RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 GDF5OSQ5U4N7 250 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 SMIM11BQ8TCY0 68 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 PRORYQ9H606 182 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 RBX1P62877 108 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 Q6ZSR3 168 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 IMUPQ9GZP8 106 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 POM121L12Q8N7R1 296 aa4.29□□□□□ -1.72
SRGAP1-201ENST00000355086 ABCA12Q86UK0 2595 aa4.28□□□□□ -1.72
SRGAP1-201ENST00000355086 TRBV7-6A0A0J9YX20 115 aa4.28□□□□□ -1.72
SRGAP1-201ENST00000355086 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
SRGAP1-201ENST00000355086 PIEZO1Q92508 2521 aa4.28□□□□□ -1.72
SRGAP1-201ENST00000355086 ZNF843Q8N446 348 aa4.28□□□□□ -1.72
SRGAP1-201ENST00000355086 LINC00959A0A1B0GUT2 108 aa4.28□□□□□ -1.73
SRGAP1-201ENST00000355086 NANOS2P60321 138 aaKnown RBP4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 Q8NA96 180 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 IGLV5-52A0A0A0MRZ9 124 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 M0QXV9 152 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 LY6G6DO95868 133 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 MAPKAPK5-AS1Q8N8E1 139 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 FSHBP01225 129 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 ALPK3Q96L96 1907 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 CELA1Q9UNI1 258 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 IGLV2-8P01709 118 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 PYGO1Q9Y3Y4 419 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 CRIP1P50238 77 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 ZNF73O43830 326 aaPredicted RBP4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 RNF185Q96GF1 192 aa4.27□□□□□ -1.73
SRGAP1-201ENST00000355086 LST1O00453 97 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 PMAIP1Q13794 54 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 A8MZ25 164 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 C19orf84I3L1E1 186 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 EBI3Q14213 229 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 LINC00208Q96KT6 92 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 SETD2Q9BYW2 2564 aaPredicted RBP4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 NUP210LQ5VU65 1888 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 IGHV6-1A0A0B4J1U7 121 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 Q6Q795 121 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 TSHBP01222 138 aa4.26□□□□□ -1.73
SRGAP1-201ENST00000355086 COX7CP15954 63 aa4.25□□□□□ -1.73
SRGAP1-201ENST00000355086 MSMPQ1L6U9 139 aa4.25□□□□□ -1.73
SRGAP1-201ENST00000355086 REG3GQ6UW15 175 aa4.25□□□□□ -1.73
SRGAP1-201ENST00000355086 U3KQK5 164 aa4.25□□□□□ -1.73
SRGAP1-201ENST00000355086 NCOR2Q9Y618 2525 aa4.25□□□□□ -1.73
SRGAP1-201ENST00000355086 Q8IZM0 81 aa4.25□□□□□ -1.73
SRGAP1-201ENST00000355086 C1orf137Q5JT78 98 aa4.25□□□□□ -1.73
SRGAP1-201ENST00000355086 LINC01547P58512 204 aaPredicted RBP4.25□□□□□ -1.73
SRGAP1-201ENST00000355086 MRGPRG-AS1Q2M3A8 158 aa4.25□□□□□ -1.73
SRGAP1-201ENST00000355086 LINC01556Q5JQF7 62 aa4.25□□□□□ -1.73
SRGAP1-201ENST00000355086 CYSRT1A8MQ03 144 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 SPINK1P00995 79 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 SRCAPQ6ZRS2 3230 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 PRM2P04554 102 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 LINC00574Q9H8X3 128 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 A0A1W2PNU3 283 aaPredicted RBP4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 MBD6Q96DN6 1003 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 MUC7Q8TAX7 377 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 C10orf99Q6UWK7 81 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 PCOTHQ58A44 107 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 SOSTDC1Q6X4U4 206 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 LINC01006Q8NI28 216 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 PKD1L2Q7Z442 2459 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 ZNF702PQ9H963 129 aa4.24□□□□□ -1.73
SRGAP1-201ENST00000355086 NRACQ8N912 160 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 PLA2G5P39877 138 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 CCDC179H3BU77 68 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 Q9BRP9 147 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 PSMG3-AS1Q96PY0 264 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 NTM-AS1Q6ZSK4 140 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 C18orf65Q6ZTR6 163 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 RAI1Q7Z5J4 1906 aaPredicted RBP4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 PLA2G1BP04054 148 aaKnown RBP4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 OXLD1Q5BKU9 147 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 CDC42SE2Q9NRR3 84 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 TP73-AS1Q9UF72 201 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 IGLV2-11P01706 119 aa4.23□□□□□ -1.73
SRGAP1-201ENST00000355086 Q6ZS46 218 aa4.22□□□□□ -1.73
SRGAP1-201ENST00000355086 LINC00694P0DN24 101 aa4.22□□□□□ -1.73
SRGAP1-201ENST00000355086 WISP2O76076 250 aa4.22□□□□□ -1.73
SRGAP1-201ENST00000355086 CRYGAP11844 174 aa4.22□□□□□ -1.73
SRGAP1-201ENST00000355086 TRBV7-7A0A0K0K1E9 115 aa4.22□□□□□ -1.73
SRGAP1-201ENST00000355086 KIAA1549LQ6ZVL6 1849 aa4.22□□□□□ -1.73
SRGAP1-201ENST00000355086 P0C879 139 aa4.22□□□□□ -1.73
SRGAP1-201ENST00000355086 C6orf223Q8N319 242 aa4.22□□□□□ -1.73
SRGAP1-201ENST00000355086 C11orf1Q9H5F2 150 aa4.22□□□□□ -1.73
SRGAP1-201ENST00000355086 SBSPONQ8IVN8 264 aa4.22□□□□□ -1.73
SRGAP1-201ENST00000355086 H0Y9P7 68 aa4.21□□□□□ -1.73
SRGAP1-201ENST00000355086 C9orf116Q5BN46 136 aaPredicted RBP4.21□□□□□ -1.73
SRGAP1-201ENST00000355086 PSPHP1O15172 72 aa4.21□□□□□ -1.73
SRGAP1-201ENST00000355086 RNASE3P12724 160 aaKnown RBP4.21□□□□□ -1.73
SRGAP1-201ENST00000355086 Q6JHZ5 121 aa4.21□□□□□ -1.73
SRGAP1-201ENST00000355086 Q8N814 137 aa4.21□□□□□ -1.74
SRGAP1-201ENST00000355086 C2orf48Q96LS8 159 aa4.21□□□□□ -1.74
SRGAP1-201ENST00000355086 BEAN1Q3B7T3 259 aa4.21□□□□□ -1.74
SRGAP1-201ENST00000355086 FSTL3O95633 263 aa4.21□□□□□ -1.74
SRGAP1-201ENST00000355086 LINC00337Q8N6G1 96 aa4.21□□□□□ -1.74
SRGAP1-201ENST00000355086 UNQ6190/PRO20217Q6UXQ8 127 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms