RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 LEPROTO15243 131 aa9.19□□□□□ -0.94
GPC3-201ENST00000370818 FAM19A5Q7Z5A7 132 aaPredicted RBP9.19□□□□□ -0.94
GPC3-201ENST00000370818 LINC00482Q8N8I6 264 aa9.19□□□□□ -0.94
GPC3-201ENST00000370818 OPRPNQ99935 248 aaPredicted RBP9.19□□□□□ -0.94
GPC3-201ENST00000370818 IGHV3-53P01767 116 aa9.18□□□□□ -0.94
GPC3-201ENST00000370818 KLK5Q9Y337 293 aaPredicted RBP9.18□□□□□ -0.94
GPC3-201ENST00000370818 HIVEP1P15822 2718 aa9.18□□□□□ -0.94
GPC3-201ENST00000370818 UQCRQO14949 82 aa9.18□□□□□ -0.94
GPC3-201ENST00000370818 LINC00526Q96FQ7 95 aa9.18□□□□□ -0.94
GPC3-201ENST00000370818 ICOSQ9Y6W8 199 aa9.18□□□□□ -0.94
GPC3-201ENST00000370818 PF4P02776 101 aa9.18□□□□□ -0.94
GPC3-201ENST00000370818 RPL35AP18077 110 aaKnown RBP9.18□□□□□ -0.94
GPC3-201ENST00000370818 TRGV1A0A0A0MS02 117 aa9.17□□□□□ -0.94
GPC3-201ENST00000370818 A0A1B0GX51 115 aa9.17□□□□□ -0.94
GPC3-201ENST00000370818 J3KT08 172 aa9.17□□□□□ -0.94
GPC3-201ENST00000370818 CSNK1G2-AS1Q8NCQ2 148 aa9.17□□□□□ -0.94
GPC3-201ENST00000370818 Q6ZTI0 123 aa9.16□□□□□ -0.94
GPC3-201ENST00000370818 SPATA3Q8NHX4 192 aa9.16□□□□□ -0.94
GPC3-201ENST00000370818 CLEC2BQ92478 149 aa9.16□□□□□ -0.94
GPC3-201ENST00000370818 IGHV3-64A0A075B6Q5 118 aa9.16□□□□□ -0.94
GPC3-201ENST00000370818 A0A0J9YXY3 114 aa9.16□□□□□ -0.94
GPC3-201ENST00000370818 PLAC8L1A1L4L8 177 aa9.16□□□□□ -0.94
GPC3-201ENST00000370818 NOTCH3Q9UM47 2321 aa9.15□□□□□ -0.94
GPC3-201ENST00000370818 LST1O00453 97 aa9.15□□□□□ -0.94
GPC3-201ENST00000370818 WIPF1O43516 503 aa9.15□□□□□ -0.94
GPC3-201ENST00000370818 COX6CP09669 75 aa9.15□□□□□ -0.94
GPC3-201ENST00000370818 FAM104AQ969W3 186 aa9.15□□□□□ -0.94
GPC3-201ENST00000370818 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.95
GPC3-201ENST00000370818 LITAFQ99732 161 aa9.15□□□□□ -0.95
GPC3-201ENST00000370818 SPANXDQ9BXN6 97 aa9.15□□□□□ -0.95
GPC3-201ENST00000370818 ACYP1P07311 99 aa9.14□□□□□ -0.95
GPC3-201ENST00000370818 SMCR5Q8TEV8 140 aa9.14□□□□□ -0.95
GPC3-201ENST00000370818 CHCHD7Q9BUK0 85 aa9.14□□□□□ -0.95
GPC3-201ENST00000370818 RPS28P62857 69 aaKnown RBP9.14□□□□□ -0.95
GPC3-201ENST00000370818 DAZ2Q13117 558 aaKnown RBP9.14□□□□□ -0.95
GPC3-201ENST00000370818 NOP10Q9NPE3 64 aaKnown RBP9.14□□□□□ -0.95
GPC3-201ENST00000370818 IGHV3-38A0A0C4DH36 116 aa9.13□□□□□ -0.95
GPC3-201ENST00000370818 PYGO1Q9Y3Y4 419 aa9.13□□□□□ -0.95
GPC3-201ENST00000370818 PRSS2P07478 247 aa9.13□□□□□ -0.95
GPC3-201ENST00000370818 VWFP04275 2813 aa9.12□□□□□ -0.95
GPC3-201ENST00000370818 LINC00643Q86TS7 51 aa9.12□□□□□ -0.95
GPC3-201ENST00000370818 C16orf74Q96GX8 76 aa9.12□□□□□ -0.95
GPC3-201ENST00000370818 ADAMTSL4-AS1Q5T5F5 129 aa9.12□□□□□ -0.95
GPC3-201ENST00000370818 TRAV8-3A0A0A6YYJ7 113 aa9.11□□□□□ -0.95
GPC3-201ENST00000370818 ATP5G1P05496 136 aa9.11□□□□□ -0.95
GPC3-201ENST00000370818 COX7CP15954 63 aa9.11□□□□□ -0.95
GPC3-201ENST00000370818 C2orf48Q96LS8 159 aa9.11□□□□□ -0.95
GPC3-201ENST00000370818 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.1□□□□□ -0.95
GPC3-201ENST00000370818 IGKV2-29A2NJV5 120 aaPredicted RBP9.1□□□□□ -0.95
GPC3-201ENST00000370818 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
GPC3-201ENST00000370818 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.1□□□□□ -0.95
GPC3-201ENST00000370818 UBE2D4Q9Y2X8 147 aa9.1□□□□□ -0.95
GPC3-201ENST00000370818 TENM1Q9UKZ4 2725 aa9.1□□□□□ -0.95
GPC3-201ENST00000370818 A0A0J9YXV3 536 aa9.1□□□□□ -0.95
GPC3-201ENST00000370818 CRYGAP11844 174 aa9.1□□□□□ -0.95
GPC3-201ENST00000370818 GAGE2AQ6NT46 116 aa9.1□□□□□ -0.95
GPC3-201ENST00000370818 C5orf38Q86SI9 138 aa9.1□□□□□ -0.95
GPC3-201ENST00000370818 K7EQD1 137 aa9.09□□□□□ -0.95
GPC3-201ENST00000370818 OVOL2Q9BRP0 275 aa9.09□□□□□ -0.95
GPC3-201ENST00000370818 IGHV3-30-3P0DP02 117 aa9.09□□□□□ -0.95
GPC3-201ENST00000370818 RNASE13Q5GAN3 156 aaKnown RBP9.09□□□□□ -0.95
GPC3-201ENST00000370818 OR13C6PQ8NH95 151 aa9.09□□□□□ -0.95
GPC3-201ENST00000370818 TRBV10-1A0A0K0K1A3 114 aa9.08□□□□□ -0.96
GPC3-201ENST00000370818 SPANXCQ9NY87 97 aa9.08□□□□□ -0.96
GPC3-201ENST00000370818 C9orf66Q5T8R8 295 aa9.07□□□□□ -0.96
GPC3-201ENST00000370818 TRGV2A0A075B6R0 118 aa9.07□□□□□ -0.96
GPC3-201ENST00000370818 CXCL5P42830 114 aa9.07□□□□□ -0.96
GPC3-201ENST00000370818 TRRAPQ9Y4A5 3859 aa9.06□□□□□ -0.96
GPC3-201ENST00000370818 NPC2P61916 151 aa9.06□□□□□ -0.96
GPC3-201ENST00000370818 MRPS36P82909 103 aaKnown RBP9.06□□□□□ -0.96
GPC3-201ENST00000370818 RPL36AP83881 106 aaKnown RBP9.06□□□□□ -0.96
GPC3-201ENST00000370818 RPL36ALQ969Q0 106 aaKnown RBP9.06□□□□□ -0.96
GPC3-201ENST00000370818 MIAQ16674 131 aa9.06□□□□□ -0.96
GPC3-201ENST00000370818 NTM-AS1Q6ZSK4 140 aa9.06□□□□□ -0.96
GPC3-201ENST00000370818 TIMM21Q9BVV7 248 aa9.06□□□□□ -0.96
GPC3-201ENST00000370818 CYSTM1Q9H1C7 97 aa9.06□□□□□ -0.96
GPC3-201ENST00000370818 hADV29S1A0JD25 119 aa9.05□□□□□ -0.96
GPC3-201ENST00000370818 HIST1H4AP62805 103 aaKnown RBP9.05□□□□□ -0.96
GPC3-201ENST00000370818 DAZ4Q86SG3 579 aaKnown RBP9.05□□□□□ -0.96
GPC3-201ENST00000370818 DAZ3Q9NR90 486 aaKnown RBP9.05□□□□□ -0.96
GPC3-201ENST00000370818 ATRQ13535 2644 aa9.04□□□□□ -0.96
GPC3-201ENST00000370818 DPH3Q96FX2 82 aa9.04□□□□□ -0.96
GPC3-201ENST00000370818 NDUFA12Q9UI09 145 aa9.04□□□□□ -0.96
GPC3-201ENST00000370818 LOC100131303A0A0U1RQF7 123 aa9.03□□□□□ -0.96
GPC3-201ENST00000370818 TRBV6-4A0A1B0GX49 114 aa9.03□□□□□ -0.96
GPC3-201ENST00000370818 X6R8D5 127 aa9.03□□□□□ -0.96
GPC3-201ENST00000370818 TRACP01848 142 aa9.03□□□□□ -0.96
GPC3-201ENST00000370818 KIR2DL5BQ8NHK3 375 aa9.03□□□□□ -0.96
GPC3-201ENST00000370818 IGHV1-58A0A0C4DH39 117 aa9.02□□□□□ -0.97
GPC3-201ENST00000370818 FHL2Q14192 279 aa9.02□□□□□ -0.97
GPC3-201ENST00000370818 F8P00451 2351 aa9.02□□□□□ -0.97
GPC3-201ENST00000370818 TINCRA0A1B0GVN0 87 aa9.02□□□□□ -0.97
GPC3-201ENST00000370818 TEP1Q99973 2627 aaKnown RBP9.01□□□□□ -0.97
GPC3-201ENST00000370818 A8MZ25 164 aa9.01□□□□□ -0.97
GPC3-201ENST00000370818 ATOX1O00244 68 aa9.01□□□□□ -0.97
GPC3-201ENST00000370818 TRGV4A0A0C4DH28 118 aa9.01□□□□□ -0.97
GPC3-201ENST00000370818 FLNBO75369 2602 aaKnown RBP9.01□□□□□ -0.97
GPC3-201ENST00000370818 OXTP01178 125 aa9.01□□□□□ -0.97
GPC3-201ENST00000370818 LINC00612Q8N6U2 182 aa9.01□□□□□ -0.97
GPC3-201ENST00000370818 C22orf24Q9Y442 160 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms