RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 RBMY1EA6NEQ0 496 aaKnown RBP9.09□□□□□ -0.95
RTFDC1-202ENST00000357348 B5MCH6 92 aa9.09□□□□□ -0.95
RTFDC1-202ENST00000357348 RBMY1DP0C7P1 496 aaKnown RBP9.09□□□□□ -0.95
RTFDC1-202ENST00000357348 BEAN1Q3B7T3 259 aa9.09□□□□□ -0.95
RTFDC1-202ENST00000357348 CHCHD7Q9BUK0 85 aa9.09□□□□□ -0.95
RTFDC1-202ENST00000357348 NOTCH1P46531 2555 aa9.09□□□□□ -0.95
RTFDC1-202ENST00000357348 A8MTW9 85 aa9.09□□□□□ -0.95
RTFDC1-202ENST00000357348 STHQ8IWL8 128 aa9.09□□□□□ -0.95
RTFDC1-202ENST00000357348 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
RTFDC1-202ENST00000357348 HTN1P15515 57 aa9.08□□□□□ -0.96
RTFDC1-202ENST00000357348 RPL35AP18077 110 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-202ENST00000357348 IGLV5-45A0A087WSX0 123 aa9.08□□□□□ -0.96
RTFDC1-202ENST00000357348 CCDC179H3BU77 68 aa9.08□□□□□ -0.96
RTFDC1-202ENST00000357348 PRSS2P07478 247 aa9.08□□□□□ -0.96
RTFDC1-202ENST00000357348 RBMY1A1P0DJD3 496 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-202ENST00000357348 RBMY1CP0DJD4 496 aa9.08□□□□□ -0.96
RTFDC1-202ENST00000357348 RBMY1FQ15415 496 aaKnown RBP9.08□□□□□ -0.96
RTFDC1-202ENST00000357348 C19orf73Q9NVV2 129 aa9.08□□□□□ -0.96
RTFDC1-202ENST00000357348 NBEAL2Q6ZNJ1 2754 aa9.07□□□□□ -0.96
RTFDC1-202ENST00000357348 CEMP1Q6PRD7 247 aaPredicted RBP9.07□□□□□ -0.96
RTFDC1-202ENST00000357348 TRBV7-7A0A0K0K1E9 115 aa9.07□□□□□ -0.96
RTFDC1-202ENST00000357348 NDUFA1O15239 70 aa9.06□□□□□ -0.96
RTFDC1-202ENST00000357348 TIRAPP58753 221 aa9.06□□□□□ -0.96
RTFDC1-202ENST00000357348 XCL2Q9UBD3 114 aa9.06□□□□□ -0.96
RTFDC1-202ENST00000357348 TNFRSF18Q9Y5U5 241 aa9.06□□□□□ -0.96
RTFDC1-202ENST00000357348 PRM2P04554 102 aa9.05□□□□□ -0.96
RTFDC1-202ENST00000357348 CLEC2BQ92478 149 aa9.05□□□□□ -0.96
RTFDC1-202ENST00000357348 NBEAL1Q6ZS30 2694 aa9.05□□□□□ -0.96
RTFDC1-202ENST00000357348 MGAM2Q2M2H8 2515 aa9.05□□□□□ -0.96
RTFDC1-202ENST00000357348 A8MZ25 164 aa9.04□□□□□ -0.96
RTFDC1-202ENST00000357348 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
RTFDC1-202ENST00000357348 IGHV3OR16-12A0A075B7B8 117 aa9.04□□□□□ -0.96
RTFDC1-202ENST00000357348 KRTAP10-11P60412 298 aa9.04□□□□□ -0.96
RTFDC1-202ENST00000357348 RNASE13Q5GAN3 156 aaKnown RBP9.03□□□□□ -0.96
RTFDC1-202ENST00000357348 Q6ZSN1 163 aa9.03□□□□□ -0.96
RTFDC1-202ENST00000357348 IGLV5-39A0A0G2JS06 123 aa9.03□□□□□ -0.96
RTFDC1-202ENST00000357348 FAM19A3Q7Z5A8 133 aa9.03□□□□□ -0.96
RTFDC1-202ENST00000357348 LINC00467Q9BRT7 94 aa9.03□□□□□ -0.96
RTFDC1-202ENST00000357348 IGHV3-73A0A0B4J1V6 119 aa9.02□□□□□ -0.97
RTFDC1-202ENST00000357348 ACYP1P07311 99 aa9.02□□□□□ -0.97
RTFDC1-202ENST00000357348 CMC4P56277 68 aaPredicted RBP9.02□□□□□ -0.97
RTFDC1-202ENST00000357348 Q9UF83 564 aa9.02□□□□□ -0.97
RTFDC1-202ENST00000357348 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
RTFDC1-202ENST00000357348 PRB2P02812 416 aaPredicted RBP9.01□□□□□ -0.97
RTFDC1-202ENST00000357348 TMEM101Q96IK0 257 aa9.01□□□□□ -0.97
RTFDC1-202ENST00000357348 PPDPFQ9H3Y8 114 aa9.01□□□□□ -0.97
RTFDC1-202ENST00000357348 CDKN2A-AS1Q9UH64 79 aa9.01□□□□□ -0.97
RTFDC1-202ENST00000357348 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.01□□□□□ -0.97
RTFDC1-202ENST00000357348 IGKV2-29A2NJV5 120 aaPredicted RBP9.01□□□□□ -0.97
RTFDC1-202ENST00000357348 IMUPQ9GZP8 106 aa9.01□□□□□ -0.97
RTFDC1-202ENST00000357348 COX7A2LO14548 114 aa9□□□□□ -0.97
RTFDC1-202ENST00000357348 WIPF1O43516 503 aa9□□□□□ -0.97
RTFDC1-202ENST00000357348 NPC2P61916 151 aa9□□□□□ -0.97
RTFDC1-202ENST00000357348 ZNF415Q09FC8 603 aa9□□□□□ -0.97
RTFDC1-202ENST00000357348 LINC00308Q8TCZ7 52 aa9□□□□□ -0.97
RTFDC1-202ENST00000357348 FAM110AQ9BQ89 295 aa9□□□□□ -0.97
RTFDC1-202ENST00000357348 SDIM1Q6ZPB5 146 aa9□□□□□ -0.97
RTFDC1-202ENST00000357348 GIG44P09565 113 aaPredicted RBP8.99□□□□□ -0.97
RTFDC1-202ENST00000357348 CIRBPQ14011 172 aaKnown RBP8.99□□□□□ -0.97
RTFDC1-202ENST00000357348 C11orf72Q8NBR9 251 aa8.99□□□□□ -0.97
RTFDC1-202ENST00000357348 LINC01587Q99440 93 aa8.99□□□□□ -0.97
RTFDC1-202ENST00000357348 DNHD1Q96M86 4753 aa8.99□□□□□ -0.97
RTFDC1-202ENST00000357348 RS1O15537 224 aa8.99□□□□□ -0.97
RTFDC1-202ENST00000357348 INSP01308 110 aa8.98□□□□□ -0.97
RTFDC1-202ENST00000357348 NACAE9PAV3 2078 aa8.98□□□□□ -0.97
RTFDC1-202ENST00000357348 IGHV4-30-4P0DP06 118 aa8.97□□□□□ -0.97
RTFDC1-202ENST00000357348 HERVK_113P63121 156 aa8.97□□□□□ -0.97
RTFDC1-202ENST00000357348 COX6A2Q02221 97 aa8.97□□□□□ -0.97
RTFDC1-202ENST00000357348 C1orf158Q8N1D5 194 aa8.97□□□□□ -0.97
RTFDC1-202ENST00000357348 DAND5Q8N907 189 aa8.97□□□□□ -0.97
RTFDC1-202ENST00000357348 COPS9Q8WXC6 57 aa8.97□□□□□ -0.97
RTFDC1-202ENST00000357348 TRACP01848 142 aa8.97□□□□□ -0.97
RTFDC1-202ENST00000357348 LINC00242Q5T6M2 205 aa8.96□□□□□ -0.97
RTFDC1-202ENST00000357348 SOSTDC1Q6X4U4 206 aa8.96□□□□□ -0.97
RTFDC1-202ENST00000357348 EGFEM1PQ0D2K5 195 aa8.96□□□□□ -0.98
RTFDC1-202ENST00000357348 MEIG1Q5JSS6 88 aa8.96□□□□□ -0.98
RTFDC1-202ENST00000357348 Q9H8V8 135 aa8.96□□□□□ -0.98
RTFDC1-202ENST00000357348 CSDC2Q9Y534 153 aaKnown RBP8.96□□□□□ -0.98
RTFDC1-202ENST00000357348 ZNF625Q96I27 306 aaPredicted RBP8.95□□□□□ -0.98
RTFDC1-202ENST00000357348 IGHV3-38A0A0C4DH36 116 aa8.95□□□□□ -0.98
RTFDC1-202ENST00000357348 SMIM1B2RUZ4 78 aa8.95□□□□□ -0.98
RTFDC1-202ENST00000357348 FAM222AQ5U5X8 452 aa8.95□□□□□ -0.98
RTFDC1-202ENST00000357348 LINC00643Q86TS7 51 aa8.95□□□□□ -0.98
RTFDC1-202ENST00000357348 CHCHD5Q9BSY4 110 aa8.95□□□□□ -0.98
RTFDC1-202ENST00000357348 C22orf24Q9Y442 160 aa8.95□□□□□ -0.98
RTFDC1-202ENST00000357348 DNAH3Q8TD57 4116 aa8.94□□□□□ -0.98
RTFDC1-202ENST00000357348 DEFB135Q30KP9 77 aa8.94□□□□□ -0.98
RTFDC1-202ENST00000357348 TMEM126AQ9H061 195 aa8.94□□□□□ -0.98
RTFDC1-202ENST00000357348 CSNK1G2-AS1Q8NCQ2 148 aa8.93□□□□□ -0.98
RTFDC1-202ENST00000357348 SMCR5Q8TEV8 140 aa8.93□□□□□ -0.98
RTFDC1-202ENST00000357348 F5H768 121 aa8.92□□□□□ -0.98
RTFDC1-202ENST00000357348 HERV-K104P63124 156 aa8.92□□□□□ -0.98
RTFDC1-202ENST00000357348 IL17DQ8TAD2 202 aa8.92□□□□□ -0.98
RTFDC1-202ENST00000357348 DAZ2Q13117 558 aaKnown RBP8.92□□□□□ -0.98
RTFDC1-202ENST00000357348 DGAT2L7PQ6IED9 249 aa8.92□□□□□ -0.98
RTFDC1-202ENST00000357348 DAZ4Q86SG3 579 aaKnown RBP8.92□□□□□ -0.98
RTFDC1-202ENST00000357348 DAZ3Q9NR90 486 aaKnown RBP8.92□□□□□ -0.98
RTFDC1-202ENST00000357348 ATP5G1P05496 136 aa8.91□□□□□ -0.98
RTFDC1-202ENST00000357348 SMIM20Q8N5G0 67 aa8.91□□□□□ -0.98
RTFDC1-202ENST00000357348 CXCL5P42830 114 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms