RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 DEFB130BP0DP73 79 aa20.4■□□□□ 0.86
SSBP3-204ENST00000371320 DEFB130AP0DP74 79 aa20.4■□□□□ 0.86
SSBP3-204ENST00000371320 FOXI1Q12951 378 aa20.4■□□□□ 0.86
SSBP3-204ENST00000371320 TRBV30A0A0K0K1B3 111 aa20.39■□□□□ 0.86
SSBP3-204ENST00000371320 F5H768 121 aa20.39■□□□□ 0.86
SSBP3-204ENST00000371320 GAGE6Q13070 117 aa20.39■□□□□ 0.85
SSBP3-204ENST00000371320 KIR2DL5BQ8NHK3 375 aa20.38■□□□□ 0.85
SSBP3-204ENST00000371320 ZNF625Q96I27 306 aaPredicted RBP20.38■□□□□ 0.85
SSBP3-204ENST00000371320 TRBV6-8A0A0A6YYG3 113 aa20.38■□□□□ 0.85
SSBP3-204ENST00000371320 INAFM1C9JVW0 142 aa20.37■□□□□ 0.85
SSBP3-204ENST00000371320 TRIAP1O43715 76 aa20.37■□□□□ 0.85
SSBP3-204ENST00000371320 TEN1Q86WV5 123 aa20.36■□□□□ 0.85
SSBP3-204ENST00000371320 GAGE12HA6NDE8 117 aa20.36■□□□□ 0.85
SSBP3-204ENST00000371320 ATXN8Q156A1 80 aa20.35■□□□□ 0.85
SSBP3-204ENST00000371320 PRIMA1Q86XR5 153 aa20.34■□□□□ 0.85
SSBP3-204ENST00000371320 ICOSQ9Y6W8 199 aa20.34■□□□□ 0.85
SSBP3-204ENST00000371320 C9JAW5 83 aa20.34■□□□□ 0.85
SSBP3-204ENST00000371320 CHCHD5Q9BSY4 110 aa20.34■□□□□ 0.85
SSBP3-204ENST00000371320 C9orf66Q5T8R8 295 aa20.33■□□□□ 0.85
SSBP3-204ENST00000371320 LINC00612Q8N6U2 182 aa20.33■□□□□ 0.85
SSBP3-204ENST00000371320 LINC00308Q8TCZ7 52 aa20.33■□□□□ 0.85
SSBP3-204ENST00000371320 NOTCH2Q04721 2471 aa20.33■□□□□ 0.84
SSBP3-204ENST00000371320 A0A0U1RRA0 63 aa20.33■□□□□ 0.84
SSBP3-204ENST00000371320 SLC25A20O43772 301 aa20.33■□□□□ 0.84
SSBP3-204ENST00000371320 PPDPFLQ8WWR9 84 aa20.32■□□□□ 0.84
SSBP3-204ENST00000371320 X6R8D5 127 aa20.32■□□□□ 0.84
SSBP3-204ENST00000371320 SPATA3Q8NHX4 192 aa20.31■□□□□ 0.84
SSBP3-204ENST00000371320 OTOGQ6ZRI0 2925 aa20.31■□□□□ 0.84
SSBP3-204ENST00000371320 IGLV4-60A0A075B6I1 120 aa20.31■□□□□ 0.84
SSBP3-204ENST00000371320 SPATA25Q9BR10 227 aa20.31■□□□□ 0.84
SSBP3-204ENST00000371320 IGKV3OR2-268A0A0C4DH90 116 aa20.3■□□□□ 0.84
SSBP3-204ENST00000371320 HERV-K104P63124 156 aa20.3■□□□□ 0.84
SSBP3-204ENST00000371320 MEIG1Q5JSS6 88 aa20.3■□□□□ 0.84
SSBP3-204ENST00000371320 SMIM9A6NGZ8 99 aa20.3■□□□□ 0.84
SSBP3-204ENST00000371320 RPL13AP40429 203 aaKnown RBP20.3■□□□□ 0.84
SSBP3-204ENST00000371320 SIGMAR1Q99720 223 aa20.3■□□□□ 0.84
SSBP3-204ENST00000371320 COX6CP09669 75 aa20.29■□□□□ 0.84
SSBP3-204ENST00000371320 ANKRD29Q8N6D5 301 aa20.29■□□□□ 0.84
SSBP3-204ENST00000371320 CARD19Q96LW7 228 aa20.29■□□□□ 0.84
SSBP3-204ENST00000371320 FN1P02751 2386 aaKnown RBP20.29■□□□□ 0.84
SSBP3-204ENST00000371320 COPS9Q8WXC6 57 aa20.28■□□□□ 0.84
SSBP3-204ENST00000371320 M0QXV9 152 aa20.28■□□□□ 0.84
SSBP3-204ENST00000371320 LINC01620Q4KN68 170 aa20.28■□□□□ 0.84
SSBP3-204ENST00000371320 GYPEP15421 78 aa20.26■□□□□ 0.83
SSBP3-204ENST00000371320 SOSTDC1Q6X4U4 206 aa20.23■□□□□ 0.83
SSBP3-204ENST00000371320 COX7B2Q8TF08 81 aa20.23■□□□□ 0.83
SSBP3-204ENST00000371320 VWFP04275 2813 aa20.21■□□□□ 0.83
SSBP3-204ENST00000371320 FAM222AQ5U5X8 452 aa20.21■□□□□ 0.83
SSBP3-204ENST00000371320 PRO0255Q9UI72 69 aa20.21■□□□□ 0.83
SSBP3-204ENST00000371320 IGHV3OR16-9A0A0B4J2B5 98 aa20.2■□□□□ 0.82
SSBP3-204ENST00000371320 TOMM7Q9P0U1 55 aa20.19■□□□□ 0.82
SSBP3-204ENST00000371320 TRBV10-2A0A0K0K1G8 114 aa20.18■□□□□ 0.82
SSBP3-204ENST00000371320 NSD1Q96L73 2696 aaPredicted RBP20.18■□□□□ 0.82
SSBP3-204ENST00000371320 LYRM9A8MSI8 78 aa20.18■□□□□ 0.82
SSBP3-204ENST00000371320 DEFB135Q30KP9 77 aa20.18■□□□□ 0.82
SSBP3-204ENST00000371320 CLEC2BQ92478 149 aa20.18■□□□□ 0.82
SSBP3-204ENST00000371320 TMEM262E9PQX1 116 aa20.16■□□□□ 0.82
SSBP3-204ENST00000371320 APOC4P55056 127 aa20.15■□□□□ 0.82
SSBP3-204ENST00000371320 LINC01600Q96MT4 127 aa20.15■□□□□ 0.82
SSBP3-204ENST00000371320 A0A087WZ39 114 aa20.15■□□□□ 0.82
SSBP3-204ENST00000371320 LINC00959A0A1B0GUT2 108 aa20.15■□□□□ 0.82
SSBP3-204ENST00000371320 PAX4O43316 350 aa20.14■□□□□ 0.81
SSBP3-204ENST00000371320 CDIP1Q9H305 208 aa20.14■□□□□ 0.81
SSBP3-204ENST00000371320 NBEAL2Q6ZNJ1 2754 aa20.14■□□□□ 0.81
SSBP3-204ENST00000371320 LST1O00453 97 aa20.14■□□□□ 0.81
SSBP3-204ENST00000371320 CITED1Q99966 193 aa20.14■□□□□ 0.81
SSBP3-204ENST00000371320 PPDPFQ9H3Y8 114 aa20.14■□□□□ 0.81
SSBP3-204ENST00000371320 DEFB4AO15263 64 aa20.13■□□□□ 0.81
SSBP3-204ENST00000371320 C5orf38Q86SI9 138 aa20.13■□□□□ 0.81
SSBP3-204ENST00000371320 A0A096LPF7 62 aa20.12■□□□□ 0.81
SSBP3-204ENST00000371320 NTN5Q8WTR8 489 aaPredicted RBP20.12■□□□□ 0.81
SSBP3-204ENST00000371320 A0A1B0GUV1 79 aa20.11■□□□□ 0.81
SSBP3-204ENST00000371320 C2orf82Q6UX34 121 aa20.11■□□□□ 0.81
SSBP3-204ENST00000371320 IGHV4-28A0A0C4DH34 117 aa20.09■□□□□ 0.81
SSBP3-204ENST00000371320 TENM1Q9UKZ4 2725 aa20.09■□□□□ 0.81
SSBP3-204ENST00000371320 SCGB1A1P11684 91 aa20.09■□□□□ 0.81
SSBP3-204ENST00000371320 MIR7-3HGQ8N6C7 128 aa20.09■□□□□ 0.81
SSBP3-204ENST00000371320 SS18Q15532 418 aa20.07■□□□□ 0.8
SSBP3-204ENST00000371320 SHISA2Q6UWI4 295 aa20.07■□□□□ 0.8
SSBP3-204ENST00000371320 H3BT86 120 aa20.06■□□□□ 0.8
SSBP3-204ENST00000371320 XCL1P47992 114 aa20.06■□□□□ 0.8
SSBP3-204ENST00000371320 LINC00158P58513 81 aa20.06■□□□□ 0.8
SSBP3-204ENST00000371320 DAD1P61803 113 aa20.06■□□□□ 0.8
SSBP3-204ENST00000371320 COX7A2LO14548 114 aa20.04■□□□□ 0.8
SSBP3-204ENST00000371320 HIVEP1P15822 2718 aa20.04■□□□□ 0.8
SSBP3-204ENST00000371320 TEX49A0A1B0GTD5 131 aa20.03■□□□□ 0.8
SSBP3-204ENST00000371320 CLPSL2Q6UWE3 100 aa20.03■□□□□ 0.8
SSBP3-204ENST00000371320 IBA57-AS1B1ANH7 110 aa20.02■□□□□ 0.8
SSBP3-204ENST00000371320 UBE2WQ96B02 151 aa20.02■□□□□ 0.8
SSBP3-204ENST00000371320 TRAV13-2A0A0B4J235 113 aa20.01■□□□□ 0.79
SSBP3-204ENST00000371320 MIFP14174 115 aa20.01■□□□□ 0.79
SSBP3-204ENST00000371320 C6orf226Q5I0X4 101 aa20.01■□□□□ 0.79
SSBP3-204ENST00000371320 SND1-IT1Q9HBX3 110 aa20.01■□□□□ 0.79
SSBP3-204ENST00000371320 Q8NAQ8 132 aa20■□□□□ 0.79
SSBP3-204ENST00000371320 WFDC9Q8NEX5 89 aa20■□□□□ 0.79
SSBP3-204ENST00000371320 CELA1Q9UNI1 258 aa19.99■□□□□ 0.79
SSBP3-204ENST00000371320 ATP5G1P05496 136 aa19.98■□□□□ 0.79
SSBP3-204ENST00000371320 CRPP02741 224 aa19.98■□□□□ 0.79
SSBP3-204ENST00000371320 PFN2P35080 140 aa19.98■□□□□ 0.79
SSBP3-204ENST00000371320 XGP55808 180 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms