RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 LELP1Q5T871 98 aa10.33□□□□□ -0.76
NEK2-201ENST00000366998 SRSF9Q13242 221 aaKnown RBP eCLIP10.32□□□□□ -0.76
NEK2-201ENST00000366998 CLPSL2Q6UWE3 100 aa10.32□□□□□ -0.76
NEK2-201ENST00000366998 Q6ZVH6 145 aa10.32□□□□□ -0.76
NEK2-201ENST00000366998 NDUFA12Q9UI09 145 aa10.32□□□□□ -0.76
NEK2-201ENST00000366998 DEFB131BA0A096LNP1 70 aa10.32□□□□□ -0.76
NEK2-201ENST00000366998 H3BNG1 76 aa10.32□□□□□ -0.76
NEK2-201ENST00000366998 K7EP13 123 aa10.32□□□□□ -0.76
NEK2-201ENST00000366998 LINC00959A0A1B0GUT2 108 aa10.31□□□□□ -0.76
NEK2-201ENST00000366998 SMIM1B2RUZ4 78 aa10.31□□□□□ -0.76
NEK2-201ENST00000366998 TM2D2Q9BX73 214 aa10.31□□□□□ -0.76
NEK2-201ENST00000366998 TAX1BP3O14907 124 aa10.3□□□□□ -0.76
NEK2-201ENST00000366998 ANGP03950 147 aaKnown RBP10.3□□□□□ -0.76
NEK2-201ENST00000366998 LYPD5Q6UWN5 251 aa10.3□□□□□ -0.76
NEK2-201ENST00000366998 Q8N3U1 123 aa10.3□□□□□ -0.76
NEK2-201ENST00000366998 C10orf126Q8N4M7 172 aa10.3□□□□□ -0.76
NEK2-201ENST00000366998 IGLV5-39A0A0G2JS06 123 aa10.3□□□□□ -0.76
NEK2-201ENST00000366998 SS18Q15532 418 aa10.3□□□□□ -0.76
NEK2-201ENST00000366998 ZFAND6Q6FIF0 208 aa10.3□□□□□ -0.76
NEK2-201ENST00000366998 A0A0J9YXY3 114 aa10.29□□□□□ -0.76
NEK2-201ENST00000366998 LINC00269Q8N2A0 174 aa10.29□□□□□ -0.76
NEK2-201ENST00000366998 SPANXB1Q9NS25 103 aaPredicted RBP10.29□□□□□ -0.76
NEK2-201ENST00000366998 NHP2Q9NX24 153 aaKnown RBP10.29□□□□□ -0.76
NEK2-201ENST00000366998 COX11Q9Y6N1 276 aa10.29□□□□□ -0.76
NEK2-201ENST00000366998 CCL25O15444 150 aa10.27□□□□□ -0.76
NEK2-201ENST00000366998 RAB37Q96AX2 223 aa10.27□□□□□ -0.76
NEK2-201ENST00000366998 TMEM238C9JI98 176 aa10.27□□□□□ -0.77
NEK2-201ENST00000366998 SMIM13P0DJ93 91 aa10.27□□□□□ -0.77
NEK2-201ENST00000366998 XCL1P47992 114 aa10.27□□□□□ -0.77
NEK2-201ENST00000366998 TRAV10A0A0B4J240 114 aa10.26□□□□□ -0.77
NEK2-201ENST00000366998 IGHV3OR16-9A0A0B4J2B5 98 aa10.26□□□□□ -0.77
NEK2-201ENST00000366998 NDUFA1O15239 70 aa10.26□□□□□ -0.77
NEK2-201ENST00000366998 C5orf38Q86SI9 138 aa10.26□□□□□ -0.77
NEK2-201ENST00000366998 HUWE1Q7Z6Z7 4374 aaKnown RBP10.26□□□□□ -0.77
NEK2-201ENST00000366998 K7ERJ3 54 aa10.25□□□□□ -0.77
NEK2-201ENST00000366998 REG3AQ06141 175 aa10.25□□□□□ -0.77
NEK2-201ENST00000366998 Q9H8V8 135 aa10.25□□□□□ -0.77
NEK2-201ENST00000366998 TMEM238LA0A1B0GVL6 79 aa10.25□□□□□ -0.77
NEK2-201ENST00000366998 A6NJY4 79 aa10.25□□□□□ -0.77
NEK2-201ENST00000366998 TOMM7Q9P0U1 55 aa10.25□□□□□ -0.77
NEK2-201ENST00000366998 A0A087WZ39 114 aa10.24□□□□□ -0.77
NEK2-201ENST00000366998 IGHV3-30P01768 117 aa10.24□□□□□ -0.77
NEK2-201ENST00000366998 IGHV3-30-5P0DP03 117 aa10.24□□□□□ -0.77
NEK2-201ENST00000366998 LURAP1LQ8IV03 231 aa10.24□□□□□ -0.77
NEK2-201ENST00000366998 IGLV10-54A0A075B6I4 117 aa10.23□□□□□ -0.77
NEK2-201ENST00000366998 IGHV3-33P01772 117 aa10.23□□□□□ -0.77
NEK2-201ENST00000366998 COX7B2Q8TF08 81 aa10.23□□□□□ -0.77
NEK2-201ENST00000366998 WFDC10BQ8IUB3 73 aa10.23□□□□□ -0.77
NEK2-201ENST00000366998 ZNF625Q96I27 306 aaPredicted RBP10.23□□□□□ -0.77
NEK2-201ENST00000366998 KLK12Q9UKR0 248 aa10.23□□□□□ -0.77
NEK2-201ENST00000366998 ESRGQ1W209 222 aa10.22□□□□□ -0.77
NEK2-201ENST00000366998 CHCHD10Q8WYQ3 142 aaPredicted RBP10.22□□□□□ -0.77
NEK2-201ENST00000366998 NAA38Q9BRA0 125 aaKnown RBP10.22□□□□□ -0.77
NEK2-201ENST00000366998 C9orf118A6NHY6 69 aa10.21□□□□□ -0.77
NEK2-201ENST00000366998 LITAFQ99732 161 aa10.21□□□□□ -0.77
NEK2-201ENST00000366998 H3BUT2 72 aa10.21□□□□□ -0.78
NEK2-201ENST00000366998 VAMP3Q15836 100 aa10.21□□□□□ -0.78
NEK2-201ENST00000366998 MUSTN1Q8IVN3 82 aa10.21□□□□□ -0.78
NEK2-201ENST00000366998 PRSS2P07478 247 aa10.2□□□□□ -0.78
NEK2-201ENST00000366998 CIRBPQ14011 172 aaKnown RBP10.2□□□□□ -0.78
NEK2-201ENST00000366998 ADAMTSL4-AS1Q5T5F5 129 aa10.2□□□□□ -0.78
NEK2-201ENST00000366998 CD164L2Q6UWJ8 174 aa10.2□□□□□ -0.78
NEK2-201ENST00000366998 B9D2Q9BPU9 175 aa10.2□□□□□ -0.78
NEK2-201ENST00000366998 SPANXDQ9BXN6 97 aa10.2□□□□□ -0.78
NEK2-201ENST00000366998 SPANXCQ9NY87 97 aa10.2□□□□□ -0.78
NEK2-201ENST00000366998 TIMM17BO60830 172 aa10.19□□□□□ -0.78
NEK2-201ENST00000366998 APOMO95445 188 aa10.19□□□□□ -0.78
NEK2-201ENST00000366998 MEIG1Q5JSS6 88 aa10.19□□□□□ -0.78
NEK2-201ENST00000366998 C15orf53Q8NAA6 179 aa10.19□□□□□ -0.78
NEK2-201ENST00000366998 COX7A2LO14548 114 aa10.19□□□□□ -0.78
NEK2-201ENST00000366998 CRPP02741 224 aa10.19□□□□□ -0.78
NEK2-201ENST00000366998 HERV-K104P63124 156 aa10.19□□□□□ -0.78
NEK2-201ENST00000366998 RPL24P83731 157 aaKnown RBP10.19□□□□□ -0.78
NEK2-201ENST00000366998 MIAQ16674 131 aa10.19□□□□□ -0.78
NEK2-201ENST00000366998 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
NEK2-201ENST00000366998 A0A1B0GWB2 263 aa10.18□□□□□ -0.78
NEK2-201ENST00000366998 NPC2P61916 151 aa10.18□□□□□ -0.78
NEK2-201ENST00000366998 PRR34Q9NV39 138 aa10.18□□□□□ -0.78
NEK2-201ENST00000366998 DAND5Q8N907 189 aa10.17□□□□□ -0.78
NEK2-201ENST00000366998 UBE2WQ96B02 151 aa10.17□□□□□ -0.78
NEK2-201ENST00000366998 A4D1N5 150 aa10.17□□□□□ -0.78
NEK2-201ENST00000366998 MALP21145 153 aa10.17□□□□□ -0.78
NEK2-201ENST00000366998 ENHOQ6UWT2 76 aa10.17□□□□□ -0.78
NEK2-201ENST00000366998 LINC01561Q8N1V8 128 aa10.17□□□□□ -0.78
NEK2-201ENST00000366998 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
NEK2-201ENST00000366998 GAGE12HA6NDE8 117 aa10.16□□□□□ -0.78
NEK2-201ENST00000366998 IGLL5B9A064 214 aa10.16□□□□□ -0.78
NEK2-201ENST00000366998 C6orf226Q5I0X4 101 aa10.16□□□□□ -0.78
NEK2-201ENST00000366998 FOXI1Q12951 378 aa10.15□□□□□ -0.78
NEK2-201ENST00000366998 COL7A1Q02388 2944 aa10.15□□□□□ -0.78
NEK2-201ENST00000366998 CFC1BP0CG36 223 aa10.15□□□□□ -0.79
NEK2-201ENST00000366998 CFC1P0CG37 223 aa10.15□□□□□ -0.79
NEK2-201ENST00000366998 A0A1W2PPM0 123 aa10.14□□□□□ -0.79
NEK2-201ENST00000366998 Q8IZM0 81 aa10.14□□□□□ -0.79
NEK2-201ENST00000366998 IFITM1P13164 125 aa10.13□□□□□ -0.79
NEK2-201ENST00000366998 PGPEP1Q9NXJ5 209 aa10.13□□□□□ -0.79
NEK2-201ENST00000366998 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.13□□□□□ -0.79
NEK2-201ENST00000366998 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
NEK2-201ENST00000366998 FABP2P12104 132 aa10.13□□□□□ -0.79
NEK2-201ENST00000366998 UBE2V1Q13404 147 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms