RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 HECTD1Q9ULT8 2610 aa13.61□□□□□ -0.23
TMEM53-202ENST00000372237 NOTCH3Q9UM47 2321 aa13.61□□□□□ -0.23
TMEM53-202ENST00000372237 MTORP42345 2549 aa13.61□□□□□ -0.23
TMEM53-202ENST00000372237 TRGV2A0A075B6R0 118 aa13.6□□□□□ -0.23
TMEM53-202ENST00000372237 SNCGO76070 127 aa13.6□□□□□ -0.23
TMEM53-202ENST00000372237 TMEM243Q9BU79 118 aa13.6□□□□□ -0.23
TMEM53-202ENST00000372237 F5H768 121 aa13.59□□□□□ -0.23
TMEM53-202ENST00000372237 C16orf74Q96GX8 76 aa13.59□□□□□ -0.23
TMEM53-202ENST00000372237 GAGE7O76087 117 aa13.59□□□□□ -0.23
TMEM53-202ENST00000372237 GIG44P09565 113 aaPredicted RBP13.59□□□□□ -0.23
TMEM53-202ENST00000372237 GAGE12FP0CL80 117 aa13.59□□□□□ -0.23
TMEM53-202ENST00000372237 GAGE12GP0CL81 117 aa13.59□□□□□ -0.23
TMEM53-202ENST00000372237 GAGE12IP0CL82 117 aa13.59□□□□□ -0.23
TMEM53-202ENST00000372237 SOSTDC1Q6X4U4 206 aa13.59□□□□□ -0.23
TMEM53-202ENST00000372237 CITED1Q99966 193 aa13.59□□□□□ -0.23
TMEM53-202ENST00000372237 WFDC10AQ9H1F0 79 aa13.59□□□□□ -0.23
TMEM53-202ENST00000372237 ANK3Q12955 4377 aaKnown RBP13.59□□□□□ -0.23
TMEM53-202ENST00000372237 CMC4P56277 68 aaPredicted RBP13.58□□□□□ -0.23
TMEM53-202ENST00000372237 NOTCH2Q04721 2471 aa13.58□□□□□ -0.24
TMEM53-202ENST00000372237 PLAC8L1A1L4L8 177 aa13.57□□□□□ -0.24
TMEM53-202ENST00000372237 RPL35AP18077 110 aaKnown RBP13.57□□□□□ -0.24
TMEM53-202ENST00000372237 HERV-K104P63124 156 aa13.57□□□□□ -0.24
TMEM53-202ENST00000372237 LOC100131303A0A0U1RQF7 123 aa13.56□□□□□ -0.24
TMEM53-202ENST00000372237 CRLF1O75462 422 aa13.55□□□□□ -0.24
TMEM53-202ENST00000372237 LINC01006Q8NI28 216 aa13.55□□□□□ -0.24
TMEM53-202ENST00000372237 TRBV6-4A0A1B0GX49 114 aa13.55□□□□□ -0.24
TMEM53-202ENST00000372237 COX7A2LO14548 114 aa13.55□□□□□ -0.24
TMEM53-202ENST00000372237 GAGE2BQ13066 116 aa13.55□□□□□ -0.24
TMEM53-202ENST00000372237 GAGE2EQ4V326 116 aa13.55□□□□□ -0.24
TMEM53-202ENST00000372237 GAGE2DQ9UEU5 116 aa13.55□□□□□ -0.24
TMEM53-202ENST00000372237 C2CD3Q4AC94 2353 aa13.54□□□□□ -0.24
TMEM53-202ENST00000372237 TRGV4A0A0C4DH28 118 aa13.54□□□□□ -0.24
TMEM53-202ENST00000372237 ANAPC13Q9BS18 74 aa13.54□□□□□ -0.24
TMEM53-202ENST00000372237 TRAV26-1A0A087WT03 109 aa13.53□□□□□ -0.24
TMEM53-202ENST00000372237 SHISA2Q6UWI4 295 aa13.53□□□□□ -0.24
TMEM53-202ENST00000372237 SETD2Q9BYW2 2564 aaPredicted RBP13.53□□□□□ -0.24
TMEM53-202ENST00000372237 IGLV1-51P01701 117 aa13.52□□□□□ -0.25
TMEM53-202ENST00000372237 C15orf53Q8NAA6 179 aa13.52□□□□□ -0.25
TMEM53-202ENST00000372237 FAM110AQ9BQ89 295 aa13.52□□□□□ -0.25
TMEM53-202ENST00000372237 C19orf73Q9NVV2 129 aa13.52□□□□□ -0.25
TMEM53-202ENST00000372237 JMJD1CQ15652 2540 aa13.52□□□□□ -0.25
TMEM53-202ENST00000372237 IGKV3OR2-268A0A0C4DH90 116 aa13.51□□□□□ -0.25
TMEM53-202ENST00000372237 GAGE6Q13070 117 aa13.51□□□□□ -0.25
TMEM53-202ENST00000372237 DEFB121Q5J5C9 76 aa13.51□□□□□ -0.25
TMEM53-202ENST00000372237 CSNK1G2-AS1Q8NCQ2 148 aa13.51□□□□□ -0.25
TMEM53-202ENST00000372237 OVOL2Q9BRP0 275 aa13.51□□□□□ -0.25
TMEM53-202ENST00000372237 SETXQ7Z333 2677 aaKnown RBP13.5□□□□□ -0.25
TMEM53-202ENST00000372237 COX7B2Q8TF08 81 aa13.49□□□□□ -0.25
TMEM53-202ENST00000372237 C16orf95Q9H693 158 aa13.49□□□□□ -0.25
TMEM53-202ENST00000372237 TOMM7Q9P0U1 55 aa13.49□□□□□ -0.25
TMEM53-202ENST00000372237 FAM240AA0A1B0GVK7 77 aa13.48□□□□□ -0.25
TMEM53-202ENST00000372237 RNASE1P07998 156 aaKnown RBP13.48□□□□□ -0.25
TMEM53-202ENST00000372237 SMR3AQ99954 134 aa13.48□□□□□ -0.25
TMEM53-202ENST00000372237 HIVEP2P31629 2446 aa13.48□□□□□ -0.25
TMEM53-202ENST00000372237 PPDPFQ9H3Y8 114 aa13.47□□□□□ -0.25
TMEM53-202ENST00000372237 NIPBLQ6KC79 2804 aaeCLIP13.47□□□□□ -0.25
TMEM53-202ENST00000372237 IGLV4-60A0A075B6I1 120 aa13.47□□□□□ -0.25
TMEM53-202ENST00000372237 TRBV6-8A0A0A6YYG3 113 aa13.47□□□□□ -0.25
TMEM53-202ENST00000372237 Q6Q795 121 aa13.47□□□□□ -0.25
TMEM53-202ENST00000372237 FHL2Q14192 279 aa13.46□□□□□ -0.25
TMEM53-202ENST00000372237 TTC32Q5I0X7 151 aa13.46□□□□□ -0.25
TMEM53-202ENST00000372237 CHCHD5Q9BSY4 110 aa13.46□□□□□ -0.25
TMEM53-202ENST00000372237 MIR7-3HGQ8N6C7 128 aa13.46□□□□□ -0.26
TMEM53-202ENST00000372237 TRACP01848 142 aa13.45□□□□□ -0.26
TMEM53-202ENST00000372237 NDUFV3P56181 108 aaKnown RBP13.45□□□□□ -0.26
TMEM53-202ENST00000372237 TRAV13-2A0A0B4J235 113 aa13.44□□□□□ -0.26
TMEM53-202ENST00000372237 MRPL23Q16540 153 aaKnown RBP13.44□□□□□ -0.26
TMEM53-202ENST00000372237 CRPP02741 224 aa13.44□□□□□ -0.26
TMEM53-202ENST00000372237 PF4P02776 101 aa13.44□□□□□ -0.26
TMEM53-202ENST00000372237 OTOGQ6ZRI0 2925 aa13.43□□□□□ -0.26
TMEM53-202ENST00000372237 IGHV3OR16-9A0A0B4J2B5 98 aa13.42□□□□□ -0.26
TMEM53-202ENST00000372237 HILS1P60008 231 aa13.42□□□□□ -0.26
TMEM53-202ENST00000372237 NHLRC4P0CG21 123 aaPredicted RBP13.42□□□□□ -0.26
TMEM53-202ENST00000372237 LINC00158P58513 81 aa13.42□□□□□ -0.26
TMEM53-202ENST00000372237 FAM218AQ96MZ4 157 aa13.42□□□□□ -0.26
TMEM53-202ENST00000372237 SND1-IT1Q9HBX3 110 aa13.42□□□□□ -0.26
TMEM53-202ENST00000372237 FAM222AQ5U5X8 452 aa13.41□□□□□ -0.26
TMEM53-202ENST00000372237 LINC00337Q8N6G1 96 aa13.41□□□□□ -0.26
TMEM53-202ENST00000372237 BAALC-AS2P0C853 105 aa13.4□□□□□ -0.26
TMEM53-202ENST00000372237 DEFB130BP0DP73 79 aa13.4□□□□□ -0.26
TMEM53-202ENST00000372237 DEFB130AP0DP74 79 aa13.4□□□□□ -0.26
TMEM53-202ENST00000372237 RPL28P46779 137 aaKnown RBP13.4□□□□□ -0.26
TMEM53-202ENST00000372237 A0A087WZ39 114 aa13.39□□□□□ -0.27
TMEM53-202ENST00000372237 C5orf38Q86SI9 138 aa13.39□□□□□ -0.27
TMEM53-202ENST00000372237 IGKV2-28A0A075B6P5 120 aa13.39□□□□□ -0.27
TMEM53-202ENST00000372237 LY6G6DO95868 133 aa13.39□□□□□ -0.27
TMEM53-202ENST00000372237 IGKV2D-28P01615 120 aa13.39□□□□□ -0.27
TMEM53-202ENST00000372237 ACYP1P07311 99 aa13.38□□□□□ -0.27
TMEM53-202ENST00000372237 IBA57-AS1B1ANH7 110 aa13.36□□□□□ -0.27
TMEM53-202ENST00000372237 LINC00959A0A1B0GUT2 108 aa13.36□□□□□ -0.27
TMEM53-202ENST00000372237 PFN2P35080 140 aa13.36□□□□□ -0.27
TMEM53-202ENST00000372237 CCL18P55774 89 aa13.36□□□□□ -0.27
TMEM53-202ENST00000372237 KIR2DL5BQ8NHK3 375 aa13.35□□□□□ -0.27
TMEM53-202ENST00000372237 Q9HAA7 133 aa13.35□□□□□ -0.27
TMEM53-202ENST00000372237 GYPEP15421 78 aa13.34□□□□□ -0.27
TMEM53-202ENST00000372237 SMIM11BQ8TCY0 68 aa13.34□□□□□ -0.27
TMEM53-202ENST00000372237 C22orf24Q9Y442 160 aa13.33□□□□□ -0.28
TMEM53-202ENST00000372237 C6orf226Q5I0X4 101 aa13.33□□□□□ -0.28
TMEM53-202ENST00000372237 TRBV7-7A0A0K0K1E9 115 aa13.32□□□□□ -0.28
TMEM53-202ENST00000372237 C11orf68Q9H3H3 251 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms