RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 C11orf72Q8NBR9 251 aa3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 IBA57-AS1B1ANH7 110 aa3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 CHCHD7Q9BUK0 85 aa3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 CDC42SE2Q9NRR3 84 aa3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 SPANXCQ9NY87 97 aa3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 PKIGQ9Y2B9 76 aa3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 CFAP54Q96N23 3096 aa3.83□□□□□ -1.8
SMNDC1-202ENST00000369603 IGLV4-69A0A075B6H9 119 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 BAALC-AS2P0C853 105 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 IGHV4-30-4P0DP06 118 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 AMELXQ99217 191 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 WDFY4Q6ZS81 3184 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 ACYP1P07311 99 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 CHCHD10Q8WYQ3 142 aaPredicted RBP3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 SPANXDQ9BXN6 97 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 LAMA1P25391 3075 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 LELP1Q5T871 98 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 Q9HAA7 133 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 AKAP13Q12802 2813 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 XIRP2A4UGR9 3374 aa3.82□□□□□ -1.8
SMNDC1-202ENST00000369603 DEFB131BA0A096LNP1 70 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 LOC100131303A0A0U1RQF7 123 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 CCDC179H3BU77 68 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 TRIAP1O43715 76 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 RBMY1FQ15415 496 aaKnown RBP3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 LINC00308Q8TCZ7 52 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 TMEM126AQ9H061 195 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 A8MTW9 85 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 H3BQ85 93 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 FHL2Q14192 279 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 CD164L2Q6UWJ8 174 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 CDIP1Q9H305 208 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 ORMDL1Q9P0S3 153 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 LINC00959A0A1B0GUT2 108 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 LINC00242Q5T6M2 205 aa3.81□□□□□ -1.8
SMNDC1-202ENST00000369603 VPS13AQ96RL7 3174 aa3.8□□□□□ -1.8
SMNDC1-202ENST00000369603 TRBV30A0A0K0K1B3 111 aa3.8□□□□□ -1.8
SMNDC1-202ENST00000369603 TRACP01848 142 aa3.8□□□□□ -1.8
SMNDC1-202ENST00000369603 Q6ZSN1 163 aa3.8□□□□□ -1.8
SMNDC1-202ENST00000369603 TRAV10A0A0B4J240 114 aa3.8□□□□□ -1.8
SMNDC1-202ENST00000369603 OXLD1Q5BKU9 147 aa3.8□□□□□ -1.8
SMNDC1-202ENST00000369603 IL17DQ8TAD2 202 aa3.8□□□□□ -1.8
SMNDC1-202ENST00000369603 PRO0461Q9UI25 63 aa3.8□□□□□ -1.8
SMNDC1-202ENST00000369603 F8WEM9 126 aa3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 MUC7Q8TAX7 377 aa3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 KLK5Q9Y337 293 aaPredicted RBP3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 SMCPP49901 116 aaPredicted RBP3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 TSPEAR-AS2P59090 65 aa3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 KPRPQ5T749 579 aaPredicted RBP3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 REV3LO60673 3130 aa3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 KRTAP1-3Q8IUG1 177 aa3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 IGKV3D-7A0A0C4DH55 119 aa3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 A0A1B0GUV1 79 aa3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 LINC00643Q86TS7 51 aa3.79□□□□□ -1.8
SMNDC1-202ENST00000369603 A8MZ25 164 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 Q8IZM0 81 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 DNAH14Q0VDD8 3507 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 ATOX1O00244 68 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 LINC00694P0DN24 101 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 A0A087WZ39 114 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 A0A1B0GX51 115 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 J3KT08 172 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 DSCR8Q96T75 97 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 UBL5Q9BZL1 73 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 MUC4Q99102 2169 aa3.78□□□□□ -1.8
SMNDC1-202ENST00000369603 RPL18AQ02543 176 aaKnown RBP3.77□□□□□ -1.81
SMNDC1-202ENST00000369603 COX17Q14061 63 aa3.77□□□□□ -1.81
SMNDC1-202ENST00000369603 JMJD7-PLA2G4BH0Y9G9 81 aa3.77□□□□□ -1.81
SMNDC1-202ENST00000369603 LECT2O14960 151 aa3.77□□□□□ -1.81
SMNDC1-202ENST00000369603 Q6Q795 121 aa3.77□□□□□ -1.81
SMNDC1-202ENST00000369603 DIRC1Q969H9 104 aa3.77□□□□□ -1.81
SMNDC1-202ENST00000369603 LST1O00453 97 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 C14orf177Q52M58 125 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 LINC01561Q8N1V8 128 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 NCR3O14931 201 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 UQCRQO14949 82 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 USP24Q9UPU5 2620 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 IGLV4-60A0A075B6I1 120 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 ETDCA0A1B0GVM5 59 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 F8P00451 2351 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 COX6A2Q02221 97 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 HIGD2BQ4VC39 106 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 VCANP13611 3396 aa3.76□□□□□ -1.81
SMNDC1-202ENST00000369603 HECTD1Q9ULT8 2610 aa3.75□□□□□ -1.81
SMNDC1-202ENST00000369603 FLNAP21333 2647 aaKnown RBP3.75□□□□□ -1.81
SMNDC1-202ENST00000369603 A0A0J9YWU9 116 aa3.75□□□□□ -1.81
SMNDC1-202ENST00000369603 C3orf22Q8N5N4 141 aa3.75□□□□□ -1.81
SMNDC1-202ENST00000369603 DSPP15924 2871 aaKnown RBP3.75□□□□□ -1.81
SMNDC1-202ENST00000369603 WFDC9Q8NEX5 89 aa3.75□□□□□ -1.81
SMNDC1-202ENST00000369603 HAMPP81172 84 aa3.75□□□□□ -1.81
SMNDC1-202ENST00000369603 C14orf132Q9NPU4 83 aa3.75□□□□□ -1.81
SMNDC1-202ENST00000369603 IGLV5-45A0A087WSX0 123 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 IGLV5-39A0A0G2JS06 123 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 KRTAP1-1Q07627 177 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 SYCNQ0VAF6 134 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 SDIM1Q6ZPB5 146 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 NTM-AS1Q6ZSK4 140 aa3.74□□□□□ -1.81
SMNDC1-202ENST00000369603 X6R8D5 127 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms