RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 LINC00310P59036 64 aa8.85□□□□□ -0.99
CDC42BPA-203ENST00000366766 CHKB-CPT1BH3BT56 60 aa8.85□□□□□ -0.99
CDC42BPA-203ENST00000366766 SHISA2Q6UWI4 295 aa8.85□□□□□ -0.99
CDC42BPA-203ENST00000366766 F8WDY8 70 aa8.85□□□□□ -0.99
CDC42BPA-203ENST00000366766 UBE2D3P61077 147 aa8.85□□□□□ -0.99
CDC42BPA-203ENST00000366766 UBE2D2P62837 147 aa8.85□□□□□ -0.99
CDC42BPA-203ENST00000366766 SERP2Q8N6R1 65 aa8.85□□□□□ -0.99
CDC42BPA-203ENST00000366766 TRAV23DV6A0A075B6W5 121 aa8.84□□□□□ -0.99
CDC42BPA-203ENST00000366766 NDUFA7O95182 113 aa8.84□□□□□ -0.99
CDC42BPA-203ENST00000366766 C11orf21Q9P2W6 132 aa8.84□□□□□ -0.99
CDC42BPA-203ENST00000366766 PLA2G5P39877 138 aa8.84□□□□□ -1
CDC42BPA-203ENST00000366766 PRR9Q5T870 116 aa8.84□□□□□ -1
CDC42BPA-203ENST00000366766 V9GYY9 64 aa8.84□□□□□ -1
CDC42BPA-203ENST00000366766 BPTFQ12830 3046 aa8.83□□□□□ -1
CDC42BPA-203ENST00000366766 IGHV4-28A0A0C4DH34 117 aa8.83□□□□□ -1
CDC42BPA-203ENST00000366766 FLNBO75369 2602 aaKnown RBP8.83□□□□□ -1
CDC42BPA-203ENST00000366766 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.82□□□□□ -1
CDC42BPA-203ENST00000366766 M0R378 163 aa8.82□□□□□ -1
CDC42BPA-203ENST00000366766 DEFB131BA0A096LNP1 70 aa8.82□□□□□ -1
CDC42BPA-203ENST00000366766 SYCNQ0VAF6 134 aa8.82□□□□□ -1
CDC42BPA-203ENST00000366766 Q8N976 141 aa8.82□□□□□ -1
CDC42BPA-203ENST00000366766 ESM1Q9NQ30 184 aa8.81□□□□□ -1
CDC42BPA-203ENST00000366766 GOLGB1Q14789 3259 aaKnown RBP8.81□□□□□ -1
CDC42BPA-203ENST00000366766 FAM236DA0A1B0GTK5 79 aa8.81□□□□□ -1
CDC42BPA-203ENST00000366766 FAM236CP0DP71 79 aa8.81□□□□□ -1
CDC42BPA-203ENST00000366766 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
CDC42BPA-203ENST00000366766 TRAV10A0A0B4J240 114 aa8.81□□□□□ -1
CDC42BPA-203ENST00000366766 LINC01546A6NGU7 62 aa8.8□□□□□ -1
CDC42BPA-203ENST00000366766 LINC01561Q8N1V8 128 aa8.8□□□□□ -1
CDC42BPA-203ENST00000366766 LINC00474Q9P2X8 69 aa8.8□□□□□ -1
CDC42BPA-203ENST00000366766 WFDC11Q8NEX6 87 aa8.8□□□□□ -1
CDC42BPA-203ENST00000366766 DEFB4AO15263 64 aa8.8□□□□□ -1
CDC42BPA-203ENST00000366766 ZNF706Q9Y5V0 76 aaPredicted RBP8.8□□□□□ -1
CDC42BPA-203ENST00000366766 A0A087WZ39 114 aa8.79□□□□□ -1
CDC42BPA-203ENST00000366766 SDIM1Q6ZPB5 146 aa8.79□□□□□ -1
CDC42BPA-203ENST00000366766 AMELXQ99217 191 aa8.79□□□□□ -1
CDC42BPA-203ENST00000366766 C6orf99Q4VX62 202 aa8.79□□□□□ -1
CDC42BPA-203ENST00000366766 LINC01006Q8NI28 216 aa8.79□□□□□ -1
CDC42BPA-203ENST00000366766 BEAN1Q3B7T3 259 aa8.78□□□□□ -1
CDC42BPA-203ENST00000366766 Q6JHZ5 121 aa8.78□□□□□ -1
CDC42BPA-203ENST00000366766 IGLV4-69A0A075B6H9 119 aa8.78□□□□□ -1
CDC42BPA-203ENST00000366766 FAM19A3Q7Z5A8 133 aa8.78□□□□□ -1
CDC42BPA-203ENST00000366766 LINC00959A0A1B0GUT2 108 aa8.78□□□□□ -1
CDC42BPA-203ENST00000366766 RPL28P46779 137 aaKnown RBP8.78□□□□□ -1
CDC42BPA-203ENST00000366766 H0Y9J4 135 aa8.78□□□□□ -1
CDC42BPA-203ENST00000366766 CCKP06307 115 aa8.78□□□□□ -1
CDC42BPA-203ENST00000366766 ZNF843Q8N446 348 aa8.78□□□□□ -1
CDC42BPA-203ENST00000366766 MRPL55Q7Z7F7 128 aaKnown RBP8.77□□□□□ -1.01
CDC42BPA-203ENST00000366766 A0A1B0GUV1 79 aa8.77□□□□□ -1.01
CDC42BPA-203ENST00000366766 COX7CP15954 63 aa8.76□□□□□ -1.01
CDC42BPA-203ENST00000366766 ZNF73O43830 326 aaPredicted RBP8.76□□□□□ -1.01
CDC42BPA-203ENST00000366766 C20orf197Q8N268 126 aa8.76□□□□□ -1.01
CDC42BPA-203ENST00000366766 URB1-AS1Q96HZ7 61 aa8.76□□□□□ -1.01
CDC42BPA-203ENST00000366766 ENHOQ6UWT2 76 aa8.76□□□□□ -1.01
CDC42BPA-203ENST00000366766 LINC00242Q5T6M2 205 aa8.75□□□□□ -1.01
CDC42BPA-203ENST00000366766 NDUFC2-KCTD14E9PQ53 114 aa8.75□□□□□ -1.01
CDC42BPA-203ENST00000366766 USP17L23D6RBM5 183 aa8.75□□□□□ -1.01
CDC42BPA-203ENST00000366766 IGLV2-18A0A075B6J9 118 aa8.74□□□□□ -1.01
CDC42BPA-203ENST00000366766 SEC61GP60059 68 aa8.74□□□□□ -1.01
CDC42BPA-203ENST00000366766 EGFEM1PQ0D2K5 195 aa8.74□□□□□ -1.01
CDC42BPA-203ENST00000366766 SMIM11BQ8TCY0 68 aa8.74□□□□□ -1.01
CDC42BPA-203ENST00000366766 KPRPQ5T749 579 aaPredicted RBP8.74□□□□□ -1.01
CDC42BPA-203ENST00000366766 IGLV1-51P01701 117 aa8.74□□□□□ -1.01
CDC42BPA-203ENST00000366766 AKAP13Q12802 2813 aa8.74□□□□□ -1.01
CDC42BPA-203ENST00000366766 SMIM1B2RUZ4 78 aa8.73□□□□□ -1.01
CDC42BPA-203ENST00000366766 LOC107984640A0A0U1RRK4 108 aa8.73□□□□□ -1.01
CDC42BPA-203ENST00000366766 C5orf47Q569G3 176 aa8.73□□□□□ -1.01
CDC42BPA-203ENST00000366766 FLNAP21333 2647 aaKnown RBP8.73□□□□□ -1.01
CDC42BPA-203ENST00000366766 BBC3Q96PG8 261 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPA-203ENST00000366766 Q6ZS46 218 aa8.73□□□□□ -1.01
CDC42BPA-203ENST00000366766 HIGD2AQ9BW72 106 aa8.73□□□□□ -1.01
CDC42BPA-203ENST00000366766 Q6ZQY7 126 aa8.72□□□□□ -1.01
CDC42BPA-203ENST00000366766 PROK1P58294 105 aa8.72□□□□□ -1.01
CDC42BPA-203ENST00000366766 ODF3L2Q3SX64 289 aa8.72□□□□□ -1.01
CDC42BPA-203ENST00000366766 C10orf99Q6UWK7 81 aa8.71□□□□□ -1.01
CDC42BPA-203ENST00000366766 MAST4O15021 2626 aa8.71□□□□□ -1.01
CDC42BPA-203ENST00000366766 C16orf95Q9H693 158 aa8.71□□□□□ -1.01
CDC42BPA-203ENST00000366766 POM121L12Q8N7R1 296 aa8.71□□□□□ -1.02
CDC42BPA-203ENST00000366766 IGKV4-1P06312 121 aa8.7□□□□□ -1.02
CDC42BPA-203ENST00000366766 GAS8-AS1O95177 125 aa8.7□□□□□ -1.02
CDC42BPA-203ENST00000366766 XAGE1AQ9HD64 81 aa8.7□□□□□ -1.02
CDC42BPA-203ENST00000366766 A0A096LNJ9 63 aa8.7□□□□□ -1.02
CDC42BPA-203ENST00000366766 FAM19A1Q7Z5A9 133 aa8.7□□□□□ -1.02
CDC42BPA-203ENST00000366766 XGP55808 180 aa8.7□□□□□ -1.02
CDC42BPA-203ENST00000366766 PRR15LQ9BU68 103 aa8.7□□□□□ -1.02
CDC42BPA-203ENST00000366766 IGKV2-24A0A0C4DH68 120 aa8.69□□□□□ -1.02
CDC42BPA-203ENST00000366766 NTM-AS1Q6ZSK4 140 aa8.69□□□□□ -1.02
CDC42BPA-203ENST00000366766 Q8N814 137 aa8.69□□□□□ -1.02
CDC42BPA-203ENST00000366766 C7orf33Q8WU49 177 aa8.69□□□□□ -1.02
CDC42BPA-203ENST00000366766 TRAV7A0A075B6U4 112 aa8.68□□□□□ -1.02
CDC42BPA-203ENST00000366766 TRANK1O15050 2925 aa8.67□□□□□ -1.02
CDC42BPA-203ENST00000366766 INAFM1C9JVW0 142 aa8.67□□□□□ -1.02
CDC42BPA-203ENST00000366766 SLPIP03973 132 aa8.67□□□□□ -1.02
CDC42BPA-203ENST00000366766 C1orf158Q8N1D5 194 aa8.67□□□□□ -1.02
CDC42BPA-203ENST00000366766 C2orf48Q96LS8 159 aa8.66□□□□□ -1.02
CDC42BPA-203ENST00000366766 CYSRT1A8MQ03 144 aa8.66□□□□□ -1.02
CDC42BPA-203ENST00000366766 LY6G6DO95868 133 aa8.66□□□□□ -1.02
CDC42BPA-203ENST00000366766 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.65□□□□□ -1.02
CDC42BPA-203ENST00000366766 CFAP46Q8IYW2 2715 aa8.65□□□□□ -1.03
CDC42BPA-203ENST00000366766 MGAM2Q2M2H8 2515 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms