RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 NPC2P61916 151 aa12.44□□□□□ -0.42
NPAS3-202ENST00000356141 CLPSL2Q6UWE3 100 aa12.44□□□□□ -0.42
NPAS3-202ENST00000356141 GYPEP15421 78 aa12.43□□□□□ -0.42
NPAS3-202ENST00000356141 COX6A2Q02221 97 aa12.43□□□□□ -0.42
NPAS3-202ENST00000356141 UBE2D3P61077 147 aa12.43□□□□□ -0.42
NPAS3-202ENST00000356141 UBE2D2P62837 147 aa12.43□□□□□ -0.42
NPAS3-202ENST00000356141 PRO0461Q9UI25 63 aa12.42□□□□□ -0.42
NPAS3-202ENST00000356141 SRSF9Q13242 221 aaKnown RBP eCLIP12.42□□□□□ -0.42
NPAS3-202ENST00000356141 ZNF625Q96I27 306 aaPredicted RBP12.42□□□□□ -0.42
NPAS3-202ENST00000356141 CHCHD5Q9BSY4 110 aa12.42□□□□□ -0.42
NPAS3-202ENST00000356141 UBE2L6O14933 153 aa12.41□□□□□ -0.42
NPAS3-202ENST00000356141 PIK3CD-AS1Q5SR53 167 aa12.41□□□□□ -0.42
NPAS3-202ENST00000356141 HERVK_113P61574 105 aa12.41□□□□□ -0.42
NPAS3-202ENST00000356141 Q8N3U1 123 aa12.41□□□□□ -0.42
NPAS3-202ENST00000356141 DNAJC30Q96LL9 226 aa12.41□□□□□ -0.42
NPAS3-202ENST00000356141 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
NPAS3-202ENST00000356141 J3QQQ9 107 aa12.4□□□□□ -0.42
NPAS3-202ENST00000356141 ZNF561-AS1K7EIQ3 104 aa12.4□□□□□ -0.42
NPAS3-202ENST00000356141 LGALS3P17931 250 aaKnown RBP12.4□□□□□ -0.42
NPAS3-202ENST00000356141 CDKN2A-AS1Q9UH64 79 aa12.4□□□□□ -0.42
NPAS3-202ENST00000356141 NDUFV3P56181 108 aaKnown RBP12.39□□□□□ -0.43
NPAS3-202ENST00000356141 MEIG1Q5JSS6 88 aa12.39□□□□□ -0.43
NPAS3-202ENST00000356141 EDA2RQ9HAV5 297 aa12.39□□□□□ -0.43
NPAS3-202ENST00000356141 TMEM262E9PQX1 116 aa12.39□□□□□ -0.43
NPAS3-202ENST00000356141 TTC32Q5I0X7 151 aa12.39□□□□□ -0.43
NPAS3-202ENST00000356141 KIR2DL5BQ8NHK3 375 aa12.39□□□□□ -0.43
NPAS3-202ENST00000356141 LOC107984640A0A0U1RRK4 108 aa12.38□□□□□ -0.43
NPAS3-202ENST00000356141 TMEM223A0PJW6 202 aa12.38□□□□□ -0.43
NPAS3-202ENST00000356141 CEND1Q8N111 149 aa12.38□□□□□ -0.43
NPAS3-202ENST00000356141 IGLV4-60A0A075B6I1 120 aa12.38□□□□□ -0.43
NPAS3-202ENST00000356141 WFDC9Q8NEX5 89 aa12.38□□□□□ -0.43
NPAS3-202ENST00000356141 AMELXQ99217 191 aa12.38□□□□□ -0.43
NPAS3-202ENST00000356141 APOC4P55056 127 aa12.37□□□□□ -0.43
NPAS3-202ENST00000356141 GAGE2BQ13066 116 aa12.37□□□□□ -0.43
NPAS3-202ENST00000356141 GAGE2EQ4V326 116 aa12.37□□□□□ -0.43
NPAS3-202ENST00000356141 DAND5Q8N907 189 aa12.37□□□□□ -0.43
NPAS3-202ENST00000356141 GAGE2DQ9UEU5 116 aa12.37□□□□□ -0.43
NPAS3-202ENST00000356141 IGHV3-30-3P0DP02 117 aa12.36□□□□□ -0.43
NPAS3-202ENST00000356141 DAD1P61803 113 aa12.36□□□□□ -0.43
NPAS3-202ENST00000356141 DAZ4Q86SG3 579 aaKnown RBP12.36□□□□□ -0.43
NPAS3-202ENST00000356141 TMEM243Q9BU79 118 aa12.36□□□□□ -0.43
NPAS3-202ENST00000356141 TIMM21Q9BVV7 248 aa12.36□□□□□ -0.43
NPAS3-202ENST00000356141 DAZ3Q9NR90 486 aaKnown RBP12.36□□□□□ -0.43
NPAS3-202ENST00000356141 TRBV10-1A0A0K0K1A3 114 aa12.35□□□□□ -0.43
NPAS3-202ENST00000356141 C12orf74Q32Q52 190 aa12.35□□□□□ -0.43
NPAS3-202ENST00000356141 SPANXA1Q9NS26 97 aa12.35□□□□□ -0.43
NPAS3-202ENST00000356141 SMCPP49901 116 aaPredicted RBP12.35□□□□□ -0.43
NPAS3-202ENST00000356141 MRAPQ8TCY5 172 aa12.35□□□□□ -0.43
NPAS3-202ENST00000356141 PYGO1Q9Y3Y4 419 aa12.35□□□□□ -0.43
NPAS3-202ENST00000356141 TRBV6-4A0A1B0GX49 114 aa12.34□□□□□ -0.43
NPAS3-202ENST00000356141 PAX4O43316 350 aa12.34□□□□□ -0.43
NPAS3-202ENST00000356141 PAPPA-AS1Q5QFB9 102 aa12.34□□□□□ -0.43
NPAS3-202ENST00000356141 IFITM1P13164 125 aa12.33□□□□□ -0.44
NPAS3-202ENST00000356141 UBE2D1P51668 147 aa12.33□□□□□ -0.44
NPAS3-202ENST00000356141 C11orf68Q9H3H3 251 aaKnown RBP12.33□□□□□ -0.44
NPAS3-202ENST00000356141 CARD19Q96LW7 228 aa12.33□□□□□ -0.44
NPAS3-202ENST00000356141 H7C2G1 150 aa12.32□□□□□ -0.44
NPAS3-202ENST00000356141 PSMB2P49721 201 aa12.32□□□□□ -0.44
NPAS3-202ENST00000356141 MRPS36P82909 103 aaKnown RBP12.32□□□□□ -0.44
NPAS3-202ENST00000356141 C10orf126Q8N4M7 172 aa12.32□□□□□ -0.44
NPAS3-202ENST00000356141 Q8NAQ8 132 aa12.32□□□□□ -0.44
NPAS3-202ENST00000356141 LINC01549A6NIU2 74 aa12.32□□□□□ -0.44
NPAS3-202ENST00000356141 SNCGO76070 127 aa12.32□□□□□ -0.44
NPAS3-202ENST00000356141 PRSS2P07478 247 aa12.32□□□□□ -0.44
NPAS3-202ENST00000356141 LINC00242Q5T6M2 205 aa12.32□□□□□ -0.44
NPAS3-202ENST00000356141 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
NPAS3-202ENST00000356141 HIGD1BQ9P298 99 aa12.32□□□□□ -0.44
NPAS3-202ENST00000356141 TRBV6-8A0A0A6YYG3 113 aa12.31□□□□□ -0.44
NPAS3-202ENST00000356141 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
NPAS3-202ENST00000356141 C4orf48Q5BLP8 95 aa12.31□□□□□ -0.44
NPAS3-202ENST00000356141 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
NPAS3-202ENST00000356141 PPDPFLQ8WWR9 84 aa12.31□□□□□ -0.44
NPAS3-202ENST00000356141 TOMM7Q9P0U1 55 aa12.31□□□□□ -0.44
NPAS3-202ENST00000356141 CDC42SE2Q9NRR3 84 aa12.3□□□□□ -0.44
NPAS3-202ENST00000356141 LEPROTO15243 131 aa12.3□□□□□ -0.44
NPAS3-202ENST00000356141 TMEM101Q96IK0 257 aa12.3□□□□□ -0.44
NPAS3-202ENST00000356141 VSIG2Q96IQ7 327 aa12.3□□□□□ -0.44
NPAS3-202ENST00000356141 IGLV10-54A0A075B6I4 117 aa12.29□□□□□ -0.44
NPAS3-202ENST00000356141 SBSPONQ8IVN8 264 aa12.29□□□□□ -0.44
NPAS3-202ENST00000356141 PRO0255Q9UI72 69 aa12.29□□□□□ -0.44
NPAS3-202ENST00000356141 NDUFA12Q9UI09 145 aa12.29□□□□□ -0.44
NPAS3-202ENST00000356141 FAM19A5Q7Z5A7 132 aaPredicted RBP12.28□□□□□ -0.44
NPAS3-202ENST00000356141 C5orf38Q86SI9 138 aa12.28□□□□□ -0.44
NPAS3-202ENST00000356141 TINCRA0A1B0GVN0 87 aa12.27□□□□□ -0.44
NPAS3-202ENST00000356141 ADAMTSL4-AS1Q5T5F5 129 aa12.27□□□□□ -0.45
NPAS3-202ENST00000356141 EIF4EBP3O60516 100 aaPredicted RBP12.26□□□□□ -0.45
NPAS3-202ENST00000356141 DEFB121Q5J5C9 76 aa12.26□□□□□ -0.45
NPAS3-202ENST00000356141 IGHV1-58A0A0C4DH39 117 aa12.26□□□□□ -0.45
NPAS3-202ENST00000356141 XCL1P47992 114 aa12.26□□□□□ -0.45
NPAS3-202ENST00000356141 A0A0J9YXY3 114 aa12.25□□□□□ -0.45
NPAS3-202ENST00000356141 TEN1Q86WV5 123 aa12.25□□□□□ -0.45
NPAS3-202ENST00000356141 TMEM126AQ9H061 195 aa12.25□□□□□ -0.45
NPAS3-202ENST00000356141 MUSTN1Q8IVN3 82 aa12.24□□□□□ -0.45
NPAS3-202ENST00000356141 MDFIQ99750 246 aa12.24□□□□□ -0.45
NPAS3-202ENST00000356141 V9GYY9 64 aa12.24□□□□□ -0.45
NPAS3-202ENST00000356141 ATP5G1P05496 136 aa12.24□□□□□ -0.45
NPAS3-202ENST00000356141 SPART-AS1P0CW21 52 aa12.24□□□□□ -0.45
NPAS3-202ENST00000356141 LYRM9A8MSI8 78 aa12.23□□□□□ -0.45
NPAS3-202ENST00000356141 LINC00612Q8N6U2 182 aa12.23□□□□□ -0.45
NPAS3-202ENST00000356141 Q9H8V8 135 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms