RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 CHAC1Q9BUX1 264 aa15.34■□□□□ 0.05
HLA-C-202ENST00000376237 TM2D2Q9BX73 214 aa15.34■□□□□ 0.05
HLA-C-202ENST00000376237 VPS13DQ5THJ4 4388 aa15.33■□□□□ 0.05
HLA-C-202ENST00000376237 PMCHL2Q9BQD1 86 aa15.33■□□□□ 0.04
HLA-C-202ENST00000376237 IGHV3OR16-9A0A0B4J2B5 98 aa15.32■□□□□ 0.04
HLA-C-202ENST00000376237 IGKCP01834 107 aa15.32■□□□□ 0.04
HLA-C-202ENST00000376237 COX6A2Q02221 97 aa15.32■□□□□ 0.04
HLA-C-202ENST00000376237 IGLV5-45A0A087WSX0 123 aa15.31■□□□□ 0.04
HLA-C-202ENST00000376237 GAGE12HA6NDE8 117 aa15.31■□□□□ 0.04
HLA-C-202ENST00000376237 C11orf86A6NJI1 115 aa15.31■□□□□ 0.04
HLA-C-202ENST00000376237 KRTAP26-1Q6PEX3 210 aa15.31■□□□□ 0.04
HLA-C-202ENST00000376237 FOXI1Q12951 378 aa15.3■□□□□ 0.04
HLA-C-202ENST00000376237 SCGB1D1O95968 90 aa15.29■□□□□ 0.04
HLA-C-202ENST00000376237 JOSD1Q15040 202 aaPredicted RBP15.29■□□□□ 0.04
HLA-C-202ENST00000376237 LINC00469Q8N7U9 141 aa15.29■□□□□ 0.04
HLA-C-202ENST00000376237 DNAH1Q9P2D7 4330 aa15.29■□□□□ 0.04
HLA-C-202ENST00000376237 C6orf223Q8N319 242 aa15.28■□□□□ 0.04
HLA-C-202ENST00000376237 CDKN2A-AS1Q9UH64 79 aa15.28■□□□□ 0.04
HLA-C-202ENST00000376237 A0A087WZ39 114 aa15.27■□□□□ 0.04
HLA-C-202ENST00000376237 H3BRM9 83 aa15.27■□□□□ 0.04
HLA-C-202ENST00000376237 COX7A2LO14548 114 aa15.27■□□□□ 0.04
HLA-C-202ENST00000376237 ZNF22P17026 224 aaPredicted RBP15.27■□□□□ 0.04
HLA-C-202ENST00000376237 TMEM170BQ5T4T1 132 aa15.27■□□□□ 0.04
HLA-C-202ENST00000376237 LINC01561Q8N1V8 128 aa15.27■□□□□ 0.04
HLA-C-202ENST00000376237 ALMS1Q8TCU4 4167 aa15.27■□□□□ 0.03
HLA-C-202ENST00000376237 LOC105371267A0A1B0GV96 52 aa15.27■□□□□ 0.03
HLA-C-202ENST00000376237 C1orf134Q5TEV5 83 aa15.26■□□□□ 0.03
HLA-C-202ENST00000376237 C5orf38Q86SI9 138 aa15.26■□□□□ 0.03
HLA-C-202ENST00000376237 PSCAO43653 123 aa15.24■□□□□ 0.03
HLA-C-202ENST00000376237 MALP21145 153 aa15.24■□□□□ 0.03
HLA-C-202ENST00000376237 APOMO95445 188 aa15.22■□□□□ 0.03
HLA-C-202ENST00000376237 Q6ZRN7 208 aaPredicted RBP15.22■□□□□ 0.03
HLA-C-202ENST00000376237 PYY3Q5JQD4 70 aa15.22■□□□□ 0.03
HLA-C-202ENST00000376237 HERVK_113P61574 105 aa15.21■□□□□ 0.03
HLA-C-202ENST00000376237 CFAP161Q6P656 301 aa15.21■□□□□ 0.03
HLA-C-202ENST00000376237 TMEM223A0PJW6 202 aa15.2■□□□□ 0.02
HLA-C-202ENST00000376237 ATOH7Q8N100 152 aa15.2■□□□□ 0.02
HLA-C-202ENST00000376237 MAPKAPK5-AS1Q8N8E1 139 aa15.2■□□□□ 0.02
HLA-C-202ENST00000376237 IGHV1-58A0A0C4DH39 117 aa15.18■□□□□ 0.02
HLA-C-202ENST00000376237 SMIM1B2RUZ4 78 aa15.18■□□□□ 0.02
HLA-C-202ENST00000376237 SPINK8P0C7L1 97 aa15.17■□□□□ 0.02
HLA-C-202ENST00000376237 KMT2CQ8NEZ4 4911 aaKnown RBP15.17■□□□□ 0.02
HLA-C-202ENST00000376237 IGHV3-64A0A075B6Q5 118 aa15.17■□□□□ 0.02
HLA-C-202ENST00000376237 HSBP1L1C9JCN9 74 aa15.17■□□□□ 0.02
HLA-C-202ENST00000376237 IGLV5-39A0A0G2JS06 123 aa15.16■□□□□ 0.02
HLA-C-202ENST00000376237 STPG4Q8N801 248 aa15.16■□□□□ 0.02
HLA-C-202ENST00000376237 ORAOV1Q8WV07 137 aa15.14■□□□□ 0.01
HLA-C-202ENST00000376237 KMT2AQ03164 3969 aa15.14■□□□□ 0.01
HLA-C-202ENST00000376237 E9PLD3 99 aa15.13■□□□□ 0.01
HLA-C-202ENST00000376237 hDV102S1A0JD36 115 aa15.12■□□□□ 0.01
HLA-C-202ENST00000376237 USP17L23D6RBM5 183 aa15.12■□□□□ 0.01
HLA-C-202ENST00000376237 C15orf56Q8N910 161 aa15.12■□□□□ 0.01
HLA-C-202ENST00000376237 SMIM6P0DI80 62 aa15.12■□□□□ 0.01
HLA-C-202ENST00000376237 C14orf177Q52M58 125 aa15.12■□□□□ 0.01
HLA-C-202ENST00000376237 Q8IZM0 81 aa15.12■□□□□ 0.01
HLA-C-202ENST00000376237 GVQW2A0A096LPI5 108 aaPredicted RBP15.11■□□□□ 0.01
HLA-C-202ENST00000376237 LEPROTO15243 131 aa15.11■□□□□ 0.01
HLA-C-202ENST00000376237 PRSS2P07478 247 aa15.11■□□□□ 0.01
HLA-C-202ENST00000376237 PLEKHB2Q96CS7 222 aa15.11■□□□□ 0.01
HLA-C-202ENST00000376237 DNAH6Q9C0G6 4158 aa15.1■□□□□ 0.01
HLA-C-202ENST00000376237 LRCOL1A6NCL2 159 aa15.1■□□□□ 0.01
HLA-C-202ENST00000376237 ZNF561-AS1K7EIQ3 104 aa15.1■□□□□ 0.01
HLA-C-202ENST00000376237 COX7B2Q8TF08 81 aa15.1■□□□□ 0.01
HLA-C-202ENST00000376237 VAMP8Q9BV40 100 aa15.1■□□□□ 0.01
HLA-C-202ENST00000376237 TOMM7Q9P0U1 55 aa15.1■□□□□ 0.01
HLA-C-202ENST00000376237 SPAG11BQ08648 103 aa15.09■□□□□ 0.01
HLA-C-202ENST00000376237 MAJINQ3KP22 176 aa15.09■□□□□ 0.01
HLA-C-202ENST00000376237 C6orf226Q5I0X4 101 aa15.09■□□□□ 0.01
HLA-C-202ENST00000376237 LECT2O14960 151 aa15.08■□□□□ 0.01
HLA-C-202ENST00000376237 RTL8CO15255 209 aa15.08■□□□□ 0.01
HLA-C-202ENST00000376237 KIAA0087Q14695 138 aa15.07■□□□□ 0
HLA-C-202ENST00000376237 ANKRD39Q53RE8 183 aa15.07■□□□□ 0
HLA-C-202ENST00000376237 F8WDY8 70 aa15.07■□□□□ 0
HLA-C-202ENST00000376237 J3QQQ9 107 aa15.07■□□□□ 0
HLA-C-202ENST00000376237 S100A12P80511 92 aa15.07■□□□□ 0
HLA-C-202ENST00000376237 HIGD2BQ4VC39 106 aa15.07■□□□□ 0
HLA-C-202ENST00000376237 A0A087WTM6 91 aa15.06■□□□□ 0
HLA-C-202ENST00000376237 CXCL5P42830 114 aa15.06■□□□□ 0
HLA-C-202ENST00000376237 WFDC2Q14508 124 aa15.06■□□□□ 0
HLA-C-202ENST00000376237 C2orf48Q96LS8 159 aa15.06■□□□□ 0
HLA-C-202ENST00000376237 LGALS3P17931 250 aaKnown RBP15.05■□□□□ -0
HLA-C-202ENST00000376237 SFTA2Q6UW10 78 aa15.05■□□□□ -0
HLA-C-202ENST00000376237 NTN5Q8WTR8 489 aaPredicted RBP15.05■□□□□ -0
HLA-C-202ENST00000376237 SACSQ9NZJ4 4579 aa15.04■□□□□ -0
HLA-C-202ENST00000376237 CKS1BP61024 79 aa15.04■□□□□ -0
HLA-C-202ENST00000376237 CDPF1Q6NVV7 123 aa15.04■□□□□ -0
HLA-C-202ENST00000376237 PAM16Q9Y3D7 125 aa15.04■□□□□ -0
HLA-C-202ENST00000376237 IGKV2D-26A0A0A0MRZ7 120 aa15.03■□□□□ -0
HLA-C-202ENST00000376237 EREGO14944 169 aa15.03■□□□□ -0
HLA-C-202ENST00000376237 NMUP48645 174 aa15.02■□□□□ -0
HLA-C-202ENST00000376237 SPATA45Q537H7 98 aa15.02■□□□□ -0
HLA-C-202ENST00000376237 LINC00336Q6ZUF6 198 aa15.02□□□□□ -0.01
HLA-C-202ENST00000376237 Q8N814 137 aa15.02□□□□□ -0.01
HLA-C-202ENST00000376237 TSPEAR-AS2P59090 65 aa15.01□□□□□ -0.01
HLA-C-202ENST00000376237 TNP2Q05952 138 aa15.01□□□□□ -0.01
HLA-C-202ENST00000376237 LINC00526Q96FQ7 95 aa15.01□□□□□ -0.01
HLA-C-202ENST00000376237 CAMK2N2Q96S95 79 aa15.01□□□□□ -0.01
HLA-C-202ENST00000376237 NDUFA12Q9UI09 145 aa15.01□□□□□ -0.01
HLA-C-202ENST00000376237 NDUFA1O15239 70 aa15□□□□□ -0.01
HLA-C-202ENST00000376237 RYR3Q15413 4870 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 290.7 ms