RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 APLNQ9ULZ1 77 aa10.89□□□□□ -0.67
LMNA-203ENST00000368297 IGLV4-60A0A075B6I1 120 aa10.89□□□□□ -0.67
LMNA-203ENST00000368297 J3QQQ9 107 aa10.89□□□□□ -0.67
LMNA-203ENST00000368297 HERVK_113P63121 156 aa10.89□□□□□ -0.67
LMNA-203ENST00000368297 WFDC10BQ8IUB3 73 aa10.89□□□□□ -0.67
LMNA-203ENST00000368297 A0A1B0GUV1 79 aa10.88□□□□□ -0.67
LMNA-203ENST00000368297 SCGB1D4Q6XE38 83 aa10.88□□□□□ -0.67
LMNA-203ENST00000368297 FAM19A3Q7Z5A8 133 aa10.88□□□□□ -0.67
LMNA-203ENST00000368297 A6NDN8 102 aa10.87□□□□□ -0.67
LMNA-203ENST00000368297 WWC2-AS2Q96NR7 200 aa10.87□□□□□ -0.67
LMNA-203ENST00000368297 LINC00588Q9Y4M8 146 aa10.87□□□□□ -0.67
LMNA-203ENST00000368297 COX11Q9Y6N1 276 aa10.87□□□□□ -0.67
LMNA-203ENST00000368297 IGHV3-30P01768 117 aa10.86□□□□□ -0.67
LMNA-203ENST00000368297 IGHV3-33P01772 117 aa10.86□□□□□ -0.67
LMNA-203ENST00000368297 IGHV3-30-3P0DP02 117 aa10.86□□□□□ -0.67
LMNA-203ENST00000368297 IGHV3-30-5P0DP03 117 aa10.86□□□□□ -0.67
LMNA-203ENST00000368297 Q8N3U1 123 aa10.86□□□□□ -0.67
LMNA-203ENST00000368297 MUC7Q8TAX7 377 aa10.86□□□□□ -0.67
LMNA-203ENST00000368297 IGKV3OR2-268A0A0C4DH90 116 aa10.85□□□□□ -0.67
LMNA-203ENST00000368297 ANGP03950 147 aaKnown RBP10.85□□□□□ -0.67
LMNA-203ENST00000368297 UBE2DNLQ8IWF7 75 aa10.85□□□□□ -0.67
LMNA-203ENST00000368297 IGLV5-45A0A087WSX0 123 aa10.85□□□□□ -0.67
LMNA-203ENST00000368297 TRAV13-1A0A0B4J241 112 aa10.85□□□□□ -0.67
LMNA-203ENST00000368297 IGHV1-58A0A0C4DH39 117 aa10.85□□□□□ -0.67
LMNA-203ENST00000368297 HIST1H4GQ99525 98 aa10.85□□□□□ -0.67
LMNA-203ENST00000368297 GCSHP23434 173 aa10.84□□□□□ -0.67
LMNA-203ENST00000368297 LINC00242Q5T6M2 205 aa10.84□□□□□ -0.67
LMNA-203ENST00000368297 IGHV3-64A0A075B6Q5 118 aa10.83□□□□□ -0.68
LMNA-203ENST00000368297 CLPSL2Q6UWE3 100 aa10.83□□□□□ -0.68
LMNA-203ENST00000368297 CEND1Q8N111 149 aa10.83□□□□□ -0.68
LMNA-203ENST00000368297 PTTG1IPP53801 180 aa10.82□□□□□ -0.68
LMNA-203ENST00000368297 TSPEAR-AS2P59090 65 aa10.82□□□□□ -0.68
LMNA-203ENST00000368297 LINC00269Q8N2A0 174 aa10.82□□□□□ -0.68
LMNA-203ENST00000368297 TM2D2Q9BX73 214 aa10.82□□□□□ -0.68
LMNA-203ENST00000368297 CDKN2A-AS1Q9UH64 79 aa10.82□□□□□ -0.68
LMNA-203ENST00000368297 KLK12Q9UKR0 248 aa10.82□□□□□ -0.68
LMNA-203ENST00000368297 SPINK8P0C7L1 97 aa10.81□□□□□ -0.68
LMNA-203ENST00000368297 SRSF9Q13242 221 aaKnown RBP eCLIP10.81□□□□□ -0.68
LMNA-203ENST00000368297 TRAV8-3A0A0A6YYJ7 113 aa10.8□□□□□ -0.68
LMNA-203ENST00000368297 COX6A2Q02221 97 aa10.8□□□□□ -0.68
LMNA-203ENST00000368297 UBE2V1Q13404 147 aa10.8□□□□□ -0.68
LMNA-203ENST00000368297 LINC01556Q5JQF7 62 aa10.8□□□□□ -0.68
LMNA-203ENST00000368297 UPK3BQ9BT76 320 aa10.8□□□□□ -0.68
LMNA-203ENST00000368297 REG3AQ06141 175 aa10.79□□□□□ -0.68
LMNA-203ENST00000368297 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
LMNA-203ENST00000368297 CRPP02741 224 aa10.79□□□□□ -0.68
LMNA-203ENST00000368297 DNAH10OSP0CZ25 163 aa10.79□□□□□ -0.68
LMNA-203ENST00000368297 SS18Q15532 418 aa10.79□□□□□ -0.68
LMNA-203ENST00000368297 SPANXB1Q9NS25 103 aaPredicted RBP10.79□□□□□ -0.68
LMNA-203ENST00000368297 TGP01266 2768 aa10.78□□□□□ -0.68
LMNA-203ENST00000368297 CCL25O15444 150 aa10.78□□□□□ -0.68
LMNA-203ENST00000368297 SMIM13P0DJ93 91 aa10.78□□□□□ -0.68
LMNA-203ENST00000368297 NDUFA12Q9UI09 145 aa10.78□□□□□ -0.68
LMNA-203ENST00000368297 TMEM238LA0A1B0GVL6 79 aa10.77□□□□□ -0.69
LMNA-203ENST00000368297 A6NJY4 79 aa10.77□□□□□ -0.69
LMNA-203ENST00000368297 TAX1BP3O14907 124 aa10.77□□□□□ -0.69
LMNA-203ENST00000368297 UBE2WQ96B02 151 aa10.77□□□□□ -0.69
LMNA-203ENST00000368297 Q9H8V8 135 aa10.77□□□□□ -0.69
LMNA-203ENST00000368297 DYNC2H1Q8NCM8 4307 aaKnown RBP10.76□□□□□ -0.69
LMNA-203ENST00000368297 IGLV5-39A0A0G2JS06 123 aa10.76□□□□□ -0.69
LMNA-203ENST00000368297 TMEM238C9JI98 176 aa10.76□□□□□ -0.69
LMNA-203ENST00000368297 FXYD2P54710 66 aa10.76□□□□□ -0.69
LMNA-203ENST00000368297 DNAH7Q8WXX0 4024 aa10.76□□□□□ -0.69
LMNA-203ENST00000368297 IGLV10-54A0A075B6I4 117 aa10.75□□□□□ -0.69
LMNA-203ENST00000368297 ENHOQ6UWT2 76 aa10.75□□□□□ -0.69
LMNA-203ENST00000368297 PRR34Q9NV39 138 aa10.75□□□□□ -0.69
LMNA-203ENST00000368297 A0A0J9YXY3 114 aa10.74□□□□□ -0.69
LMNA-203ENST00000368297 SMIM1B2RUZ4 78 aa10.74□□□□□ -0.69
LMNA-203ENST00000368297 XCL1P47992 114 aa10.74□□□□□ -0.69
LMNA-203ENST00000368297 Q6ZVH6 145 aa10.74□□□□□ -0.69
LMNA-203ENST00000368297 C3orf84H3BNL1 204 aa10.73□□□□□ -0.69
LMNA-203ENST00000368297 NDUFA1O15239 70 aa10.73□□□□□ -0.69
LMNA-203ENST00000368297 C10orf126Q8N4M7 172 aa10.73□□□□□ -0.69
LMNA-203ENST00000368297 CHCHD10Q8WYQ3 142 aaPredicted RBP10.73□□□□□ -0.69
LMNA-203ENST00000368297 NHP2Q9NX24 153 aaKnown RBP10.73□□□□□ -0.69
LMNA-203ENST00000368297 CASC10Q5T4H9 136 aa10.73□□□□□ -0.69
LMNA-203ENST00000368297 C9orf118A6NHY6 69 aa10.72□□□□□ -0.69
LMNA-203ENST00000368297 K7EP13 123 aa10.72□□□□□ -0.69
LMNA-203ENST00000368297 CIRBPQ14011 172 aaKnown RBP10.72□□□□□ -0.69
LMNA-203ENST00000368297 VAMP3Q15836 100 aa10.72□□□□□ -0.69
LMNA-203ENST00000368297 MIAQ16674 131 aa10.72□□□□□ -0.69
LMNA-203ENST00000368297 CSMD3Q7Z407 3707 aa10.71□□□□□ -0.69
LMNA-203ENST00000368297 TRAV8-4A0A0B4J246 113 aa10.71□□□□□ -0.69
LMNA-203ENST00000368297 IGHV3OR16-9A0A0B4J2B5 98 aa10.71□□□□□ -0.69
LMNA-203ENST00000368297 A0A087WZ39 114 aa10.7□□□□□ -0.7
LMNA-203ENST00000368297 IBA57-AS1B1ANH7 110 aa10.7□□□□□ -0.7
LMNA-203ENST00000368297 TIMM17BO60830 172 aa10.7□□□□□ -0.7
LMNA-203ENST00000368297 RAB37Q96AX2 223 aa10.7□□□□□ -0.7
LMNA-203ENST00000368297 Q9HAA7 133 aa10.7□□□□□ -0.7
LMNA-203ENST00000368297 GAGE12HA6NDE8 117 aa10.69□□□□□ -0.7
LMNA-203ENST00000368297 HERV-K104P63124 156 aa10.69□□□□□ -0.7
LMNA-203ENST00000368297 RPL24P83731 157 aaKnown RBP10.69□□□□□ -0.7
LMNA-203ENST00000368297 CD164L2Q6UWJ8 174 aa10.69□□□□□ -0.7
LMNA-203ENST00000368297 C5orf38Q86SI9 138 aa10.69□□□□□ -0.7
LMNA-203ENST00000368297 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
LMNA-203ENST00000368297 C1orf43Q9BWL3 253 aa10.69□□□□□ -0.7
LMNA-203ENST00000368297 A0A1B0GWB2 263 aa10.68□□□□□ -0.7
LMNA-203ENST00000368297 COX7B2Q8TF08 81 aa10.68□□□□□ -0.7
LMNA-203ENST00000368297 CBY1Q9Y3M2 126 aa10.68□□□□□ -0.7
LMNA-203ENST00000368297 STARD9Q9P2P6 4700 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms