RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 LINC00959A0A1B0GUT2 108 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 OTOGLQ3ZCN5 2332 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.07□□□□□ -1.76
PTPRD-202ENST00000356435 DYSFO75923 2080 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 FREM1Q5H8C1 2179 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 ESRGQ1W209 222 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 Q6JHZ5 121 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 Q6ZQY7 126 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 C20orf197Q8N268 126 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 C2orf16Q68DN1 1984 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 WNK1Q9H4A3 2382 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 MRPS36P82909 103 aaKnown RBP4.07□□□□□ -1.76
PTPRD-202ENST00000356435 LST1O00453 97 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 IGLV2-11P01706 119 aa4.07□□□□□ -1.76
PTPRD-202ENST00000356435 ARHGAP32A7KAX9 2087 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 F8WDY8 70 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 Q8IZM0 81 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 KIAA1549Q9HCM3 1950 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 A0A096LNJ9 63 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 IGLV1-40P01703 118 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 CIRBP-AS1Q8TBR5 109 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 LIMD2Q9BT23 127 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 ARHGAP21Q5T5U3 1957 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 WFDC10AQ9H1F0 79 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 UQCRQO14949 82 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 TSHBP01222 138 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 IMUPQ9GZP8 106 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 TRIAP1O43715 76 aa4.06□□□□□ -1.76
PTPRD-202ENST00000356435 EGFEM1PQ0D2K5 195 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 C1orf137Q5JT78 98 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 PCNX3Q9H6A9 2034 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 A6NED7 52 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 LINC00337Q8N6G1 96 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 TRBV27A0A0K0K1C4 114 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 NDUFV3P56181 108 aaKnown RBP4.05□□□□□ -1.76
PTPRD-202ENST00000356435 Q8N6K4 173 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 IGHV6-1A0A0B4J1U7 121 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 LOC100131303A0A0U1RQF7 123 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 NHLRC4P0CG21 123 aaPredicted RBP4.05□□□□□ -1.76
PTPRD-202ENST00000356435 OXLD1Q5BKU9 147 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 LINC00526Q96FQ7 95 aa4.05□□□□□ -1.76
PTPRD-202ENST00000356435 NAV3Q8IVL0 2385 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 RETNQ9HD89 108 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 KLLNB2CW77 178 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 C18orf65Q6ZTR6 163 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 X6R8D5 127 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 PROK1P58294 105 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 PRO0461Q9UI25 63 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 CSPG4Q6UVK1 2322 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 CEP192Q8TEP8 1941 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 CYSRT1A8MQ03 144 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 MED13LQ71F56 2210 aa4.04□□□□□ -1.76
PTPRD-202ENST00000356435 LINC01556Q5JQF7 62 aa4.03□□□□□ -1.76
PTPRD-202ENST00000356435 C16orf95Q9H693 158 aa4.03□□□□□ -1.76
PTPRD-202ENST00000356435 TNCP24821 2201 aa4.03□□□□□ -1.76
PTPRD-202ENST00000356435 RNF185Q96GF1 192 aa4.02□□□□□ -1.77
PTPRD-202ENST00000356435 XGP55808 180 aa4.02□□□□□ -1.77
PTPRD-202ENST00000356435 FAM30AQ9NZY2 134 aa4.02□□□□□ -1.77
PTPRD-202ENST00000356435 SORL1Q92673 2214 aa4.02□□□□□ -1.77
PTPRD-202ENST00000356435 SBSPONQ8IVN8 264 aa4.02□□□□□ -1.77
PTPRD-202ENST00000356435 Q9BRP9 147 aa4.02□□□□□ -1.77
PTPRD-202ENST00000356435 RNASE3P12724 160 aaKnown RBP4.01□□□□□ -1.77
PTPRD-202ENST00000356435 C6orf223Q8N319 242 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 C1orf229Q6ZS94 237 aaPredicted RBP4.01□□□□□ -1.77
PTPRD-202ENST00000356435 C22orf34Q6ZV56 151 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 SMR3AQ99954 134 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 IGLV1-51P01701 117 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 MT-ATP8P03928 68 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 SNURFQ9Y675 71 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 MED13Q9UHV7 2174 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 SMIM11BQ8TCY0 68 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 RETNLBQ9BQ08 111 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 CDIP1Q9H305 208 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 PRR9Q5T870 116 aa4.01□□□□□ -1.77
PTPRD-202ENST00000356435 TRBV7-6A0A0J9YX20 115 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 C2orf48Q96LS8 159 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 LINC01600Q96MT4 127 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 LRP4O75096 1905 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 PRR4Q16378 134 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 BRI3O95415 125 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 A8MZ25 164 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 Q6ZTC4 211 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 PRO3102Q9H379 93 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 CDC42SE2Q9NRR3 84 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 TRBV10-3A0A0K0K1G6 114 aa4□□□□□ -1.77
PTPRD-202ENST00000356435 CSDC2Q9Y534 153 aaKnown RBP4□□□□□ -1.77
PTPRD-202ENST00000356435 AGRNO00468 2067 aa3.99□□□□□ -1.77
PTPRD-202ENST00000356435 MRPS12O15235 138 aaKnown RBP3.99□□□□□ -1.77
PTPRD-202ENST00000356435 NRACQ8N912 160 aa3.99□□□□□ -1.77
PTPRD-202ENST00000356435 ODF3L2Q3SX64 289 aa3.99□□□□□ -1.77
PTPRD-202ENST00000356435 EXPH5Q8NEV8 1989 aa3.99□□□□□ -1.77
PTPRD-202ENST00000356435 WIPF1O43516 503 aa3.99□□□□□ -1.77
PTPRD-202ENST00000356435 UNQ6190/PRO20217Q6UXQ8 127 aa3.99□□□□□ -1.77
PTPRD-202ENST00000356435 NTM-AS1Q6ZSK4 140 aa3.99□□□□□ -1.77
PTPRD-202ENST00000356435 Q8N2B8 174 aa3.99□□□□□ -1.77
PTPRD-202ENST00000356435 SPINK1P00995 79 aa3.98□□□□□ -1.77
PTPRD-202ENST00000356435 Q8N814 137 aa3.98□□□□□ -1.77
PTPRD-202ENST00000356435 A0A0U1RQV1 116 aa3.98□□□□□ -1.77
PTPRD-202ENST00000356435 ZNF580Q9UK33 172 aa3.98□□□□□ -1.77
PTPRD-202ENST00000356435 CRIP1P50238 77 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms