RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 INAFM2P0DMQ5 153 aa6.69□□□□□ -1.34
SMARCA1-202ENST00000371122 IFITM1P13164 125 aa6.69□□□□□ -1.34
SMARCA1-202ENST00000371122 MRPL23Q16540 153 aaKnown RBP6.69□□□□□ -1.34
SMARCA1-202ENST00000371122 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
SMARCA1-202ENST00000371122 SPAG11BQ08648 103 aa6.69□□□□□ -1.34
SMARCA1-202ENST00000371122 C9orf66Q5T8R8 295 aa6.69□□□□□ -1.34
SMARCA1-202ENST00000371122 NBEAL2Q6ZNJ1 2754 aa6.68□□□□□ -1.34
SMARCA1-202ENST00000371122 A0A096LNI7 61 aa6.68□□□□□ -1.34
SMARCA1-202ENST00000371122 C14orf132Q9NPU4 83 aa6.68□□□□□ -1.34
SMARCA1-202ENST00000371122 UBL5Q9BZL1 73 aa6.68□□□□□ -1.34
SMARCA1-202ENST00000371122 PRO0255Q9UI72 69 aa6.68□□□□□ -1.34
SMARCA1-202ENST00000371122 hADV29S1A0JD25 119 aa6.67□□□□□ -1.34
SMARCA1-202ENST00000371122 G3V4G9 280 aa6.67□□□□□ -1.34
SMARCA1-202ENST00000371122 TSHBP01222 138 aa6.67□□□□□ -1.34
SMARCA1-202ENST00000371122 OXLD1Q5BKU9 147 aa6.67□□□□□ -1.34
SMARCA1-202ENST00000371122 U3KQK5 164 aa6.67□□□□□ -1.34
SMARCA1-202ENST00000371122 IGKV2-24A0A0C4DH68 120 aa6.67□□□□□ -1.34
SMARCA1-202ENST00000371122 FLNCQ14315 2725 aa6.67□□□□□ -1.34
SMARCA1-202ENST00000371122 MED14OSP0DP75 135 aa6.67□□□□□ -1.34
SMARCA1-202ENST00000371122 Q9UF83 564 aa6.67□□□□□ -1.34
SMARCA1-202ENST00000371122 LRBAP50851 2863 aa6.67□□□□□ -1.34
SMARCA1-202ENST00000371122 KLLNB2CW77 178 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 IGLV1-40P01703 118 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 POLR2KP53803 58 aaKnown RBP6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 FAM236AA0A1B0GUQ0 79 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 FAM236BA0A1B0GV22 79 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 TRIAP1O43715 76 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 POM121L12Q8N7R1 296 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 DSCR8Q96T75 97 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 F8WEM9 126 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 UBE2BP63146 152 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 TM2D2Q9BX73 214 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 TRBV27A0A0K0K1C4 114 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 ODF3L2Q3SX64 289 aa6.66□□□□□ -1.34
SMARCA1-202ENST00000371122 LY6G6DO95868 133 aa6.65□□□□□ -1.35
SMARCA1-202ENST00000371122 ORMDL1Q9P0S3 153 aa6.65□□□□□ -1.35
SMARCA1-202ENST00000371122 TMEM223A0PJW6 202 aa6.65□□□□□ -1.35
SMARCA1-202ENST00000371122 GCN1Q92616 2671 aaKnown RBP6.65□□□□□ -1.35
SMARCA1-202ENST00000371122 TRACP01848 142 aa6.64□□□□□ -1.35
SMARCA1-202ENST00000371122 TSPEAR-AS2P59090 65 aa6.64□□□□□ -1.35
SMARCA1-202ENST00000371122 TRBV10-1A0A0K0K1A3 114 aa6.64□□□□□ -1.35
SMARCA1-202ENST00000371122 HERV-K104P63124 156 aa6.64□□□□□ -1.35
SMARCA1-202ENST00000371122 MIAQ16674 131 aa6.64□□□□□ -1.35
SMARCA1-202ENST00000371122 Q6ZSN1 163 aa6.64□□□□□ -1.35
SMARCA1-202ENST00000371122 LINC00694P0DN24 101 aa6.64□□□□□ -1.35
SMARCA1-202ENST00000371122 SCXQ7RTU7 201 aa6.64□□□□□ -1.35
SMARCA1-202ENST00000371122 SPANXB1Q9NS25 103 aaPredicted RBP6.64□□□□□ -1.35
SMARCA1-202ENST00000371122 REG3AQ06141 175 aa6.63□□□□□ -1.35
SMARCA1-202ENST00000371122 SMIM20Q8N5G0 67 aa6.63□□□□□ -1.35
SMARCA1-202ENST00000371122 RNF152Q8N8N0 203 aa6.63□□□□□ -1.35
SMARCA1-202ENST00000371122 TMEM89A2RUT3 159 aa6.63□□□□□ -1.35
SMARCA1-202ENST00000371122 PSMG3-AS1Q96PY0 264 aa6.63□□□□□ -1.35
SMARCA1-202ENST00000371122 CRYBG3Q68DQ2 2970 aa6.63□□□□□ -1.35
SMARCA1-202ENST00000371122 TRBV10-2A0A0K0K1G8 114 aa6.63□□□□□ -1.35
SMARCA1-202ENST00000371122 GHRHP01286 108 aa6.63□□□□□ -1.35
SMARCA1-202ENST00000371122 LINC00308Q8TCZ7 52 aa6.63□□□□□ -1.35
SMARCA1-202ENST00000371122 CHCHD10Q8WYQ3 142 aaPredicted RBP6.63□□□□□ -1.35
SMARCA1-202ENST00000371122 PRR3P79522 188 aaKnown RBP6.62□□□□□ -1.35
SMARCA1-202ENST00000371122 OVOL2Q9BRP0 275 aa6.62□□□□□ -1.35
SMARCA1-202ENST00000371122 COL6A5A8TX70 2615 aa6.62□□□□□ -1.35
SMARCA1-202ENST00000371122 C9orf116Q5BN46 136 aaPredicted RBP6.61□□□□□ -1.35
SMARCA1-202ENST00000371122 RNF183Q96D59 192 aa6.61□□□□□ -1.35
SMARCA1-202ENST00000371122 RETNQ9HD89 108 aa6.61□□□□□ -1.35
SMARCA1-202ENST00000371122 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
SMARCA1-202ENST00000371122 TRBV6-8A0A0A6YYG3 113 aa6.61□□□□□ -1.35
SMARCA1-202ENST00000371122 A0A1B0GX51 115 aa6.61□□□□□ -1.35
SMARCA1-202ENST00000371122 IGIPA6NJ69 53 aa6.61□□□□□ -1.35
SMARCA1-202ENST00000371122 SDIM1Q6ZPB5 146 aa6.6□□□□□ -1.35
SMARCA1-202ENST00000371122 C9orf85Q96MD7 179 aa6.6□□□□□ -1.35
SMARCA1-202ENST00000371122 CCL18P55774 89 aa6.6□□□□□ -1.35
SMARCA1-202ENST00000371122 ZMAT4Q9H898 229 aa6.6□□□□□ -1.35
SMARCA1-202ENST00000371122 ETDCA0A1B0GVM5 59 aa6.6□□□□□ -1.35
SMARCA1-202ENST00000371122 COX6A2Q02221 97 aa6.6□□□□□ -1.35
SMARCA1-202ENST00000371122 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
SMARCA1-202ENST00000371122 NBPF19A0A087WUL8 3843 aa6.6□□□□□ -1.35
SMARCA1-202ENST00000371122 IGLV2-18A0A075B6J9 118 aa6.59□□□□□ -1.35
SMARCA1-202ENST00000371122 NDUFA1O15239 70 aa6.59□□□□□ -1.35
SMARCA1-202ENST00000371122 UBE2D4Q9Y2X8 147 aa6.59□□□□□ -1.35
SMARCA1-202ENST00000371122 C6orf99Q4VX62 202 aa6.59□□□□□ -1.35
SMARCA1-202ENST00000371122 CLUHP3Q96NS8 147 aa6.59□□□□□ -1.35
SMARCA1-202ENST00000371122 IGLV4-60A0A075B6I1 120 aa6.59□□□□□ -1.36
SMARCA1-202ENST00000371122 TRAV23DV6A0A075B6W5 121 aa6.59□□□□□ -1.36
SMARCA1-202ENST00000371122 ADAMTSL4-AS1Q5T5F5 129 aa6.59□□□□□ -1.36
SMARCA1-202ENST00000371122 SPATA25Q9BR10 227 aa6.59□□□□□ -1.36
SMARCA1-202ENST00000371122 BRI3O95415 125 aa6.58□□□□□ -1.36
SMARCA1-202ENST00000371122 C1orf158Q8N1D5 194 aa6.58□□□□□ -1.36
SMARCA1-202ENST00000371122 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.58□□□□□ -1.36
SMARCA1-202ENST00000371122 UNC79Q9P2D8 2635 aa6.58□□□□□ -1.36
SMARCA1-202ENST00000371122 IGKV2-28A0A075B6P5 120 aa6.58□□□□□ -1.36
SMARCA1-202ENST00000371122 IGKV2D-28P01615 120 aa6.58□□□□□ -1.36
SMARCA1-202ENST00000371122 HIGD2AQ9BW72 106 aa6.58□□□□□ -1.36
SMARCA1-202ENST00000371122 C11orf45Q8TAV5 145 aa6.58□□□□□ -1.36
SMARCA1-202ENST00000371122 BAHCC1Q9P281 2608 aa6.57□□□□□ -1.36
SMARCA1-202ENST00000371122 H0YGX0 51 aa6.57□□□□□ -1.36
SMARCA1-202ENST00000371122 LINC00242Q5T6M2 205 aa6.57□□□□□ -1.36
SMARCA1-202ENST00000371122 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
SMARCA1-202ENST00000371122 DEFB131BA0A096LNP1 70 aa6.57□□□□□ -1.36
SMARCA1-202ENST00000371122 ODF3Q96PU9 254 aa6.57□□□□□ -1.36
SMARCA1-202ENST00000371122 IGLV4-69A0A075B6H9 119 aa6.57□□□□□ -1.36
SMARCA1-202ENST00000371122 TRBV6-5A0A0K0K1A5 114 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms