RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 C19orf73Q9NVV2 129 aa8.72□□□□□ -1.01
UBR4-203ENST00000375225 IGLV5-39A0A0G2JS06 123 aa8.71□□□□□ -1.01
UBR4-203ENST00000375225 GAGE12HA6NDE8 117 aa8.71□□□□□ -1.01
UBR4-203ENST00000375225 LINC00242Q5T6M2 205 aa8.71□□□□□ -1.01
UBR4-203ENST00000375225 SPATA25Q9BR10 227 aa8.71□□□□□ -1.01
UBR4-203ENST00000375225 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 H7C2G1 150 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 GIG44P09565 113 aaPredicted RBP8.7□□□□□ -1.02
UBR4-203ENST00000375225 CFAP161Q6P656 301 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 CSNK1G2-AS1Q8NCQ2 148 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 TRAV13-1A0A0B4J241 112 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 TMEM262E9PQX1 116 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 SLC25A20O43772 301 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 C9orf66Q5T8R8 295 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 MTURNQ8N3F0 131 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 KIR2DL5BQ8NHK3 375 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 ICOSQ9Y6W8 199 aa8.7□□□□□ -1.02
UBR4-203ENST00000375225 PLAC8L1A1L4L8 177 aa8.69□□□□□ -1.02
UBR4-203ENST00000375225 MEIG1Q5JSS6 88 aa8.69□□□□□ -1.02
UBR4-203ENST00000375225 NTM-AS1Q6ZSK4 140 aa8.69□□□□□ -1.02
UBR4-203ENST00000375225 Q9H8V8 135 aa8.69□□□□□ -1.02
UBR4-203ENST00000375225 JMJD1CQ15652 2540 aa8.68□□□□□ -1.02
UBR4-203ENST00000375225 SMIM1B2RUZ4 78 aa8.68□□□□□ -1.02
UBR4-203ENST00000375225 C9JAW5 83 aa8.68□□□□□ -1.02
UBR4-203ENST00000375225 LINC00694P0DN24 101 aa8.68□□□□□ -1.02
UBR4-203ENST00000375225 SMCPP49901 116 aaPredicted RBP8.68□□□□□ -1.02
UBR4-203ENST00000375225 PRIMA1Q86XR5 153 aa8.68□□□□□ -1.02
UBR4-203ENST00000375225 C3orf56Q8N813 242 aa8.68□□□□□ -1.02
UBR4-203ENST00000375225 COX6A2Q02221 97 aa8.67□□□□□ -1.02
UBR4-203ENST00000375225 ADAMTSL4-AS1Q5T5F5 129 aa8.67□□□□□ -1.02
UBR4-203ENST00000375225 SHISA2Q6UWI4 295 aa8.67□□□□□ -1.02
UBR4-203ENST00000375225 NIPBLQ6KC79 2804 aaeCLIP8.66□□□□□ -1.022e-11■■□□□ 13
UBR4-203ENST00000375225 TRBV6-8A0A0A6YYG3 113 aa8.66□□□□□ -1.02
UBR4-203ENST00000375225 TRBV10-2A0A0K0K1G8 114 aa8.66□□□□□ -1.02
UBR4-203ENST00000375225 LINC01620Q4KN68 170 aa8.66□□□□□ -1.02
UBR4-203ENST00000375225 ANKRD29Q8N6D5 301 aa8.66□□□□□ -1.02
UBR4-203ENST00000375225 LINC01600Q96MT4 127 aa8.66□□□□□ -1.02
UBR4-203ENST00000375225 WFDC10AQ9H1F0 79 aa8.66□□□□□ -1.02
UBR4-203ENST00000375225 TEP1Q99973 2627 aaKnown RBP8.65□□□□□ -1.02
UBR4-203ENST00000375225 TRIAP1O43715 76 aa8.65□□□□□ -1.02
UBR4-203ENST00000375225 RPL13AP40429 203 aaKnown RBP8.65□□□□□ -1.02
UBR4-203ENST00000375225 FHL2Q14192 279 aa8.65□□□□□ -1.02
UBR4-203ENST00000375225 LINC00308Q8TCZ7 52 aa8.65□□□□□ -1.02
UBR4-203ENST00000375225 CHCHD5Q9BSY4 110 aa8.65□□□□□ -1.02
UBR4-203ENST00000375225 H3BT86 120 aa8.64□□□□□ -1.03
UBR4-203ENST00000375225 EIF4EBP3O60516 100 aaPredicted RBP8.64□□□□□ -1.03
UBR4-203ENST00000375225 LYRM9A8MSI8 78 aa8.64□□□□□ -1.03
UBR4-203ENST00000375225 A8MZ25 164 aa8.64□□□□□ -1.03
UBR4-203ENST00000375225 COX7B2Q8TF08 81 aa8.64□□□□□ -1.03
UBR4-203ENST00000375225 ZNF625Q96I27 306 aaPredicted RBP8.64□□□□□ -1.03
UBR4-203ENST00000375225 ATRQ13535 2644 aa8.63□□□□□ -1.03
UBR4-203ENST00000375225 F5H768 121 aa8.63□□□□□ -1.03
UBR4-203ENST00000375225 APOC4P55056 127 aa8.63□□□□□ -1.03
UBR4-203ENST00000375225 NPC2P61916 151 aa8.63□□□□□ -1.03
UBR4-203ENST00000375225 GAGE6Q13070 117 aa8.63□□□□□ -1.03
UBR4-203ENST00000375225 LINC00612Q8N6U2 182 aa8.63□□□□□ -1.03
UBR4-203ENST00000375225 WFDC9Q8NEX5 89 aa8.63□□□□□ -1.03
UBR4-203ENST00000375225 MAST4O15021 2626 aa8.63□□□□□ -1.03
UBR4-203ENST00000375225 TRAV13-2A0A0B4J235 113 aa8.61□□□□□ -1.03
UBR4-203ENST00000375225 LOC100131303A0A0U1RQF7 123 aa8.61□□□□□ -1.03
UBR4-203ENST00000375225 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
UBR4-203ENST00000375225 PRO0255Q9UI72 69 aa8.61□□□□□ -1.03
UBR4-203ENST00000375225 LST1O00453 97 aa8.6□□□□□ -1.03
UBR4-203ENST00000375225 DEFB130BP0DP73 79 aa8.6□□□□□ -1.03
UBR4-203ENST00000375225 DEFB130AP0DP74 79 aa8.6□□□□□ -1.03
UBR4-203ENST00000375225 SS18Q15532 418 aa8.6□□□□□ -1.03
UBR4-203ENST00000375225 FAM222AQ5U5X8 452 aa8.6□□□□□ -1.03
UBR4-203ENST00000375225 LINC01561Q8N1V8 128 aa8.6□□□□□ -1.03
UBR4-203ENST00000375225 UBE2WQ96B02 151 aa8.6□□□□□ -1.03
UBR4-203ENST00000375225 GYPEP15421 78 aa8.59□□□□□ -1.03
UBR4-203ENST00000375225 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
UBR4-203ENST00000375225 TENM1Q9UKZ4 2725 aa8.59□□□□□ -1.03
UBR4-203ENST00000375225 A0A087WZ39 114 aa8.59□□□□□ -1.03
UBR4-203ENST00000375225 A0A1B0GUV1 79 aa8.59□□□□□ -1.03
UBR4-203ENST00000375225 WIPF1O43516 503 aa8.59□□□□□ -1.03
UBR4-203ENST00000375225 DAND5Q8N907 189 aa8.59□□□□□ -1.03
UBR4-203ENST00000375225 SPATA3Q8NHX4 192 aa8.59□□□□□ -1.03
UBR4-203ENST00000375225 IBA57-AS1B1ANH7 110 aa8.58□□□□□ -1.04
UBR4-203ENST00000375225 COX7A2LO14548 114 aa8.58□□□□□ -1.04
UBR4-203ENST00000375225 TRAV26-1A0A087WT03 109 aa8.57□□□□□ -1.04
UBR4-203ENST00000375225 CRPP02741 224 aa8.57□□□□□ -1.04
UBR4-203ENST00000375225 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
UBR4-203ENST00000375225 NTN5Q8WTR8 489 aaPredicted RBP8.57□□□□□ -1.04
UBR4-203ENST00000375225 TOMM7Q9P0U1 55 aa8.57□□□□□ -1.04
UBR4-203ENST00000375225 TRAV8-4A0A0B4J246 113 aa8.56□□□□□ -1.04
UBR4-203ENST00000375225 IGKV3OR2-268A0A0C4DH90 116 aa8.56□□□□□ -1.04
UBR4-203ENST00000375225 PAX4O43316 350 aa8.56□□□□□ -1.04
UBR4-203ENST00000375225 X6R8D5 127 aa8.56□□□□□ -1.04
UBR4-203ENST00000375225 IGLV4-60A0A075B6I1 120 aa8.55□□□□□ -1.04
UBR4-203ENST00000375225 IGHV3OR16-9A0A0B4J2B5 98 aa8.55□□□□□ -1.04
UBR4-203ENST00000375225 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
UBR4-203ENST00000375225 LINC00959A0A1B0GUT2 108 aa8.55□□□□□ -1.04
UBR4-203ENST00000375225 A0A1B0GV72 72 aa8.55□□□□□ -1.04
UBR4-203ENST00000375225 LINC00158P58513 81 aa8.55□□□□□ -1.04
UBR4-203ENST00000375225 CDIP1Q9H305 208 aa8.55□□□□□ -1.04
UBR4-203ENST00000375225 TRACP01848 142 aa8.54□□□□□ -1.04
UBR4-203ENST00000375225 MIFP14174 115 aa8.54□□□□□ -1.04
UBR4-203ENST00000375225 CXCL5P42830 114 aa8.54□□□□□ -1.04
UBR4-203ENST00000375225 DAD1P61803 113 aa8.54□□□□□ -1.04
UBR4-203ENST00000375225 C6orf226Q5I0X4 101 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms