RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 LINC00336Q6ZUF6 198 aa13.32□□□□□ -0.28
PRDM1-202ENST00000369091 ABCA2Q9BZC7 2435 aa13.32□□□□□ -0.28
PRDM1-202ENST00000369091 FAM236DA0A1B0GTK5 79 aa13.32□□□□□ -0.28
PRDM1-202ENST00000369091 FAM236CP0DP71 79 aa13.32□□□□□ -0.28
PRDM1-202ENST00000369091 NDUFC2O95298 119 aa13.31□□□□□ -0.28
PRDM1-202ENST00000369091 ITPR1Q14643 2758 aa13.31□□□□□ -0.28
PRDM1-202ENST00000369091 LINC00158P58513 81 aa13.31□□□□□ -0.28
PRDM1-202ENST00000369091 CCKP06307 115 aa13.3□□□□□ -0.28
PRDM1-202ENST00000369091 CCL18P55774 89 aa13.3□□□□□ -0.28
PRDM1-202ENST00000369091 H0YGX0 51 aa13.29□□□□□ -0.28
PRDM1-202ENST00000369091 FAM19A3Q7Z5A8 133 aa13.29□□□□□ -0.28
PRDM1-202ENST00000369091 CRYBG3Q68DQ2 2970 aa13.29□□□□□ -0.28
PRDM1-202ENST00000369091 A6NDX4 124 aa13.29□□□□□ -0.28
PRDM1-202ENST00000369091 NTM-AS1Q6ZSK4 140 aa13.29□□□□□ -0.28
PRDM1-202ENST00000369091 ZFYVE26Q68DK2 2539 aa13.29□□□□□ -0.28
PRDM1-202ENST00000369091 XCL1P47992 114 aa13.28□□□□□ -0.28
PRDM1-202ENST00000369091 DEFB131AP59861 70 aa13.28□□□□□ -0.28
PRDM1-202ENST00000369091 XCL2Q9UBD3 114 aa13.28□□□□□ -0.28
PRDM1-202ENST00000369091 NDUFC2-KCTD14E9PQ53 114 aa13.28□□□□□ -0.28
PRDM1-202ENST00000369091 ADORA2A-AS1P86434 159 aa13.27□□□□□ -0.28
PRDM1-202ENST00000369091 C11orf72Q8NBR9 251 aa13.27□□□□□ -0.29
PRDM1-202ENST00000369091 COX7B2Q8TF08 81 aa13.27□□□□□ -0.29
PRDM1-202ENST00000369091 CDC42SE2Q9NRR3 84 aa13.27□□□□□ -0.29
PRDM1-202ENST00000369091 ORMDL1Q9P0S3 153 aa13.27□□□□□ -0.29
PRDM1-202ENST00000369091 IGKV3OR2-268A0A0C4DH90 116 aa13.26□□□□□ -0.29
PRDM1-202ENST00000369091 CREBBPQ92793 2442 aa13.26□□□□□ -0.29
PRDM1-202ENST00000369091 USP24Q9UPU5 2620 aa13.26□□□□□ -0.29
PRDM1-202ENST00000369091 UCNP55089 124 aa13.26□□□□□ -0.29
PRDM1-202ENST00000369091 PKD1L2Q7Z442 2459 aa13.25□□□□□ -0.29
PRDM1-202ENST00000369091 PAX4O43316 350 aa13.25□□□□□ -0.29
PRDM1-202ENST00000369091 PRO0628Q9UI54 55 aa13.24□□□□□ -0.29
PRDM1-202ENST00000369091 H7BZZ5 65 aa13.24□□□□□ -0.29
PRDM1-202ENST00000369091 PSMB8P28062 276 aa13.24□□□□□ -0.29
PRDM1-202ENST00000369091 J3QLI3 93 aa13.23□□□□□ -0.29
PRDM1-202ENST00000369091 C1orf43Q9BWL3 253 aa13.23□□□□□ -0.29
PRDM1-202ENST00000369091 SERP1Q9Y6X1 66 aa13.22□□□□□ -0.29
PRDM1-202ENST00000369091 ATRXP46100 2492 aa13.21□□□□□ -0.29
PRDM1-202ENST00000369091 EPM2AB3EWF7 344 aa13.21□□□□□ -0.29
PRDM1-202ENST00000369091 C2CD3Q4AC94 2353 aa13.21□□□□□ -0.29
PRDM1-202ENST00000369091 PKIGQ9Y2B9 76 aa13.21□□□□□ -0.3
PRDM1-202ENST00000369091 CSMD2Q7Z408 3487 aa13.21□□□□□ -0.3
PRDM1-202ENST00000369091 S100A7L2Q5SY68 101 aa13.2□□□□□ -0.3
PRDM1-202ENST00000369091 ATP5EP2Q5VTU8 51 aa13.2□□□□□ -0.3
PRDM1-202ENST00000369091 C11orf68Q9H3H3 251 aaKnown RBP13.2□□□□□ -0.3
PRDM1-202ENST00000369091 SNURFQ9Y675 71 aa13.2□□□□□ -0.3
PRDM1-202ENST00000369091 RNASE1P07998 156 aaKnown RBP13.19□□□□□ -0.3
PRDM1-202ENST00000369091 WFDC11Q8NEX6 87 aa13.19□□□□□ -0.3
PRDM1-202ENST00000369091 MAP1AP78559 2803 aaPredicted RBP13.19□□□□□ -0.3
PRDM1-202ENST00000369091 TMEM89A2RUT3 159 aa13.19□□□□□ -0.3
PRDM1-202ENST00000369091 RPL35AP18077 110 aaKnown RBP13.19□□□□□ -0.3
PRDM1-202ENST00000369091 LYPD5Q6UWN5 251 aa13.19□□□□□ -0.3
PRDM1-202ENST00000369091 Q6ZTI0 123 aa13.19□□□□□ -0.3
PRDM1-202ENST00000369091 TRGV1A0A0A0MS02 117 aa13.18□□□□□ -0.3
PRDM1-202ENST00000369091 CUBNO60494 3623 aa13.17□□□□□ -0.3
PRDM1-202ENST00000369091 FP248Q71RG6 208 aaPredicted RBP13.17□□□□□ -0.3
PRDM1-202ENST00000369091 RMI2Q96E14 147 aa13.17□□□□□ -0.3
PRDM1-202ENST00000369091 C16orf95Q9H693 158 aa13.17□□□□□ -0.3
PRDM1-202ENST00000369091 UBE2L6O14933 153 aa13.16□□□□□ -0.3
PRDM1-202ENST00000369091 AVPP01185 164 aa13.16□□□□□ -0.3
PRDM1-202ENST00000369091 IGHV4-61A0A0C4DH41 118 aa13.15□□□□□ -0.3
PRDM1-202ENST00000369091 UBL5Q9BZL1 73 aa13.15□□□□□ -0.3
PRDM1-202ENST00000369091 TRBV6-4A0A1B0GX49 114 aa13.14□□□□□ -0.31
PRDM1-202ENST00000369091 K7EQD1 137 aa13.14□□□□□ -0.31
PRDM1-202ENST00000369091 PRR3P79522 188 aaKnown RBP13.14□□□□□ -0.31
PRDM1-202ENST00000369091 TRAV10A0A0B4J240 114 aa13.14□□□□□ -0.31
PRDM1-202ENST00000369091 CHD6Q8TD26 2715 aa13.14□□□□□ -0.31
PRDM1-202ENST00000369091 JMJD7-PLA2G4BH0Y9G9 81 aa13.13□□□□□ -0.31
PRDM1-202ENST00000369091 DEFB136Q30KP8 78 aa13.13□□□□□ -0.31
PRDM1-202ENST00000369091 A0A096LNT2 108 aa13.12□□□□□ -0.31
PRDM1-202ENST00000369091 A8MTW9 85 aa13.12□□□□□ -0.31
PRDM1-202ENST00000369091 LY6G6DO95868 133 aa13.12□□□□□ -0.31
PRDM1-202ENST00000369091 LINC00474Q9P2X8 69 aa13.12□□□□□ -0.31
PRDM1-202ENST00000369091 TRAV7A0A075B6U4 112 aa13.12□□□□□ -0.31
PRDM1-202ENST00000369091 IBA57-AS1B1ANH7 110 aa13.12□□□□□ -0.31
PRDM1-202ENST00000369091 Q8N814 137 aa13.12□□□□□ -0.31
PRDM1-202ENST00000369091 F8WEM9 126 aa13.11□□□□□ -0.31
PRDM1-202ENST00000369091 SLURP1P55000 103 aa13.11□□□□□ -0.31
PRDM1-202ENST00000369091 LINC00167Q96N53 147 aa13.11□□□□□ -0.31
PRDM1-202ENST00000369091 LOC100131303A0A0U1RQF7 123 aa13.1□□□□□ -0.31
PRDM1-202ENST00000369091 M0R2N4 97 aa13.1□□□□□ -0.31
PRDM1-202ENST00000369091 INSP01308 110 aa13.1□□□□□ -0.31
PRDM1-202ENST00000369091 UBE2E2Q96LR5 201 aa13.1□□□□□ -0.31
PRDM1-202ENST00000369091 IGSF10Q6WRI0 2623 aa13.1□□□□□ -0.31
PRDM1-202ENST00000369091 IGHV4-59P01825 116 aa13.1□□□□□ -0.31
PRDM1-202ENST00000369091 IGLV4-60A0A075B6I1 120 aa13.09□□□□□ -0.31
PRDM1-202ENST00000369091 NANOS2P60321 138 aaKnown RBP13.09□□□□□ -0.31
PRDM1-202ENST00000369091 C18orf65Q6ZTR6 163 aa13.09□□□□□ -0.31
PRDM1-202ENST00000369091 TRBV10-3A0A0K0K1G6 114 aa13.09□□□□□ -0.31
PRDM1-202ENST00000369091 TMEM86BQ8N661 226 aa13.09□□□□□ -0.31
PRDM1-202ENST00000369091 CSPG4Q6UVK1 2322 aa13.08□□□□□ -0.31
PRDM1-202ENST00000369091 MAP6D1Q9H9H5 199 aa13.08□□□□□ -0.32
PRDM1-202ENST00000369091 TMEM256-PLSCR3K7ERE1 68 aa13.07□□□□□ -0.32
PRDM1-202ENST00000369091 KLKP1Q107X0 134 aa13.07□□□□□ -0.32
PRDM1-202ENST00000369091 SMIM26A0A096LP01 95 aa13.07□□□□□ -0.32
PRDM1-202ENST00000369091 IGHV3OR16-9A0A0B4J2B5 98 aa13.07□□□□□ -0.32
PRDM1-202ENST00000369091 HAMPP81172 84 aa13.06□□□□□ -0.32
PRDM1-202ENST00000369091 CFAP46Q8IYW2 2715 aa13.06□□□□□ -0.32
PRDM1-202ENST00000369091 TRBV10-1A0A0K0K1A3 114 aa13.05□□□□□ -0.32
PRDM1-202ENST00000369091 A0A0U1RQV1 116 aa13.05□□□□□ -0.32
PRDM1-202ENST00000369091 LINC01547P58512 204 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms