RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 DEFB4AO15263 64 aa10.63□□□□□ -0.71
LMO4-201ENST00000370542 LINC01620Q4KN68 170 aa10.63□□□□□ -0.71
LMO4-201ENST00000370542 ZFAND2AQ8N6M9 145 aa10.63□□□□□ -0.71
LMO4-201ENST00000370542 C14orf178Q8N769 122 aaPredicted RBP10.63□□□□□ -0.71
LMO4-201ENST00000370542 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
LMO4-201ENST00000370542 FAM19A4Q96LR4 140 aa10.63□□□□□ -0.71
LMO4-201ENST00000370542 APLNQ9ULZ1 77 aa10.63□□□□□ -0.71
LMO4-201ENST00000370542 IGHV4-28A0A0C4DH34 117 aa10.62□□□□□ -0.71
LMO4-201ENST00000370542 COX6CP09669 75 aa10.62□□□□□ -0.71
LMO4-201ENST00000370542 PRB4P10163 310 aaPredicted RBP10.62□□□□□ -0.71
LMO4-201ENST00000370542 TMEM170BQ5T4T1 132 aa10.62□□□□□ -0.71
LMO4-201ENST00000370542 PTH2Q96A98 100 aa10.62□□□□□ -0.71
LMO4-201ENST00000370542 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
LMO4-201ENST00000370542 SPANXCQ9NY87 97 aa10.62□□□□□ -0.71
LMO4-201ENST00000370542 MDFICQ9P1T7 246 aa10.62□□□□□ -0.71
LMO4-201ENST00000370542 HERC1Q15751 4861 aa10.61□□□□□ -0.71
LMO4-201ENST00000370542 TRBV27A0A0K0K1C4 114 aa10.61□□□□□ -0.71
LMO4-201ENST00000370542 DUSP14O95147 198 aaKnown RBP10.61□□□□□ -0.71
LMO4-201ENST00000370542 TMEM223A0PJW6 202 aa10.6□□□□□ -0.71
LMO4-201ENST00000370542 H3BMM0 161 aa10.6□□□□□ -0.71
LMO4-201ENST00000370542 ACYP1P07311 99 aa10.6□□□□□ -0.71
LMO4-201ENST00000370542 ANXA2RQ3ZCQ2 193 aa10.6□□□□□ -0.71
LMO4-201ENST00000370542 UBE2WQ96B02 151 aa10.6□□□□□ -0.71
LMO4-201ENST00000370542 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
LMO4-201ENST00000370542 KIF25-AS1Q9Y6Z4 181 aa10.6□□□□□ -0.71
LMO4-201ENST00000370542 A4D1N5 150 aa10.59□□□□□ -0.71
LMO4-201ENST00000370542 SNRPD3P62318 126 aaKnown RBP10.59□□□□□ -0.71
LMO4-201ENST00000370542 AMELXQ99217 191 aa10.59□□□□□ -0.71
LMO4-201ENST00000370542 IMUPQ9GZP8 106 aa10.59□□□□□ -0.71
LMO4-201ENST00000370542 PKHD1P08F94 4074 aa10.59□□□□□ -0.71
LMO4-201ENST00000370542 TSHBP01222 138 aa10.58□□□□□ -0.72
LMO4-201ENST00000370542 Q6ZTC4 211 aa10.58□□□□□ -0.72
LMO4-201ENST00000370542 ODF3Q96PU9 254 aa10.58□□□□□ -0.72
LMO4-201ENST00000370542 TRAV10A0A0B4J240 114 aa10.57□□□□□ -0.72
LMO4-201ENST00000370542 SOCS3O14543 225 aa10.57□□□□□ -0.72
LMO4-201ENST00000370542 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
LMO4-201ENST00000370542 Q1RN00 199 aa10.57□□□□□ -0.72
LMO4-201ENST00000370542 PRR9Q5T870 116 aa10.57□□□□□ -0.72
LMO4-201ENST00000370542 NTN5Q8WTR8 489 aaPredicted RBP10.57□□□□□ -0.72
LMO4-201ENST00000370542 SS18L2Q9UHA2 77 aa10.57□□□□□ -0.72
LMO4-201ENST00000370542 B5MCH6 92 aa10.56□□□□□ -0.72
LMO4-201ENST00000370542 RNASE4P34096 147 aaKnown RBP10.56□□□□□ -0.72
LMO4-201ENST00000370542 ID1P41134 155 aa10.56□□□□□ -0.72
LMO4-201ENST00000370542 LINC00315P59091 139 aa10.56□□□□□ -0.72
LMO4-201ENST00000370542 FAM159AQ6UWV7 190 aa10.56□□□□□ -0.72
LMO4-201ENST00000370542 CELA1Q9UNI1 258 aa10.56□□□□□ -0.72
LMO4-201ENST00000370542 MUC4Q99102 2169 aa10.55□□□□□ -0.72
LMO4-201ENST00000370542 DYNC1H1Q14204 4646 aaKnown RBP10.55□□□□□ -0.72
LMO4-201ENST00000370542 SUMO4Q6EEV6 95 aa10.55□□□□□ -0.72
LMO4-201ENST00000370542 CFAP161Q6P656 301 aa10.55□□□□□ -0.72
LMO4-201ENST00000370542 KLLNB2CW77 178 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 TIMM17BO60830 172 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 ATP5G1P05496 136 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 SFTA2Q6UW10 78 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 C2orf82Q6UX34 121 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 MUSTN1Q8IVN3 82 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 C15orf53Q8NAA6 179 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 ZNRF2Q8NHG8 242 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 COPS9Q8WXC6 57 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 XCL2Q9UBD3 114 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 PYGO1Q9Y3Y4 419 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 DNAH11Q96DT5 4516 aa10.54□□□□□ -0.72
LMO4-201ENST00000370542 A0A0J9YXY3 114 aa10.53□□□□□ -0.72
LMO4-201ENST00000370542 TRBV7-7A0A0K0K1E9 115 aa10.53□□□□□ -0.72
LMO4-201ENST00000370542 SMIM9A6NGZ8 99 aa10.53□□□□□ -0.72
LMO4-201ENST00000370542 A8MTW9 85 aa10.53□□□□□ -0.72
LMO4-201ENST00000370542 C20orf173Q96LM9 149 aa10.53□□□□□ -0.72
LMO4-201ENST00000370542 PKD1P98161 4303 aa10.52□□□□□ -0.73
LMO4-201ENST00000370542 DEFB131BA0A096LNP1 70 aa10.51□□□□□ -0.73
LMO4-201ENST00000370542 TRAV4A0A0B4J268 109 aa10.51□□□□□ -0.73
LMO4-201ENST00000370542 F5H697 171 aa10.51□□□□□ -0.73
LMO4-201ENST00000370542 I3L3M4 83 aa10.51□□□□□ -0.73
LMO4-201ENST00000370542 ZNF22P17026 224 aaPredicted RBP10.51□□□□□ -0.73
LMO4-201ENST00000370542 DEFB1P60022 68 aa10.51□□□□□ -0.73
LMO4-201ENST00000370542 TMEM101Q96IK0 257 aa10.51□□□□□ -0.73
LMO4-201ENST00000370542 GNRH2O43555 120 aa10.5□□□□□ -0.73
LMO4-201ENST00000370542 C20orf203Q8NBC4 194 aa10.5□□□□□ -0.73
LMO4-201ENST00000370542 C9orf85Q96MD7 179 aa10.5□□□□□ -0.73
LMO4-201ENST00000370542 ICOSQ9Y6W8 199 aa10.5□□□□□ -0.73
LMO4-201ENST00000370542 TIMM21Q9BVV7 248 aa10.49□□□□□ -0.73
LMO4-201ENST00000370542 LST1O00453 97 aa10.48□□□□□ -0.73
LMO4-201ENST00000370542 SPART-AS1P0CW21 52 aa10.48□□□□□ -0.73
LMO4-201ENST00000370542 MIAQ16674 131 aa10.48□□□□□ -0.73
LMO4-201ENST00000370542 C1orf158Q8N1D5 194 aa10.48□□□□□ -0.73
LMO4-201ENST00000370542 A0A1B0GVY2 172 aa10.47□□□□□ -0.73
LMO4-201ENST00000370542 M0QY20 66 aa10.47□□□□□ -0.73
LMO4-201ENST00000370542 TRIAP1O43715 76 aa10.47□□□□□ -0.73
LMO4-201ENST00000370542 RPL39P62891 51 aaKnown RBP10.47□□□□□ -0.73
LMO4-201ENST00000370542 MRPS36P82909 103 aaKnown RBP10.47□□□□□ -0.73
LMO4-201ENST00000370542 LINC00336Q6ZUF6 198 aa10.47□□□□□ -0.73
LMO4-201ENST00000370542 PPDPFQ9H3Y8 114 aa10.47□□□□□ -0.73
LMO4-201ENST00000370542 TRGV11A0A075B6L2 103 aa10.46□□□□□ -0.73
LMO4-201ENST00000370542 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.73
LMO4-201ENST00000370542 F6UB75 175 aa10.46□□□□□ -0.73
LMO4-201ENST00000370542 EMP1P54849 157 aa10.46□□□□□ -0.73
LMO4-201ENST00000370542 Q6ZQT7 251 aa10.46□□□□□ -0.73
LMO4-201ENST00000370542 IGLV4-3A0A075B6K6 122 aa10.45□□□□□ -0.74
LMO4-201ENST00000370542 TINCRA0A1B0GVN0 87 aa10.45□□□□□ -0.74
LMO4-201ENST00000370542 CCDC179H3BU77 68 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms