RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 NTM-AS1Q6ZSK4 140 aa11.42□□□□□ -0.58
GTF3C4-201ENST00000372146 MAP6D1Q9H9H5 199 aa11.42□□□□□ -0.58
GTF3C4-201ENST00000372146 ZNF843Q8N446 348 aa11.41□□□□□ -0.58
GTF3C4-201ENST00000372146 M0QY20 66 aa11.41□□□□□ -0.58
GTF3C4-201ENST00000372146 ZFYVE26Q68DK2 2539 aa11.41□□□□□ -0.58
GTF3C4-201ENST00000372146 RNF185Q96GF1 192 aa11.41□□□□□ -0.58
GTF3C4-201ENST00000372146 M0R378 163 aa11.4□□□□□ -0.58
GTF3C4-201ENST00000372146 C11orf45Q8TAV5 145 aa11.4□□□□□ -0.58
GTF3C4-201ENST00000372146 RNASE3P12724 160 aaKnown RBP11.4□□□□□ -0.58
GTF3C4-201ENST00000372146 Q8N814 137 aa11.4□□□□□ -0.58
GTF3C4-201ENST00000372146 IGHV6-1A0A0B4J1U7 121 aa11.4□□□□□ -0.58
GTF3C4-201ENST00000372146 MBD6Q96DN6 1003 aa11.4□□□□□ -0.58
GTF3C4-201ENST00000372146 TRBV6-8A0A0A6YYG3 113 aa11.4□□□□□ -0.58
GTF3C4-201ENST00000372146 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.4□□□□□ -0.59
GTF3C4-201ENST00000372146 C7orf33Q8WU49 177 aa11.39□□□□□ -0.59
GTF3C4-201ENST00000372146 TMEM254Q8TBM7 123 aa11.39□□□□□ -0.59
GTF3C4-201ENST00000372146 Q9UF83 564 aa11.39□□□□□ -0.59
GTF3C4-201ENST00000372146 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.38□□□□□ -0.59
GTF3C4-201ENST00000372146 POLQO75417 2590 aa11.38□□□□□ -0.59
GTF3C4-201ENST00000372146 A0A087WYN8 130 aa11.38□□□□□ -0.59
GTF3C4-201ENST00000372146 CRIP2P52943 208 aaPredicted RBP11.38□□□□□ -0.59
GTF3C4-201ENST00000372146 ODF3L1Q8IXM7 274 aa11.38□□□□□ -0.59
GTF3C4-201ENST00000372146 C8orf87E5RJ46 101 aa11.37□□□□□ -0.59
GTF3C4-201ENST00000372146 PLA2G5P39877 138 aa11.37□□□□□ -0.59
GTF3C4-201ENST00000372146 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
GTF3C4-201ENST00000372146 ODF3Q96PU9 254 aa11.36□□□□□ -0.59
GTF3C4-201ENST00000372146 TRBV10-3A0A0K0K1G6 114 aa11.35□□□□□ -0.59
GTF3C4-201ENST00000372146 PRLHP81277 87 aa11.35□□□□□ -0.59
GTF3C4-201ENST00000372146 OXLD1Q5BKU9 147 aa11.35□□□□□ -0.59
GTF3C4-201ENST00000372146 A0A1B0GU69 56 aa11.35□□□□□ -0.59
GTF3C4-201ENST00000372146 PROK1P58294 105 aa11.35□□□□□ -0.59
GTF3C4-201ENST00000372146 HILS1P60008 231 aa11.35□□□□□ -0.59
GTF3C4-201ENST00000372146 C1orf137Q5JT78 98 aa11.34□□□□□ -0.59
GTF3C4-201ENST00000372146 SYCNQ0VAF6 134 aa11.34□□□□□ -0.59
GTF3C4-201ENST00000372146 C11orf1Q9H5F2 150 aa11.34□□□□□ -0.59
GTF3C4-201ENST00000372146 SMAD5-AS1Q9Y6J3 95 aa11.34□□□□□ -0.59
GTF3C4-201ENST00000372146 TNFRSF13BO14836 293 aaPredicted RBP11.34□□□□□ -0.59
GTF3C4-201ENST00000372146 LINC00575Q6W349 94 aa11.34□□□□□ -0.59
GTF3C4-201ENST00000372146 TSHBP01222 138 aa11.34□□□□□ -0.59
GTF3C4-201ENST00000372146 CRIP1P50238 77 aa11.33□□□□□ -0.6
GTF3C4-201ENST00000372146 SBSPONQ8IVN8 264 aa11.33□□□□□ -0.6
GTF3C4-201ENST00000372146 MDFIQ99750 246 aa11.33□□□□□ -0.6
GTF3C4-201ENST00000372146 CIRBP-AS1Q8TBR5 109 aa11.33□□□□□ -0.6
GTF3C4-201ENST00000372146 PKD1L2Q7Z442 2459 aa11.32□□□□□ -0.6
GTF3C4-201ENST00000372146 CD164L2Q6UWJ8 174 aa11.32□□□□□ -0.6
GTF3C4-201ENST00000372146 LRRK2Q5S007 2527 aa11.32□□□□□ -0.6
GTF3C4-201ENST00000372146 PLAC8L1A1L4L8 177 aa11.31□□□□□ -0.6
GTF3C4-201ENST00000372146 KRTAP27-1Q3LI81 207 aa11.31□□□□□ -0.6
GTF3C4-201ENST00000372146 CCDC140Q96MF4 163 aa11.31□□□□□ -0.6
GTF3C4-201ENST00000372146 HCG22E2RYF7 251 aa11.31□□□□□ -0.6
GTF3C4-201ENST00000372146 hDV103S1A0JD37 113 aa11.31□□□□□ -0.6
GTF3C4-201ENST00000372146 FAM215AQ9Y5M1 114 aa11.31□□□□□ -0.6
GTF3C4-201ENST00000372146 DEFB116Q30KQ4 102 aa11.29□□□□□ -0.6
GTF3C4-201ENST00000372146 C7orf65Q6ZTY9 151 aa11.29□□□□□ -0.6
GTF3C4-201ENST00000372146 MYCNOSP40205 109 aa11.29□□□□□ -0.6
GTF3C4-201ENST00000372146 IGFL3Q6UXB1 125 aa11.29□□□□□ -0.6
GTF3C4-201ENST00000372146 GRNP28799 593 aaKnown RBP11.29□□□□□ -0.6
GTF3C4-201ENST00000372146 IGF2-ASQ6U949 168 aa11.29□□□□□ -0.6
GTF3C4-201ENST00000372146 Q6ZSR3 168 aa11.29□□□□□ -0.6
GTF3C4-201ENST00000372146 LY6G6EA0A0G2JKS1 128 aa11.28□□□□□ -0.6
GTF3C4-201ENST00000372146 Q6ZSV7 163 aa11.28□□□□□ -0.6
GTF3C4-201ENST00000372146 DEFB131BA0A096LNP1 70 aa11.28□□□□□ -0.6
GTF3C4-201ENST00000372146 C1orf64Q8NEQ6 169 aa11.26□□□□□ -0.61
GTF3C4-201ENST00000372146 IGLV4-69A0A075B6H9 119 aa11.25□□□□□ -0.61
GTF3C4-201ENST00000372146 PRR3P79522 188 aaKnown RBP11.25□□□□□ -0.61
GTF3C4-201ENST00000372146 REG3GQ6UW15 175 aa11.25□□□□□ -0.61
GTF3C4-201ENST00000372146 COL27A1Q8IZC6 1860 aaPredicted RBP11.24□□□□□ -0.61
GTF3C4-201ENST00000372146 ZFP36P26651 326 aaKnown RBP11.24□□□□□ -0.61
GTF3C4-201ENST00000372146 TRBV6-4A0A1B0GX49 114 aa11.24□□□□□ -0.61
GTF3C4-201ENST00000372146 ATP11AUNQ6ZP68 121 aa11.23□□□□□ -0.61
GTF3C4-201ENST00000372146 TMEM89A2RUT3 159 aa11.22□□□□□ -0.61
GTF3C4-201ENST00000372146 DEFB113Q30KQ7 82 aa11.22□□□□□ -0.61
GTF3C4-201ENST00000372146 IGLV2-11P01706 119 aa11.22□□□□□ -0.61
GTF3C4-201ENST00000372146 Q8IZM0 81 aa11.22□□□□□ -0.61
GTF3C4-201ENST00000372146 LINC00959A0A1B0GUT2 108 aa11.22□□□□□ -0.61
GTF3C4-201ENST00000372146 RPS28P62857 69 aaKnown RBP11.22□□□□□ -0.61
GTF3C4-201ENST00000372146 IGLV8-61A0A075B6I0 122 aa11.21□□□□□ -0.61
GTF3C4-201ENST00000372146 C9orf116Q5BN46 136 aaPredicted RBP11.21□□□□□ -0.61
GTF3C4-201ENST00000372146 CDIP1Q9H305 208 aa11.21□□□□□ -0.61
GTF3C4-201ENST00000372146 FN1P02751 2386 aaKnown RBP11.21□□□□□ -0.61
GTF3C4-201ENST00000372146 Q8N7P7 452 aa11.21□□□□□ -0.62
GTF3C4-201ENST00000372146 SSBP3-AS1Q7Z2R9 100 aa11.21□□□□□ -0.62
GTF3C4-201ENST00000372146 LINC00846Q9NV44 126 aa11.2□□□□□ -0.62
GTF3C4-201ENST00000372146 P0C879 139 aa11.2□□□□□ -0.62
GTF3C4-201ENST00000372146 LINC00474Q9P2X8 69 aa11.2□□□□□ -0.62
GTF3C4-201ENST00000372146 GAS8-AS1O95177 125 aa11.19□□□□□ -0.62
GTF3C4-201ENST00000372146 IGLV1-47P01700 117 aa11.19□□□□□ -0.62
GTF3C4-201ENST00000372146 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
GTF3C4-201ENST00000372146 BBC3Q96PG8 261 aaPredicted RBP11.18□□□□□ -0.62
GTF3C4-201ENST00000372146 SMIM29Q86T20 159 aa11.18□□□□□ -0.62
GTF3C4-201ENST00000372146 CYSRT1A8MQ03 144 aa11.18□□□□□ -0.62
GTF3C4-201ENST00000372146 MSMPQ1L6U9 139 aa11.17□□□□□ -0.62
GTF3C4-201ENST00000372146 ACYP2P14621 99 aa11.17□□□□□ -0.62
GTF3C4-201ENST00000372146 Q9BRP9 147 aa11.17□□□□□ -0.62
GTF3C4-201ENST00000372146 TLN1Q9Y490 2541 aaKnown RBP11.17□□□□□ -0.62
GTF3C4-201ENST00000372146 PRM2P04554 102 aa11.16□□□□□ -0.62
GTF3C4-201ENST00000372146 ADAMTSL4-AS1Q5T5F5 129 aa11.16□□□□□ -0.62
GTF3C4-201ENST00000372146 IGKV2D-30A0A075B6S6 120 aa11.16□□□□□ -0.62
GTF3C4-201ENST00000372146 IGKV2-30P06310 120 aa11.16□□□□□ -0.62
GTF3C4-201ENST00000372146 ZNF295-AS1Q8N0V1 137 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms