RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 CASC2Q6XLA1 102 aa9.36□□□□□ -0.91
PTPRK-207ENST00000368226 SMIM20Q8N5G0 67 aa9.36□□□□□ -0.91
PTPRK-207ENST00000368226 WDR87Q6ZQQ6 2873 aa9.36□□□□□ -0.91
PTPRK-207ENST00000368226 Q6ZQY7 126 aa9.35□□□□□ -0.91
PTPRK-207ENST00000368226 Q6ZTC4 211 aa9.35□□□□□ -0.91
PTPRK-207ENST00000368226 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
PTPRK-207ENST00000368226 UBE2D3P61077 147 aa9.34□□□□□ -0.91
PTPRK-207ENST00000368226 UBE2D2P62837 147 aa9.34□□□□□ -0.91
PTPRK-207ENST00000368226 ATG2AQ2TAZ0 1938 aa9.34□□□□□ -0.91
PTPRK-207ENST00000368226 MT-ATP8P03928 68 aa9.34□□□□□ -0.91
PTPRK-207ENST00000368226 PDE6GP18545 87 aa9.34□□□□□ -0.91
PTPRK-207ENST00000368226 PYGO1Q9Y3Y4 419 aa9.34□□□□□ -0.91
PTPRK-207ENST00000368226 NAV3Q8IVL0 2385 aa9.34□□□□□ -0.91
PTPRK-207ENST00000368226 LOC107984640A0A0U1RRK4 108 aa9.33□□□□□ -0.92
PTPRK-207ENST00000368226 CYSRT1A8MQ03 144 aa9.33□□□□□ -0.92
PTPRK-207ENST00000368226 SMIM11BQ8TCY0 68 aa9.33□□□□□ -0.92
PTPRK-207ENST00000368226 WFDC13Q8IUB5 93 aa9.33□□□□□ -0.92
PTPRK-207ENST00000368226 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
PTPRK-207ENST00000368226 POM121L12Q8N7R1 296 aa9.32□□□□□ -0.92
PTPRK-207ENST00000368226 EXPH5Q8NEV8 1989 aa9.32□□□□□ -0.92
PTPRK-207ENST00000368226 SEC61GP60059 68 aa9.32□□□□□ -0.92
PTPRK-207ENST00000368226 M0R378 163 aa9.32□□□□□ -0.92
PTPRK-207ENST00000368226 LINC00643Q86TS7 51 aa9.32□□□□□ -0.92
PTPRK-207ENST00000368226 CDC42SE2Q9NRR3 84 aa9.32□□□□□ -0.92
PTPRK-207ENST00000368226 UNQ6190/PRO20217Q6UXQ8 127 aa9.32□□□□□ -0.92
PTPRK-207ENST00000368226 COL5A1P20908 1838 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-207ENST00000368226 MYO18BQ8IUG5 2567 aa9.31□□□□□ -0.92
PTPRK-207ENST00000368226 IGLV1-51P01701 117 aa9.31□□□□□ -0.92
PTPRK-207ENST00000368226 C20orf197Q8N268 126 aa9.31□□□□□ -0.92
PTPRK-207ENST00000368226 YPEL4Q96NS1 127 aa9.31□□□□□ -0.92
PTPRK-207ENST00000368226 USP17L23D6RBM5 183 aa9.31□□□□□ -0.92
PTPRK-207ENST00000368226 IGLV4-60A0A075B6I1 120 aa9.3□□□□□ -0.92
PTPRK-207ENST00000368226 MRPS12O15235 138 aaKnown RBP9.3□□□□□ -0.92
PTPRK-207ENST00000368226 LINC00694P0DN24 101 aa9.3□□□□□ -0.92
PTPRK-207ENST00000368226 COX6A2Q02221 97 aa9.3□□□□□ -0.92
PTPRK-207ENST00000368226 PRR3P79522 188 aaKnown RBP9.3□□□□□ -0.92
PTPRK-207ENST00000368226 MPLKIPQ8TAP9 179 aa9.3□□□□□ -0.92
PTPRK-207ENST00000368226 TRBV30A0A0K0K1B3 111 aa9.28□□□□□ -0.92
PTPRK-207ENST00000368226 C6orf223Q8N319 242 aa9.28□□□□□ -0.92
PTPRK-207ENST00000368226 CENPFP49454 3210 aa9.28□□□□□ -0.92
PTPRK-207ENST00000368226 M0QXV9 152 aa9.28□□□□□ -0.92
PTPRK-207ENST00000368226 ZNF73O43830 326 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-207ENST00000368226 CPAMD8Q8IZJ3 1885 aa9.27□□□□□ -0.92
PTPRK-207ENST00000368226 Q6ZSN1 163 aa9.27□□□□□ -0.93
PTPRK-207ENST00000368226 MRPS36P82909 103 aaKnown RBP9.27□□□□□ -0.93
PTPRK-207ENST00000368226 C2orf91Q6ZV80 131 aa9.27□□□□□ -0.93
PTPRK-207ENST00000368226 LINC00242Q5T6M2 205 aa9.27□□□□□ -0.93
PTPRK-207ENST00000368226 NUPR2A6NF83 97 aa9.26□□□□□ -0.93
PTPRK-207ENST00000368226 FHL2Q14192 279 aa9.26□□□□□ -0.93
PTPRK-207ENST00000368226 PRR4Q16378 134 aa9.26□□□□□ -0.93
PTPRK-207ENST00000368226 ZNF580Q9UK33 172 aa9.26□□□□□ -0.93
PTPRK-207ENST00000368226 IGLV5-52A0A0A0MRZ9 124 aa9.25□□□□□ -0.93
PTPRK-207ENST00000368226 DHRS4-AS1Q9P1J3 65 aa9.25□□□□□ -0.93
PTPRK-207ENST00000368226 ADAMTS20P59510 1910 aa9.25□□□□□ -0.93
PTPRK-207ENST00000368226 PIEZO1Q92508 2521 aa9.25□□□□□ -0.93
PTPRK-207ENST00000368226 CHCHD7Q9BUK0 85 aa9.25□□□□□ -0.93
PTPRK-207ENST00000368226 Q8IZM0 81 aa9.25□□□□□ -0.93
PTPRK-207ENST00000368226 ZNF706Q9Y5V0 76 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-207ENST00000368226 IGIPA6NJ69 53 aa9.24□□□□□ -0.93
PTPRK-207ENST00000368226 SNURFQ9Y675 71 aa9.24□□□□□ -0.93
PTPRK-207ENST00000368226 J3KT08 172 aa9.24□□□□□ -0.93
PTPRK-207ENST00000368226 NDUFV3P56181 108 aaKnown RBP9.24□□□□□ -0.93
PTPRK-207ENST00000368226 C3orf22Q8N5N4 141 aa9.24□□□□□ -0.93
PTPRK-207ENST00000368226 CIRBP-AS1Q8TBR5 109 aa9.24□□□□□ -0.93
PTPRK-207ENST00000368226 C16orf95Q9H693 158 aa9.23□□□□□ -0.93
PTPRK-207ENST00000368226 SPTSSBQ8NFR3 76 aa9.23□□□□□ -0.93
PTPRK-207ENST00000368226 TIMM17BO60830 172 aa9.22□□□□□ -0.93
PTPRK-207ENST00000368226 BRK1Q8WUW1 75 aa9.22□□□□□ -0.93
PTPRK-207ENST00000368226 RETNLBQ9BQ08 111 aa9.22□□□□□ -0.93
PTPRK-207ENST00000368226 FAM30AQ9NZY2 134 aa9.22□□□□□ -0.93
PTPRK-207ENST00000368226 TRBV10-3A0A0K0K1G6 114 aa9.22□□□□□ -0.93
PTPRK-207ENST00000368226 SVIPQ8NHG7 77 aa9.22□□□□□ -0.93
PTPRK-207ENST00000368226 SMIM1B2RUZ4 78 aa9.21□□□□□ -0.93
PTPRK-207ENST00000368226 URB1-AS1Q96HZ7 61 aa9.21□□□□□ -0.93
PTPRK-207ENST00000368226 C2CD3Q4AC94 2353 aa9.21□□□□□ -0.93
PTPRK-207ENST00000368226 TSPEAR-AS2P59090 65 aa9.21□□□□□ -0.94
PTPRK-207ENST00000368226 COX17Q14061 63 aa9.21□□□□□ -0.94
PTPRK-207ENST00000368226 CNFNQ9BYD5 112 aa9.2□□□□□ -0.94
PTPRK-207ENST00000368226 LST1O00453 97 aa9.2□□□□□ -0.94
PTPRK-207ENST00000368226 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
PTPRK-207ENST00000368226 LINC00474Q9P2X8 69 aa9.19□□□□□ -0.94
PTPRK-207ENST00000368226 CELA1Q9UNI1 258 aa9.18□□□□□ -0.94
PTPRK-207ENST00000368226 C10orf25Q5T742 122 aa9.18□□□□□ -0.94
PTPRK-207ENST00000368226 REG3GQ6UW15 175 aa9.18□□□□□ -0.94
PTPRK-207ENST00000368226 EML5Q05BV3 1969 aa9.18□□□□□ -0.94
PTPRK-207ENST00000368226 LINC00310P59036 64 aa9.18□□□□□ -0.94
PTPRK-207ENST00000368226 C1orf137Q5JT78 98 aa9.17□□□□□ -0.94
PTPRK-207ENST00000368226 A0A087WYN8 130 aa9.17□□□□□ -0.94
PTPRK-207ENST00000368226 LYPD5Q6UWN5 251 aa9.17□□□□□ -0.94
PTPRK-207ENST00000368226 ADAMTSL4-AS1Q5T5F5 129 aa9.16□□□□□ -0.94
PTPRK-207ENST00000368226 TLN1Q9Y490 2541 aaKnown RBP9.16□□□□□ -0.94
PTPRK-207ENST00000368226 FAM236DA0A1B0GTK5 79 aa9.16□□□□□ -0.94
PTPRK-207ENST00000368226 NDUFC2O95298 119 aa9.16□□□□□ -0.94
PTPRK-207ENST00000368226 FAM236CP0DP71 79 aa9.16□□□□□ -0.94
PTPRK-207ENST00000368226 A8MTW9 85 aa9.15□□□□□ -0.94
PTPRK-207ENST00000368226 JMJD1CQ15652 2540 aa9.15□□□□□ -0.94
PTPRK-207ENST00000368226 EGFEM1PQ0D2K5 195 aa9.15□□□□□ -0.94
PTPRK-207ENST00000368226 C1orf134Q5TEV5 83 aa9.15□□□□□ -0.95
PTPRK-207ENST00000368226 ATP5EP2Q5VTU8 51 aa9.14□□□□□ -0.95
PTPRK-207ENST00000368226 RPL28P46779 137 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms