RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 TMEM18Q96B42 140 aa11.26□□□□□ -0.61
TRAPPC3-202ENST00000373162 SPANXA1Q9NS26 97 aa11.26□□□□□ -0.61
TRAPPC3-202ENST00000373162 IGLV4-69A0A075B6H9 119 aa11.25□□□□□ -0.61
TRAPPC3-202ENST00000373162 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
TRAPPC3-202ENST00000373162 ORMDL3Q8N138 153 aa11.25□□□□□ -0.61
TRAPPC3-202ENST00000373162 STPG4Q8N801 248 aa11.25□□□□□ -0.61
TRAPPC3-202ENST00000373162 IGHV3OR16-9A0A0B4J2B5 98 aa11.24□□□□□ -0.61
TRAPPC3-202ENST00000373162 OPRPNQ99935 248 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC3-202ENST00000373162 ZNF561-AS1K7EIQ3 104 aa11.23□□□□□ -0.61
TRAPPC3-202ENST00000373162 TMEM136Q6ZRR5 245 aa11.23□□□□□ -0.61
TRAPPC3-202ENST00000373162 C2orf48Q96LS8 159 aa11.23□□□□□ -0.61
TRAPPC3-202ENST00000373162 TGIF2-C20orf24A0A0A6YYL0 155 aa11.22□□□□□ -0.61
TRAPPC3-202ENST00000373162 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
TRAPPC3-202ENST00000373162 PRR3P79522 188 aaKnown RBP11.22□□□□□ -0.61
TRAPPC3-202ENST00000373162 C5orf38Q86SI9 138 aa11.22□□□□□ -0.61
TRAPPC3-202ENST00000373162 CBLN2Q8IUK8 224 aa11.22□□□□□ -0.61
TRAPPC3-202ENST00000373162 DPH3Q96FX2 82 aa11.22□□□□□ -0.61
TRAPPC3-202ENST00000373162 PRELID3AQ96N28 172 aa11.22□□□□□ -0.61
TRAPPC3-202ENST00000373162 SMCO4Q9NRQ5 59 aa11.22□□□□□ -0.61
TRAPPC3-202ENST00000373162 LINC00474Q9P2X8 69 aa11.22□□□□□ -0.61
TRAPPC3-202ENST00000373162 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
TRAPPC3-202ENST00000373162 COX19Q49B96 90 aa11.21□□□□□ -0.61
TRAPPC3-202ENST00000373162 LAMTOR2Q9Y2Q5 125 aa11.21□□□□□ -0.61
TRAPPC3-202ENST00000373162 PYGO1Q9Y3Y4 419 aa11.21□□□□□ -0.61
TRAPPC3-202ENST00000373162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC3-202ENST00000373162 MALP21145 153 aa11.2□□□□□ -0.62
TRAPPC3-202ENST00000373162 C7orf33Q8WU49 177 aa11.2□□□□□ -0.62
TRAPPC3-202ENST00000373162 YPEL4Q96NS1 127 aa11.2□□□□□ -0.62
TRAPPC3-202ENST00000373162 GNB1LQ9BYB4 327 aa11.2□□□□□ -0.62
TRAPPC3-202ENST00000373162 IGLV4-3A0A075B6K6 122 aa11.19□□□□□ -0.62
TRAPPC3-202ENST00000373162 ATP6V1G1O75348 118 aa11.19□□□□□ -0.62
TRAPPC3-202ENST00000373162 OR10D4PQ8NGN7 298 aa11.19□□□□□ -0.62
TRAPPC3-202ENST00000373162 LOC107984640A0A0U1RRK4 108 aa11.18□□□□□ -0.62
TRAPPC3-202ENST00000373162 SPAG11BQ08648 103 aa11.18□□□□□ -0.62
TRAPPC3-202ENST00000373162 RNF151Q2KHN1 245 aa11.18□□□□□ -0.62
TRAPPC3-202ENST00000373162 SERTAD4-AS1Q5TG53 156 aa11.18□□□□□ -0.62
TRAPPC3-202ENST00000373162 APOMO95445 188 aa11.17□□□□□ -0.62
TRAPPC3-202ENST00000373162 MT-ND6P03923 174 aa11.17□□□□□ -0.62
TRAPPC3-202ENST00000373162 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
TRAPPC3-202ENST00000373162 A0A1W2PNN7 141 aa11.16□□□□□ -0.62
TRAPPC3-202ENST00000373162 IFITM10A6NMD0 228 aa11.16□□□□□ -0.62
TRAPPC3-202ENST00000373162 S100A1P23297 94 aa11.16□□□□□ -0.62
TRAPPC3-202ENST00000373162 KIAA0087Q14695 138 aa11.16□□□□□ -0.62
TRAPPC3-202ENST00000373162 LINC00242Q5T6M2 205 aa11.16□□□□□ -0.62
TRAPPC3-202ENST00000373162 LINC00173Q6ZV60 143 aa11.16□□□□□ -0.62
TRAPPC3-202ENST00000373162 MRPL35Q9NZE8 188 aaKnown RBP11.16□□□□□ -0.62
TRAPPC3-202ENST00000373162 TNXBP22105 4242 aa11.16□□□□□ -0.62
TRAPPC3-202ENST00000373162 F8WDY8 70 aa11.15□□□□□ -0.62
TRAPPC3-202ENST00000373162 Q8N8P6 123 aa11.15□□□□□ -0.62
TRAPPC3-202ENST00000373162 MRPL18Q9H0U6 180 aaKnown RBP11.15□□□□□ -0.62
TRAPPC3-202ENST00000373162 A0A087WZ39 114 aa11.14□□□□□ -0.63
TRAPPC3-202ENST00000373162 SCO1O75880 301 aa11.14□□□□□ -0.63
TRAPPC3-202ENST00000373162 RAB5AP20339 215 aa11.14□□□□□ -0.63
TRAPPC3-202ENST00000373162 IFI27P40305 119 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC3-202ENST00000373162 SRSF9Q13242 221 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRAPPC3-202ENST00000373162 KIAA1644Q3SXP7 199 aa11.14□□□□□ -0.63
TRAPPC3-202ENST00000373162 C10orf25Q5T742 122 aa11.14□□□□□ -0.63
TRAPPC3-202ENST00000373162 ORAOV1Q8WV07 137 aa11.14□□□□□ -0.63
TRAPPC3-202ENST00000373162 MAP1LC3AQ9H492 121 aa11.14□□□□□ -0.63
TRAPPC3-202ENST00000373162 TRAPPC1Q9Y5R8 145 aa11.14□□□□□ -0.63
TRAPPC3-202ENST00000373162 UBE2D1P51668 147 aa11.13□□□□□ -0.63
TRAPPC3-202ENST00000373162 FABP9Q0Z7S8 132 aa11.13□□□□□ -0.63
TRAPPC3-202ENST00000373162 AMELXQ99217 191 aa11.13□□□□□ -0.63
TRAPPC3-202ENST00000373162 A0A0J9YXV3 536 aa11.12□□□□□ -0.63
TRAPPC3-202ENST00000373162 LOC389332A0A1B0GUA5 103 aa11.12□□□□□ -0.63
TRAPPC3-202ENST00000373162 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
TRAPPC3-202ENST00000373162 GAGE2BQ13066 116 aa11.12□□□□□ -0.63
TRAPPC3-202ENST00000373162 C2orf66Q6UXQ4 117 aa11.12□□□□□ -0.63
TRAPPC3-202ENST00000373162 TMEM141Q96I45 108 aa11.12□□□□□ -0.63
TRAPPC3-202ENST00000373162 IGIPA6NJ69 53 aa11.11□□□□□ -0.63
TRAPPC3-202ENST00000373162 K7EMI3 77 aa11.11□□□□□ -0.63
TRAPPC3-202ENST00000373162 NPSP0C0P6 89 aa11.11□□□□□ -0.63
TRAPPC3-202ENST00000373162 FAM19A3Q7Z5A8 133 aa11.11□□□□□ -0.63
TRAPPC3-202ENST00000373162 LINC01600Q96MT4 127 aa11.11□□□□□ -0.63
TRAPPC3-202ENST00000373162 C6orf48Q9UBA6 75 aa11.11□□□□□ -0.63
TRAPPC3-202ENST00000373162 C9orf116Q5BN46 136 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC3-202ENST00000373162 LINC01561Q8N1V8 128 aa11.1□□□□□ -0.63
TRAPPC3-202ENST00000373162 CYSLTR1Q9Y271 337 aa11.1□□□□□ -0.63
TRAPPC3-202ENST00000373162 COLCA2A8K830 154 aa11.09□□□□□ -0.63
TRAPPC3-202ENST00000373162 ZC2HC1BQ5TFG8 222 aa11.09□□□□□ -0.63
TRAPPC3-202ENST00000373162 UNQ6190/PRO20217Q6UXQ8 127 aa11.09□□□□□ -0.63
TRAPPC3-202ENST00000373162 Q6ZRP5 223 aa11.09□□□□□ -0.63
TRAPPC3-202ENST00000373162 ALKBH7Q9BT30 221 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC3-202ENST00000373162 NDUFA1O15239 70 aa11.08□□□□□ -0.64
TRAPPC3-202ENST00000373162 ORMDL2Q53FV1 153 aa11.08□□□□□ -0.64
TRAPPC3-202ENST00000373162 SPINK6Q6UWN8 80 aa11.08□□□□□ -0.64
TRAPPC3-202ENST00000373162 KRTAP7-1Q8IUC3 87 aa11.08□□□□□ -0.64
TRAPPC3-202ENST00000373162 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
TRAPPC3-202ENST00000373162 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
TRAPPC3-202ENST00000373162 TEX43Q6ZNM6 134 aa11.07□□□□□ -0.64
TRAPPC3-202ENST00000373162 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
TRAPPC3-202ENST00000373162 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
TRAPPC3-202ENST00000373162 KRTAP10-8P60410 259 aa11.05□□□□□ -0.64
TRAPPC3-202ENST00000373162 PSORS1C2Q9UIG4 136 aa11.05□□□□□ -0.64
TRAPPC3-202ENST00000373162 PHF5AQ7RTV0 110 aaKnown RBP11.04□□□□□ -0.64
TRAPPC3-202ENST00000373162 KRTAP11-1Q8IUC1 163 aa11.04□□□□□ -0.64
TRAPPC3-202ENST00000373162 TIMM17AQ99595 171 aa11.04□□□□□ -0.64
TRAPPC3-202ENST00000373162 C2orf82Q6UX34 121 aa11.03□□□□□ -0.64
TRAPPC3-202ENST00000373162 TOMM6Q96B49 74 aa11.03□□□□□ -0.64
TRAPPC3-202ENST00000373162 TRBV30A0A0K0K1B3 111 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms