RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 G3V4G9 280 aa8.26□□□□□ -1.09
FN1-204ENST00000356005 PLAC8L1A1L4L8 177 aa8.25□□□□□ -1.09
FN1-204ENST00000356005 AVPP01185 164 aa8.25□□□□□ -1.09
FN1-204ENST00000356005 UBE2D2P62837 147 aa8.25□□□□□ -1.09
FN1-204ENST00000356005 BRWD1-AS2P59051 145 aa8.25□□□□□ -1.09
FN1-204ENST00000356005 ANKRD39Q53RE8 183 aa8.25□□□□□ -1.09
FN1-204ENST00000356005 TMEM223A0PJW6 202 aa8.25□□□□□ -1.09
FN1-204ENST00000356005 USP17L23D6RBM5 183 aa8.24□□□□□ -1.09
FN1-204ENST00000356005 C10orf25Q5T742 122 aa8.24□□□□□ -1.09
FN1-204ENST00000356005 C1orf229Q6ZS94 237 aaPredicted RBP8.24□□□□□ -1.09
FN1-204ENST00000356005 XAGE1AQ9HD64 81 aa8.24□□□□□ -1.09
FN1-204ENST00000356005 LINC00959A0A1B0GUT2 108 aa8.23□□□□□ -1.09
FN1-204ENST00000356005 K7ERS5 55 aa8.23□□□□□ -1.09
FN1-204ENST00000356005 Q8IZM0 81 aa8.23□□□□□ -1.09
FN1-204ENST00000356005 A0A096LNI7 61 aa8.23□□□□□ -1.09
FN1-204ENST00000356005 RNASE3P12724 160 aaKnown RBP8.22□□□□□ -1.09
FN1-204ENST00000356005 CLEC2BQ92478 149 aa8.22□□□□□ -1.09
FN1-204ENST00000356005 IGKV2-28A0A075B6P5 120 aa8.22□□□□□ -1.09
FN1-204ENST00000356005 IGKV3D-7A0A0C4DH55 119 aa8.22□□□□□ -1.09
FN1-204ENST00000356005 IGKV2D-28P01615 120 aa8.22□□□□□ -1.09
FN1-204ENST00000356005 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.09
FN1-204ENST00000356005 FOXI1Q12951 378 aa8.21□□□□□ -1.09
FN1-204ENST00000356005 LINC00308Q8TCZ7 52 aa8.2□□□□□ -1.1
FN1-204ENST00000356005 CRIP1P50238 77 aa8.2□□□□□ -1.1
FN1-204ENST00000356005 C5orf47Q569G3 176 aa8.2□□□□□ -1.1
FN1-204ENST00000356005 ATP5EP2Q5VTU8 51 aa8.2□□□□□ -1.1
FN1-204ENST00000356005 BPTFQ12830 3046 aa8.2□□□□□ -1.1
FN1-204ENST00000356005 FXYD2P54710 66 aa8.2□□□□□ -1.1
FN1-204ENST00000356005 ODF3L2Q3SX64 289 aa8.19□□□□□ -1.1
FN1-204ENST00000356005 CDPF1Q6NVV7 123 aa8.19□□□□□ -1.1
FN1-204ENST00000356005 TSHBP01222 138 aa8.19□□□□□ -1.1
FN1-204ENST00000356005 Q6ZPA2 131 aa8.19□□□□□ -1.1
FN1-204ENST00000356005 PROK1P58294 105 aa8.19□□□□□ -1.1
FN1-204ENST00000356005 CRIP3Q6Q6R5 217 aa8.19□□□□□ -1.1
FN1-204ENST00000356005 IGLV2-8P01709 118 aa8.19□□□□□ -1.1
FN1-204ENST00000356005 ZNF22P17026 224 aaPredicted RBP8.19□□□□□ -1.1
FN1-204ENST00000356005 Q6ZTC4 211 aa8.19□□□□□ -1.1
FN1-204ENST00000356005 M0QXV9 152 aa8.19□□□□□ -1.1
FN1-204ENST00000356005 EGFEM1PQ0D2K5 195 aa8.18□□□□□ -1.1
FN1-204ENST00000356005 LOC100131303A0A0U1RQF7 123 aa8.18□□□□□ -1.1
FN1-204ENST00000356005 FHL3Q13643 280 aa8.18□□□□□ -1.1
FN1-204ENST00000356005 IGLV9-49A0A0B4J1Y8 123 aa8.17□□□□□ -1.1
FN1-204ENST00000356005 USP24Q9UPU5 2620 aa8.17□□□□□ -1.1
FN1-204ENST00000356005 SPINK6Q6UWN8 80 aa8.17□□□□□ -1.1
FN1-204ENST00000356005 PRR15LQ9BU68 103 aa8.17□□□□□ -1.1
FN1-204ENST00000356005 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
FN1-204ENST00000356005 NRACQ8N912 160 aa8.17□□□□□ -1.1
FN1-204ENST00000356005 SPTSSBQ8NFR3 76 aa8.17□□□□□ -1.1
FN1-204ENST00000356005 CDC42SE2Q9NRR3 84 aa8.17□□□□□ -1.1
FN1-204ENST00000356005 PLA2G2EQ9NZK7 142 aa8.17□□□□□ -1.1
FN1-204ENST00000356005 RETNQ9HD89 108 aa8.17□□□□□ -1.1
FN1-204ENST00000356005 RNF185Q96GF1 192 aa8.16□□□□□ -1.1
FN1-204ENST00000356005 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
FN1-204ENST00000356005 C6orf99Q4VX62 202 aa8.16□□□□□ -1.1
FN1-204ENST00000356005 CNFNQ9BYD5 112 aa8.16□□□□□ -1.1
FN1-204ENST00000356005 CCKP06307 115 aa8.16□□□□□ -1.1
FN1-204ENST00000356005 PRRC2CQ9Y520 2896 aaKnown RBP8.16□□□□□ -1.1
FN1-204ENST00000356005 IGLV2-11P01706 119 aa8.15□□□□□ -1.1
FN1-204ENST00000356005 LINC00643Q86TS7 51 aa8.15□□□□□ -1.1
FN1-204ENST00000356005 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.15□□□□□ -1.1
FN1-204ENST00000356005 RPL37AP8A6NKH3 93 aa8.15□□□□□ -1.11
FN1-204ENST00000356005 Q8N2B8 174 aa8.14□□□□□ -1.11
FN1-204ENST00000356005 CYSRT1A8MQ03 144 aa8.14□□□□□ -1.11
FN1-204ENST00000356005 CIRBP-AS1Q8TBR5 109 aa8.14□□□□□ -1.11
FN1-204ENST00000356005 RNASE8Q8TDE3 154 aaKnown RBP8.14□□□□□ -1.11
FN1-204ENST00000356005 FAM236AA0A1B0GUQ0 79 aa8.14□□□□□ -1.11
FN1-204ENST00000356005 FAM236BA0A1B0GV22 79 aa8.14□□□□□ -1.11
FN1-204ENST00000356005 CSDC2Q9Y534 153 aaKnown RBP8.14□□□□□ -1.11
FN1-204ENST00000356005 A0A1B0GUV1 79 aa8.14□□□□□ -1.11
FN1-204ENST00000356005 DNAH12Q6ZR08 3092 aa8.13□□□□□ -1.11
FN1-204ENST00000356005 HRCT1Q6UXD1 115 aa8.13□□□□□ -1.11
FN1-204ENST00000356005 WFDC10BQ8IUB3 73 aa8.13□□□□□ -1.11
FN1-204ENST00000356005 PPDPFQ9H3Y8 114 aa8.13□□□□□ -1.11
FN1-204ENST00000356005 POLR2KP53803 58 aaKnown RBP8.12□□□□□ -1.11
FN1-204ENST00000356005 PTH2Q96A98 100 aa8.12□□□□□ -1.11
FN1-204ENST00000356005 ZNF73O43830 326 aaPredicted RBP8.12□□□□□ -1.11
FN1-204ENST00000356005 LIMD2Q9BT23 127 aa8.12□□□□□ -1.11
FN1-204ENST00000356005 FHL2Q14192 279 aa8.12□□□□□ -1.11
FN1-204ENST00000356005 LINC01561Q8N1V8 128 aa8.12□□□□□ -1.11
FN1-204ENST00000356005 C2orf48Q96LS8 159 aa8.12□□□□□ -1.11
FN1-204ENST00000356005 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
FN1-204ENST00000356005 A0A1W2PPR1 153 aa8.11□□□□□ -1.11
FN1-204ENST00000356005 NUPR1O60356 82 aa8.11□□□□□ -1.11
FN1-204ENST00000356005 NDUFC2-KCTD14E9PQ53 114 aa8.11□□□□□ -1.11
FN1-204ENST00000356005 LINC01556Q5JQF7 62 aa8.1□□□□□ -1.11
FN1-204ENST00000356005 PRR9Q5T870 116 aa8.1□□□□□ -1.11
FN1-204ENST00000356005 Q6JHZ5 121 aa8.1□□□□□ -1.11
FN1-204ENST00000356005 SERP1Q9Y6X1 66 aa8.1□□□□□ -1.11
FN1-204ENST00000356005 PRYO14603 147 aa8.09□□□□□ -1.11
FN1-204ENST00000356005 MRPL55Q7Z7F7 128 aaKnown RBP8.09□□□□□ -1.11
FN1-204ENST00000356005 NDUFC2O95298 119 aa8.09□□□□□ -1.11
FN1-204ENST00000356005 C1orf137Q5JT78 98 aa8.09□□□□□ -1.11
FN1-204ENST00000356005 C6orf223Q8N319 242 aa8.09□□□□□ -1.11
FN1-204ENST00000356005 LYPD5Q6UWN5 251 aa8.09□□□□□ -1.11
FN1-204ENST00000356005 LINC00526Q96FQ7 95 aa8.08□□□□□ -1.12
FN1-204ENST00000356005 C3orf84H3BNL1 204 aa8.08□□□□□ -1.12
FN1-204ENST00000356005 WFDC2Q14508 124 aa8.08□□□□□ -1.12
FN1-204ENST00000356005 BEAN1Q3B7T3 259 aa8.08□□□□□ -1.12
FN1-204ENST00000356005 TP73-AS1Q9UF72 201 aa8.08□□□□□ -1.12
FN1-204ENST00000356005 TEX49A0A1B0GTD5 131 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms