RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 USP9XQ93008 2570 aaPredicted RBP7.76□□□□□ -1.17
PTPRK-205ENST00000368213 A0A1B0GX51 115 aa7.76□□□□□ -1.17
PTPRK-205ENST00000368213 CLEC2BQ92478 149 aa7.76□□□□□ -1.17
PTPRK-205ENST00000368213 PYGO1Q9Y3Y4 419 aa7.75□□□□□ -1.17
PTPRK-205ENST00000368213 FN1P02751 2386 aaKnown RBP7.75□□□□□ -1.17
PTPRK-205ENST00000368213 LINC01620Q4KN68 170 aa7.75□□□□□ -1.17
PTPRK-205ENST00000368213 MP68P56378 58 aa7.75□□□□□ -1.17
PTPRK-205ENST00000368213 RNF185Q96GF1 192 aa7.75□□□□□ -1.17
PTPRK-205ENST00000368213 MDFIQ99750 246 aa7.75□□□□□ -1.17
PTPRK-205ENST00000368213 TRBV10-2A0A0K0K1G8 114 aa7.75□□□□□ -1.17
PTPRK-205ENST00000368213 M0R378 163 aa7.75□□□□□ -1.17
PTPRK-205ENST00000368213 EPG5Q9HCE0 2579 aa7.75□□□□□ -1.17
PTPRK-205ENST00000368213 FHL2Q14192 279 aa7.74□□□□□ -1.17
PTPRK-205ENST00000368213 PRUNE2Q8WUY3 3088 aa7.74□□□□□ -1.17
PTPRK-205ENST00000368213 TMEM223A0PJW6 202 aa7.74□□□□□ -1.17
PTPRK-205ENST00000368213 HRCT1Q6UXD1 115 aa7.74□□□□□ -1.17
PTPRK-205ENST00000368213 TRAV23DV6A0A075B6W5 121 aa7.74□□□□□ -1.17
PTPRK-205ENST00000368213 MRPL55Q7Z7F7 128 aaKnown RBP7.74□□□□□ -1.17
PTPRK-205ENST00000368213 USP17L23D6RBM5 183 aa7.74□□□□□ -1.17
PTPRK-205ENST00000368213 SPINK6Q6UWN8 80 aa7.74□□□□□ -1.17
PTPRK-205ENST00000368213 RNASE8Q8TDE3 154 aaKnown RBP7.73□□□□□ -1.17
PTPRK-205ENST00000368213 RPL28P46779 137 aaKnown RBP7.73□□□□□ -1.17
PTPRK-205ENST00000368213 EXPH5Q8NEV8 1989 aa7.73□□□□□ -1.17
PTPRK-205ENST00000368213 IGLV9-49A0A0B4J1Y8 123 aa7.73□□□□□ -1.17
PTPRK-205ENST00000368213 M0QXV9 152 aa7.73□□□□□ -1.17
PTPRK-205ENST00000368213 HIGD1BQ9P298 99 aa7.73□□□□□ -1.17
PTPRK-205ENST00000368213 CPAMD8Q8IZJ3 1885 aa7.73□□□□□ -1.17
PTPRK-205ENST00000368213 COA6Q5JTJ3 125 aaKnown RBP7.72□□□□□ -1.17
PTPRK-205ENST00000368213 DSCAML1Q8TD84 2053 aa7.72□□□□□ -1.17
PTPRK-205ENST00000368213 ATG2AQ2TAZ0 1938 aa7.72□□□□□ -1.17
PTPRK-205ENST00000368213 CYSRT1A8MQ03 144 aa7.72□□□□□ -1.17
PTPRK-205ENST00000368213 PDE6GP18545 87 aa7.72□□□□□ -1.17
PTPRK-205ENST00000368213 FXYD2P54710 66 aa7.72□□□□□ -1.17
PTPRK-205ENST00000368213 MRPS36P82909 103 aaKnown RBP7.72□□□□□ -1.17
PTPRK-205ENST00000368213 USP9YO00507 2555 aaPredicted RBP7.72□□□□□ -1.17
PTPRK-205ENST00000368213 SVIPQ8NHG7 77 aa7.71□□□□□ -1.17
PTPRK-205ENST00000368213 IGKV4-1P06312 121 aa7.71□□□□□ -1.17
PTPRK-205ENST00000368213 LYPD5Q6UWN5 251 aa7.71□□□□□ -1.17
PTPRK-205ENST00000368213 SBSPONQ8IVN8 264 aa7.71□□□□□ -1.17
PTPRK-205ENST00000368213 WWC2-AS2Q96NR7 200 aa7.71□□□□□ -1.17
PTPRK-205ENST00000368213 HCFC1P51610 2035 aa7.71□□□□□ -1.18
PTPRK-205ENST00000368213 WFDC10BQ8IUB3 73 aa7.71□□□□□ -1.18
PTPRK-205ENST00000368213 BEAN1Q3B7T3 259 aa7.71□□□□□ -1.18
PTPRK-205ENST00000368213 C6orf223Q8N319 242 aa7.71□□□□□ -1.18
PTPRK-205ENST00000368213 DHRS4-AS1Q9P1J3 65 aa7.71□□□□□ -1.18
PTPRK-205ENST00000368213 CDC42SE2Q9NRR3 84 aa7.7□□□□□ -1.18
PTPRK-205ENST00000368213 MUC7Q8TAX7 377 aa7.7□□□□□ -1.18
PTPRK-205ENST00000368213 SETD2Q9BYW2 2564 aaPredicted RBP7.7□□□□□ -1.18
PTPRK-205ENST00000368213 ACYP1P07311 99 aa7.7□□□□□ -1.18
PTPRK-205ENST00000368213 LINC00308Q8TCZ7 52 aa7.7□□□□□ -1.18
PTPRK-205ENST00000368213 PTPRBP23467 1997 aa7.7□□□□□ -1.18
PTPRK-205ENST00000368213 MRPS12O15235 138 aaKnown RBP7.7□□□□□ -1.18
PTPRK-205ENST00000368213 C6orf99Q4VX62 202 aa7.7□□□□□ -1.18
PTPRK-205ENST00000368213 C14orf132Q9NPU4 83 aa7.7□□□□□ -1.18
PTPRK-205ENST00000368213 PKD1L2Q7Z442 2459 aa7.7□□□□□ -1.18
PTPRK-205ENST00000368213 K7EP13 123 aa7.69□□□□□ -1.18
PTPRK-205ENST00000368213 POM121L12Q8N7R1 296 aa7.69□□□□□ -1.18
PTPRK-205ENST00000368213 A8MZ25 164 aa7.69□□□□□ -1.18
PTPRK-205ENST00000368213 SPATA12Q7Z6I5 190 aa7.69□□□□□ -1.18
PTPRK-205ENST00000368213 NRACQ8N912 160 aa7.69□□□□□ -1.18
PTPRK-205ENST00000368213 TET2Q6N021 2002 aaPredicted RBP7.69□□□□□ -1.18
PTPRK-205ENST00000368213 SS18L2Q9UHA2 77 aa7.69□□□□□ -1.18
PTPRK-205ENST00000368213 Q8IZM0 81 aa7.69□□□□□ -1.18
PTPRK-205ENST00000368213 CELA1Q9UNI1 258 aa7.69□□□□□ -1.18
PTPRK-205ENST00000368213 POLR2KP53803 58 aaKnown RBP7.68□□□□□ -1.18
PTPRK-205ENST00000368213 IGKV3D-7A0A0C4DH55 119 aa7.68□□□□□ -1.18
PTPRK-205ENST00000368213 K7ERS5 55 aa7.68□□□□□ -1.18
PTPRK-205ENST00000368213 LINC01556Q5JQF7 62 aa7.68□□□□□ -1.18
PTPRK-205ENST00000368213 C1orf137Q5JT78 98 aa7.68□□□□□ -1.18
PTPRK-205ENST00000368213 POLQO75417 2590 aa7.68□□□□□ -1.18
PTPRK-205ENST00000368213 C2CD3Q4AC94 2353 aa7.68□□□□□ -1.18
PTPRK-205ENST00000368213 TRBV30A0A0K0K1B3 111 aa7.68□□□□□ -1.18
PTPRK-205ENST00000368213 UPK3BQ9BT76 320 aa7.68□□□□□ -1.18
PTPRK-205ENST00000368213 EGFEM1PQ0D2K5 195 aa7.67□□□□□ -1.18
PTPRK-205ENST00000368213 COX17Q14061 63 aa7.67□□□□□ -1.18
PTPRK-205ENST00000368213 A0A0B4J2C4 111 aa7.67□□□□□ -1.18
PTPRK-205ENST00000368213 BPY2O14599 106 aa7.67□□□□□ -1.18
PTPRK-205ENST00000368213 UNQ6190/PRO20217Q6UXQ8 127 aa7.67□□□□□ -1.18
PTPRK-205ENST00000368213 TCL1BO95988 128 aa7.66□□□□□ -1.18
PTPRK-205ENST00000368213 SEC61GP60059 68 aa7.66□□□□□ -1.18
PTPRK-205ENST00000368213 COX6A2Q02221 97 aa7.66□□□□□ -1.18
PTPRK-205ENST00000368213 SLPIP03973 132 aa7.65□□□□□ -1.18
PTPRK-205ENST00000368213 IGLV4-60A0A075B6I1 120 aa7.65□□□□□ -1.18
PTPRK-205ENST00000368213 CASC2Q6XLA1 102 aa7.65□□□□□ -1.18
PTPRK-205ENST00000368213 CIRBP-AS1Q8TBR5 109 aa7.64□□□□□ -1.19
PTPRK-205ENST00000368213 VPREB1P12018 145 aa7.64□□□□□ -1.19
PTPRK-205ENST00000368213 SPATA3Q8NHX4 192 aa7.64□□□□□ -1.19
PTPRK-205ENST00000368213 H3BT86 120 aa7.63□□□□□ -1.19
PTPRK-205ENST00000368213 ZNF73O43830 326 aaPredicted RBP7.63□□□□□ -1.19
PTPRK-205ENST00000368213 REG3GQ6UW15 175 aa7.63□□□□□ -1.19
PTPRK-205ENST00000368213 WFDC9Q8NEX5 89 aa7.63□□□□□ -1.19
PTPRK-205ENST00000368213 UNC80Q8N2C7 3258 aa7.63□□□□□ -1.19
PTPRK-205ENST00000368213 F8P00451 2351 aa7.62□□□□□ -1.19
PTPRK-205ENST00000368213 FAM229AH3BQW9 127 aa7.62□□□□□ -1.19
PTPRK-205ENST00000368213 C5orf47Q569G3 176 aa7.62□□□□□ -1.19
PTPRK-205ENST00000368213 GAS8-AS1O95177 125 aa7.61□□□□□ -1.19
PTPRK-205ENST00000368213 C9orf116Q5BN46 136 aaPredicted RBP7.61□□□□□ -1.19
PTPRK-205ENST00000368213 C10orf25Q5T742 122 aa7.61□□□□□ -1.19
PTPRK-205ENST00000368213 BRK1Q8WUW1 75 aa7.61□□□□□ -1.19
PTPRK-205ENST00000368213 CCKP06307 115 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms