RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 CLPSL2Q6UWE3 100 aa12.32□□□□□ -0.44
SMARCD3-202ENST00000356800 LINC00269Q8N2A0 174 aa12.32□□□□□ -0.44
SMARCD3-202ENST00000356800 TTTY13Q9BZ97 58 aa12.32□□□□□ -0.44
SMARCD3-202ENST00000356800 CDKN2A-AS1Q9UH64 79 aa12.32□□□□□ -0.44
SMARCD3-202ENST00000356800 KLK5Q9Y337 293 aaPredicted RBP12.32□□□□□ -0.44
SMARCD3-202ENST00000356800 LINC00959A0A1B0GUT2 108 aa12.31□□□□□ -0.44
SMARCD3-202ENST00000356800 LEPROTO15243 131 aa12.31□□□□□ -0.44
SMARCD3-202ENST00000356800 CCL25O15444 150 aa12.31□□□□□ -0.44
SMARCD3-202ENST00000356800 ZFAND6Q6FIF0 208 aa12.31□□□□□ -0.44
SMARCD3-202ENST00000356800 C2orf91Q6ZV80 131 aa12.31□□□□□ -0.44
SMARCD3-202ENST00000356800 IGHV1-58A0A0C4DH39 117 aa12.3□□□□□ -0.44
SMARCD3-202ENST00000356800 CTAG1AP78358 180 aa12.3□□□□□ -0.44
SMARCD3-202ENST00000356800 MAPKAPK5-AS1Q8N8E1 139 aa12.3□□□□□ -0.44
SMARCD3-202ENST00000356800 KLK12Q9UKR0 248 aa12.3□□□□□ -0.44
SMARCD3-202ENST00000356800 TENM2Q9NT68 2774 aa12.3□□□□□ -0.44
SMARCD3-202ENST00000356800 LYSTQ99698 3801 aa12.3□□□□□ -0.44
SMARCD3-202ENST00000356800 MYMXA0A1B0GTQ4 84 aa12.29□□□□□ -0.44
SMARCD3-202ENST00000356800 J3QQQ9 107 aa12.29□□□□□ -0.44
SMARCD3-202ENST00000356800 LINC01556Q5JQF7 62 aa12.29□□□□□ -0.44
SMARCD3-202ENST00000356800 PLEKHB2Q96CS7 222 aa12.29□□□□□ -0.44
SMARCD3-202ENST00000356800 REG3AQ06141 175 aa12.29□□□□□ -0.44
SMARCD3-202ENST00000356800 UPK3BQ9BT76 320 aa12.29□□□□□ -0.44
SMARCD3-202ENST00000356800 DNAH10OSP0CZ25 163 aa12.28□□□□□ -0.44
SMARCD3-202ENST00000356800 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
SMARCD3-202ENST00000356800 SS18Q15532 418 aa12.28□□□□□ -0.44
SMARCD3-202ENST00000356800 PRR34Q9NV39 138 aa12.28□□□□□ -0.44
SMARCD3-202ENST00000356800 IGHV3OR16-9A0A0B4J2B5 98 aa12.27□□□□□ -0.45
SMARCD3-202ENST00000356800 SPINK8P0C7L1 97 aa12.27□□□□□ -0.45
SMARCD3-202ENST00000356800 ENHOQ6UWT2 76 aa12.27□□□□□ -0.45
SMARCD3-202ENST00000356800 MUC7Q8TAX7 377 aa12.27□□□□□ -0.45
SMARCD3-202ENST00000356800 HIGD1BQ9P298 99 aa12.27□□□□□ -0.45
SMARCD3-202ENST00000356800 IGHV3-64A0A075B6Q5 118 aa12.26□□□□□ -0.45
SMARCD3-202ENST00000356800 TRAV8-3A0A0A6YYJ7 113 aa12.26□□□□□ -0.45
SMARCD3-202ENST00000356800 IGLV5-39A0A0G2JS06 123 aa12.26□□□□□ -0.45
SMARCD3-202ENST00000356800 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
SMARCD3-202ENST00000356800 ZNF815PA8K554 130 aa12.26□□□□□ -0.45
SMARCD3-202ENST00000356800 SMIM1B2RUZ4 78 aa12.25□□□□□ -0.45
SMARCD3-202ENST00000356800 WWC2-AS2Q96NR7 200 aa12.25□□□□□ -0.45
SMARCD3-202ENST00000356800 DNAH1Q9P2D7 4330 aa12.23□□□□□ -0.45
SMARCD3-202ENST00000356800 A0A087WZ39 114 aa12.23□□□□□ -0.45
SMARCD3-202ENST00000356800 M0R143 59 aa12.23□□□□□ -0.45
SMARCD3-202ENST00000356800 IGLV10-54A0A075B6I4 117 aa12.22□□□□□ -0.45
SMARCD3-202ENST00000356800 XCL1P47992 114 aa12.22□□□□□ -0.45
SMARCD3-202ENST00000356800 UBE2WQ96B02 151 aa12.22□□□□□ -0.45
SMARCD3-202ENST00000356800 SNHG12Q9BXW3 62 aa12.22□□□□□ -0.45
SMARCD3-202ENST00000356800 Q9H8V8 135 aa12.22□□□□□ -0.45
SMARCD3-202ENST00000356800 CD164L2Q6UWJ8 174 aa12.22□□□□□ -0.45
SMARCD3-202ENST00000356800 UBE2DNLQ8IWF7 75 aa12.22□□□□□ -0.45
SMARCD3-202ENST00000356800 CHCHD10Q8WYQ3 142 aaPredicted RBP12.22□□□□□ -0.45
SMARCD3-202ENST00000356800 VPS13DQ5THJ4 4388 aa12.21□□□□□ -0.45
SMARCD3-202ENST00000356800 LINC01561Q8N1V8 128 aa12.21□□□□□ -0.45
SMARCD3-202ENST00000356800 CRPP02741 224 aa12.19□□□□□ -0.46
SMARCD3-202ENST00000356800 HSD52Q0P140 79 aa12.19□□□□□ -0.46
SMARCD3-202ENST00000356800 SCGB1D4Q6XE38 83 aa12.19□□□□□ -0.46
SMARCD3-202ENST00000356800 C5orf38Q86SI9 138 aa12.19□□□□□ -0.46
SMARCD3-202ENST00000356800 NDUFA12Q9UI09 145 aa12.19□□□□□ -0.46
SMARCD3-202ENST00000356800 TRAV8-4A0A0B4J246 113 aa12.18□□□□□ -0.46
SMARCD3-202ENST00000356800 EREGO14944 169 aa12.18□□□□□ -0.46
SMARCD3-202ENST00000356800 HINT1P49773 126 aaPredicted RBP12.18□□□□□ -0.46
SMARCD3-202ENST00000356800 MIAQ16674 131 aa12.18□□□□□ -0.46
SMARCD3-202ENST00000356800 FOXI1Q12951 378 aa12.17□□□□□ -0.46
SMARCD3-202ENST00000356800 KRTAP26-1Q6PEX3 210 aa12.17□□□□□ -0.46
SMARCD3-202ENST00000356800 C10orf126Q8N4M7 172 aa12.17□□□□□ -0.46
SMARCD3-202ENST00000356800 IBA57-AS1B1ANH7 110 aa12.16□□□□□ -0.46
SMARCD3-202ENST00000356800 TAL2Q16559 108 aa12.16□□□□□ -0.46
SMARCD3-202ENST00000356800 LBHQ53QV2 105 aaPredicted RBP12.16□□□□□ -0.46
SMARCD3-202ENST00000356800 BVES-AS1Q5T3Y7 98 aa12.16□□□□□ -0.46
SMARCD3-202ENST00000356800 GAGE12HA6NDE8 117 aa12.16□□□□□ -0.46
SMARCD3-202ENST00000356800 NDUFA1O15239 70 aa12.16□□□□□ -0.46
SMARCD3-202ENST00000356800 KRTAP1-5Q9BYS1 174 aa12.16□□□□□ -0.46
SMARCD3-202ENST00000356800 COX7A2LO14548 114 aa12.15□□□□□ -0.46
SMARCD3-202ENST00000356800 A0A0J9YXY3 114 aa12.14□□□□□ -0.47
SMARCD3-202ENST00000356800 CASC10Q5T4H9 136 aa12.14□□□□□ -0.47
SMARCD3-202ENST00000356800 COX7B2Q8TF08 81 aa12.14□□□□□ -0.47
SMARCD3-202ENST00000356800 BATFQ16520 125 aa12.13□□□□□ -0.47
SMARCD3-202ENST00000356800 ZNF625Q96I27 306 aaPredicted RBP12.13□□□□□ -0.47
SMARCD3-202ENST00000356800 Q9HAA7 133 aa12.13□□□□□ -0.47
SMARCD3-202ENST00000356800 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
SMARCD3-202ENST00000356800 HIST1H4GQ99525 98 aa12.13□□□□□ -0.47
SMARCD3-202ENST00000356800 TM2D2Q9BX73 214 aa12.12□□□□□ -0.47
SMARCD3-202ENST00000356800 K7EP13 123 aa12.11□□□□□ -0.47
SMARCD3-202ENST00000356800 CEND1Q8N111 149 aa12.11□□□□□ -0.47
SMARCD3-202ENST00000356800 C1orf43Q9BWL3 253 aa12.11□□□□□ -0.47
SMARCD3-202ENST00000356800 IGKV2D-24A0A075B6R9 120 aa12.1□□□□□ -0.47
SMARCD3-202ENST00000356800 TMEM238C9JI98 176 aa12.1□□□□□ -0.47
SMARCD3-202ENST00000356800 MALP21145 153 aa12.1□□□□□ -0.47
SMARCD3-202ENST00000356800 HERV-K104P63124 156 aa12.1□□□□□ -0.47
SMARCD3-202ENST00000356800 SFTA2Q6UW10 78 aa12.1□□□□□ -0.47
SMARCD3-202ENST00000356800 Q8IZM0 81 aa12.1□□□□□ -0.47
SMARCD3-202ENST00000356800 ORAOV1Q8WV07 137 aa12.1□□□□□ -0.47
SMARCD3-202ENST00000356800 TIMM17BO60830 172 aa12.1□□□□□ -0.47
SMARCD3-202ENST00000356800 LITAFQ99732 161 aa12.1□□□□□ -0.47
SMARCD3-202ENST00000356800 TOMM7Q9P0U1 55 aa12.1□□□□□ -0.47
SMARCD3-202ENST00000356800 C3orf84H3BNL1 204 aa12.09□□□□□ -0.47
SMARCD3-202ENST00000356800 GCSHP23434 173 aa12.09□□□□□ -0.47
SMARCD3-202ENST00000356800 SRSF9Q13242 221 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMARCD3-202ENST00000356800 COL5A1-AS1Q5SY13 56 aa12.09□□□□□ -0.47
SMARCD3-202ENST00000356800 APOMO95445 188 aa12.07□□□□□ -0.48
SMARCD3-202ENST00000356800 C6orf226Q5I0X4 101 aa12.07□□□□□ -0.48
SMARCD3-202ENST00000356800 NBDYA0A0U1RRE5 68 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms