USP3-202ENST00000380324 SCGB1C2P0DMR2 95 aa8.25□□□□□ -1.09
USP3-202ENST00000380324 HERV-K104P63124 156 aa8.25□□□□□ -1.09
USP3-202ENST00000380324 LINC00308Q8TCZ7 52 aa8.25□□□□□ -1.09
USP3-202ENST00000380324 LYRM7Q5U5X0 104 aa8.25□□□□□ -1.09
USP3-202ENST00000380324 A0A0J9YWU9 116 aa8.24□□□□□ -1.09
USP3-202ENST00000380324 TCL1BO95988 128 aa8.24□□□□□ -1.09
USP3-202ENST00000380324 IFITM1P13164 125 aa8.24□□□□□ -1.09
USP3-202ENST00000380324 REG3AQ06141 175 aa8.24□□□□□ -1.09
USP3-202ENST00000380324 SOSTDC1Q6X4U4 206 aa8.24□□□□□ -1.09
USP3-202ENST00000380324 WFDC2Q14508 124 aa8.24□□□□□ -1.09
USP3-202ENST00000380324 RNF151Q2KHN1 245 aa8.24□□□□□ -1.09
USP3-202ENST00000380324 LELP1Q5T871 98 aa8.24□□□□□ -1.09
USP3-202ENST00000380324 MGAM2Q2M2H8 2515 aa8.24□□□□□ -1.09
USP3-202ENST00000380324 SH2D6Q7Z4S9 175 aa8.23□□□□□ -1.09
USP3-202ENST00000380324 F8W1H4 67 aa8.22□□□□□ -1.09
USP3-202ENST00000380324 RPL13AP40429 203 aaKnown RBP8.22□□□□□ -1.09
USP3-202ENST00000380324 KPRPQ5T749 579 aaPredicted RBP8.22□□□□□ -1.09
USP3-202ENST00000380324 CHCHD10Q8WYQ3 142 aaPredicted RBP8.22□□□□□ -1.09
USP3-202ENST00000380324 NANOS2P60321 138 aaKnown RBP8.21□□□□□ -1.09
USP3-202ENST00000380324 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.09
USP3-202ENST00000380324 PRO0461Q9UI25 63 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms