RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 IGHV3-16A0A0C4DH30 117 aa12.55□□□□□ -0.4
LDLRAP1-201ENST00000374338 IGLV4-3A0A075B6K6 122 aa12.55□□□□□ -0.4
LDLRAP1-201ENST00000374338 IGHV3OR16-12A0A075B7B8 117 aa12.55□□□□□ -0.4
LDLRAP1-201ENST00000374338 C22orf24Q9Y442 160 aa12.54□□□□□ -0.4
LDLRAP1-201ENST00000374338 K7EMT4 169 aa12.54□□□□□ -0.4
LDLRAP1-201ENST00000374338 HIVEP2P31629 2446 aa12.54□□□□□ -0.4
LDLRAP1-201ENST00000374338 GCN1Q92616 2671 aaKnown RBP12.53□□□□□ -0.4
LDLRAP1-201ENST00000374338 RS1O15537 224 aa12.53□□□□□ -0.4
LDLRAP1-201ENST00000374338 Q6YL49 198 aa12.53□□□□□ -0.4
LDLRAP1-201ENST00000374338 SERP2Q8N6R1 65 aa12.53□□□□□ -0.4
LDLRAP1-201ENST00000374338 ZNF625Q96I27 306 aaPredicted RBP12.53□□□□□ -0.4
LDLRAP1-201ENST00000374338 TRBV6-5A0A0K0K1A5 114 aa12.53□□□□□ -0.4
LDLRAP1-201ENST00000374338 M0QY20 66 aa12.53□□□□□ -0.4
LDLRAP1-201ENST00000374338 BAALC-AS2P0C853 105 aa12.53□□□□□ -0.4
LDLRAP1-201ENST00000374338 WFDC11Q8NEX6 87 aa12.53□□□□□ -0.4
LDLRAP1-201ENST00000374338 PYGO1Q9Y3Y4 419 aa12.53□□□□□ -0.4
LDLRAP1-201ENST00000374338 COX7A2LO14548 114 aa12.52□□□□□ -0.4
LDLRAP1-201ENST00000374338 IGHV1-58A0A0C4DH39 117 aa12.52□□□□□ -0.41
LDLRAP1-201ENST00000374338 C20orf203Q8NBC4 194 aa12.52□□□□□ -0.41
LDLRAP1-201ENST00000374338 IGHV1OR15-1A0A075B7D0 117 aa12.51□□□□□ -0.41
LDLRAP1-201ENST00000374338 CD28P10747 220 aa12.51□□□□□ -0.41
LDLRAP1-201ENST00000374338 VWFP04275 2813 aa12.51□□□□□ -0.41
LDLRAP1-201ENST00000374338 RBMY1BA6NDE4 496 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-201ENST00000374338 RBMY1EA6NEQ0 496 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-201ENST00000374338 RBMY1DP0C7P1 496 aaKnown RBP12.51□□□□□ -0.41
LDLRAP1-201ENST00000374338 BEAN1Q3B7T3 259 aa12.51□□□□□ -0.41
LDLRAP1-201ENST00000374338 IGHV3-38A0A0C4DH36 116 aa12.5□□□□□ -0.41
LDLRAP1-201ENST00000374338 DSCR9P59020 149 aa12.5□□□□□ -0.41
LDLRAP1-201ENST00000374338 FAM104AQ969W3 186 aa12.49□□□□□ -0.41
LDLRAP1-201ENST00000374338 MRPS36P82909 103 aaKnown RBP12.48□□□□□ -0.41
LDLRAP1-201ENST00000374338 DEFB113Q30KQ7 82 aa12.48□□□□□ -0.41
LDLRAP1-201ENST00000374338 VSIG2Q96IQ7 327 aa12.48□□□□□ -0.41
LDLRAP1-201ENST00000374338 UBE2E2Q96LR5 201 aa12.48□□□□□ -0.41
LDLRAP1-201ENST00000374338 PDZD2O15018 2839 aa12.48□□□□□ -0.41
LDLRAP1-201ENST00000374338 Q6ZSN1 163 aa12.48□□□□□ -0.41
LDLRAP1-201ENST00000374338 UNC79Q9P2D8 2635 aa12.47□□□□□ -0.41
LDLRAP1-201ENST00000374338 IGKV3D-7A0A0C4DH55 119 aa12.47□□□□□ -0.41
LDLRAP1-201ENST00000374338 INAFM2P0DMQ5 153 aa12.47□□□□□ -0.41
LDLRAP1-201ENST00000374338 A0A087WVE0 104 aa12.46□□□□□ -0.41
LDLRAP1-201ENST00000374338 Q8N2B8 174 aa12.46□□□□□ -0.41
LDLRAP1-201ENST00000374338 C9orf85Q96MD7 179 aa12.46□□□□□ -0.41
LDLRAP1-201ENST00000374338 XCL2Q9UBD3 114 aa12.46□□□□□ -0.41
LDLRAP1-201ENST00000374338 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.44□□□□□ -0.42
LDLRAP1-201ENST00000374338 IGKV2-29A2NJV5 120 aaPredicted RBP12.44□□□□□ -0.42
LDLRAP1-201ENST00000374338 TIMM17BO60830 172 aa12.44□□□□□ -0.42
LDLRAP1-201ENST00000374338 FAM222AQ5U5X8 452 aa12.44□□□□□ -0.42
LDLRAP1-201ENST00000374338 DYNLRB2Q8TF09 96 aa12.44□□□□□ -0.42
LDLRAP1-201ENST00000374338 LINC01561Q8N1V8 128 aa12.44□□□□□ -0.42
LDLRAP1-201ENST00000374338 FAM218AQ96MZ4 157 aa12.44□□□□□ -0.42
LDLRAP1-201ENST00000374338 USP17L23D6RBM5 183 aa12.43□□□□□ -0.42
LDLRAP1-201ENST00000374338 J3QLI3 93 aa12.42□□□□□ -0.42
LDLRAP1-201ENST00000374338 FHL2Q14192 279 aa12.42□□□□□ -0.42
LDLRAP1-201ENST00000374338 WFDC10AQ9H1F0 79 aa12.42□□□□□ -0.42
LDLRAP1-201ENST00000374338 IGHV3-53P01767 116 aa12.41□□□□□ -0.42
LDLRAP1-201ENST00000374338 MALP21145 153 aa12.41□□□□□ -0.42
LDLRAP1-201ENST00000374338 LINC00308Q8TCZ7 52 aa12.41□□□□□ -0.42
LDLRAP1-201ENST00000374338 FSHBP01225 129 aa12.41□□□□□ -0.42
LDLRAP1-201ENST00000374338 Q6JHZ5 121 aa12.41□□□□□ -0.42
LDLRAP1-201ENST00000374338 KRTAP1-3Q8IUG1 177 aa12.41□□□□□ -0.42
LDLRAP1-201ENST00000374338 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.41□□□□□ -0.42
LDLRAP1-201ENST00000374338 ESM1Q9NQ30 184 aa12.41□□□□□ -0.42
LDLRAP1-201ENST00000374338 PRO0628Q9UI54 55 aa12.41□□□□□ -0.42
LDLRAP1-201ENST00000374338 OTOGQ6ZRI0 2925 aa12.4□□□□□ -0.42
LDLRAP1-201ENST00000374338 PFN2P35080 140 aa12.4□□□□□ -0.42
LDLRAP1-201ENST00000374338 CDKN2A-AS1Q9UH64 79 aa12.4□□□□□ -0.42
LDLRAP1-201ENST00000374338 LINC00336Q6ZUF6 198 aa12.4□□□□□ -0.42
LDLRAP1-201ENST00000374338 MAP6D1Q9H9H5 199 aa12.4□□□□□ -0.42
LDLRAP1-201ENST00000374338 Q9HAA7 133 aa12.4□□□□□ -0.42
LDLRAP1-201ENST00000374338 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
LDLRAP1-201ENST00000374338 PRIMA1Q86XR5 153 aa12.39□□□□□ -0.43
LDLRAP1-201ENST00000374338 ANK3Q12955 4377 aaKnown RBP12.39□□□□□ -0.43
LDLRAP1-201ENST00000374338 DNAL4O96015 105 aa12.38□□□□□ -0.43
LDLRAP1-201ENST00000374338 LINC00846Q9NV44 126 aa12.38□□□□□ -0.43
LDLRAP1-201ENST00000374338 TINCRA0A1B0GVN0 87 aa12.38□□□□□ -0.43
LDLRAP1-201ENST00000374338 TENM1Q9UKZ4 2725 aa12.38□□□□□ -0.43
LDLRAP1-201ENST00000374338 C9orf129Q5T035 196 aaKnown RBP12.37□□□□□ -0.43
LDLRAP1-201ENST00000374338 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
LDLRAP1-201ENST00000374338 SOSTDC1Q6X4U4 206 aa12.37□□□□□ -0.43
LDLRAP1-201ENST00000374338 DNAJC9-AS1A6NH13 148 aa12.36□□□□□ -0.43
LDLRAP1-201ENST00000374338 NDUFA1O15239 70 aa12.36□□□□□ -0.43
LDLRAP1-201ENST00000374338 SMR3AQ99954 134 aa12.36□□□□□ -0.43
LDLRAP1-201ENST00000374338 F8WDY8 70 aa12.36□□□□□ -0.43
LDLRAP1-201ENST00000374338 C14orf132Q9NPU4 83 aa12.36□□□□□ -0.43
LDLRAP1-201ENST00000374338 DEFB114Q30KQ6 69 aa12.35□□□□□ -0.43
LDLRAP1-201ENST00000374338 C1orf43Q9BWL3 253 aa12.35□□□□□ -0.43
LDLRAP1-201ENST00000374338 COX6A2Q02221 97 aa12.35□□□□□ -0.43
LDLRAP1-201ENST00000374338 Q9H8V8 135 aa12.35□□□□□ -0.43
LDLRAP1-201ENST00000374338 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
LDLRAP1-201ENST00000374338 TRRAPQ9Y4A5 3859 aa12.34□□□□□ -0.43
LDLRAP1-201ENST00000374338 NDUFC2-KCTD14E9PQ53 114 aa12.33□□□□□ -0.44
LDLRAP1-201ENST00000374338 UBE2D4Q9Y2X8 147 aa12.33□□□□□ -0.44
LDLRAP1-201ENST00000374338 TMEM89A2RUT3 159 aa12.33□□□□□ -0.44
LDLRAP1-201ENST00000374338 NDUFC2O95298 119 aa12.33□□□□□ -0.44
LDLRAP1-201ENST00000374338 ODF3L2Q3SX64 289 aa12.33□□□□□ -0.44
LDLRAP1-201ENST00000374338 PIK3CD-AS1Q5SR53 167 aa12.32□□□□□ -0.44
LDLRAP1-201ENST00000374338 RPL35AP18077 110 aaKnown RBP12.31□□□□□ -0.44
LDLRAP1-201ENST00000374338 C4orf3Q8WVX3 66 aa12.31□□□□□ -0.44
LDLRAP1-201ENST00000374338 ATRQ13535 2644 aa12.31□□□□□ -0.44
LDLRAP1-201ENST00000374338 TRGV1A0A0A0MS02 117 aa12.31□□□□□ -0.44
LDLRAP1-201ENST00000374338 ZNF415Q09FC8 603 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms