RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 A0A0J9YY99 117 aa12.91□□□□□ -0.34
TRIM41-202ENST00000351937 SRSF9Q13242 221 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRIM41-202ENST00000351937 VSIG2Q96IQ7 327 aa12.91□□□□□ -0.34
TRIM41-202ENST00000351937 CHCHD5Q9BSY4 110 aa12.91□□□□□ -0.34
TRIM41-202ENST00000351937 IGLV5-45A0A087WSX0 123 aa12.9□□□□□ -0.34
TRIM41-202ENST00000351937 GAGE6Q13070 117 aa12.9□□□□□ -0.34
TRIM41-202ENST00000351937 DNAH3Q8TD57 4116 aa12.9□□□□□ -0.35
TRIM41-202ENST00000351937 HERVK_113P63121 156 aa12.89□□□□□ -0.35
TRIM41-202ENST00000351937 IGHV1-58A0A0C4DH39 117 aa12.89□□□□□ -0.35
TRIM41-202ENST00000351937 LINC00242Q5T6M2 205 aa12.89□□□□□ -0.35
TRIM41-202ENST00000351937 IGHV3-64A0A075B6Q5 118 aa12.88□□□□□ -0.35
TRIM41-202ENST00000351937 IGHV3-30-3P0DP02 117 aa12.88□□□□□ -0.35
TRIM41-202ENST00000351937 F5H768 121 aa12.88□□□□□ -0.35
TRIM41-202ENST00000351937 RETNQ9HD89 108 aa12.88□□□□□ -0.35
TRIM41-202ENST00000351937 ANK2Q01484 3957 aa12.88□□□□□ -0.35
TRIM41-202ENST00000351937 CDKN2A-AS1Q9UH64 79 aa12.87□□□□□ -0.35
TRIM41-202ENST00000351937 TRAV13-1A0A0B4J241 112 aa12.87□□□□□ -0.35
TRIM41-202ENST00000351937 COX6A2Q02221 97 aa12.86□□□□□ -0.35
TRIM41-202ENST00000351937 SFTA2Q6UW10 78 aa12.86□□□□□ -0.35
TRIM41-202ENST00000351937 TRAV8-3A0A0A6YYJ7 113 aa12.85□□□□□ -0.35
TRIM41-202ENST00000351937 SCGB1A1P11684 91 aa12.85□□□□□ -0.35
TRIM41-202ENST00000351937 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
TRIM41-202ENST00000351937 A0A096LPF7 62 aa12.85□□□□□ -0.35
TRIM41-202ENST00000351937 SPINK8P0C7L1 97 aa12.85□□□□□ -0.35
TRIM41-202ENST00000351937 SPATA25Q9BR10 227 aa12.85□□□□□ -0.35
TRIM41-202ENST00000351937 IGLV4-60A0A075B6I1 120 aa12.84□□□□□ -0.35
TRIM41-202ENST00000351937 A6NJY4 79 aa12.84□□□□□ -0.35
TRIM41-202ENST00000351937 HTN3P15516 51 aa12.84□□□□□ -0.35
TRIM41-202ENST00000351937 PGPEP1Q9NXJ5 209 aa12.84□□□□□ -0.35
TRIM41-202ENST00000351937 IGHV3-30P01768 117 aa12.84□□□□□ -0.35
TRIM41-202ENST00000351937 IGHV3-30-5P0DP03 117 aa12.84□□□□□ -0.35
TRIM41-202ENST00000351937 MRPL23Q16540 153 aaKnown RBP12.84□□□□□ -0.35
TRIM41-202ENST00000351937 A0A1B0GUV1 79 aa12.83□□□□□ -0.36
TRIM41-202ENST00000351937 APOMO95445 188 aa12.82□□□□□ -0.36
TRIM41-202ENST00000351937 TMEM262E9PQX1 116 aa12.81□□□□□ -0.36
TRIM41-202ENST00000351937 ICOSQ9Y6W8 199 aa12.81□□□□□ -0.36
TRIM41-202ENST00000351937 F8W1H4 67 aa12.8□□□□□ -0.36
TRIM41-202ENST00000351937 IGLV5-39A0A0G2JS06 123 aa12.8□□□□□ -0.36
TRIM41-202ENST00000351937 MT-ATP8P03928 68 aa12.8□□□□□ -0.36
TRIM41-202ENST00000351937 C10orf126Q8N4M7 172 aa12.8□□□□□ -0.36
TRIM41-202ENST00000351937 NDUFA12Q9UI09 145 aa12.8□□□□□ -0.36
TRIM41-202ENST00000351937 ZFAND6Q6FIF0 208 aa12.79□□□□□ -0.36
TRIM41-202ENST00000351937 TSPAN13O95857 204 aa12.79□□□□□ -0.36
TRIM41-202ENST00000351937 PRO0461Q9UI25 63 aa12.79□□□□□ -0.36
TRIM41-202ENST00000351937 A0A0J9YXY3 114 aa12.78□□□□□ -0.36
TRIM41-202ENST00000351937 J3QR89 54 aa12.78□□□□□ -0.36
TRIM41-202ENST00000351937 CFC1BP0CG36 223 aa12.78□□□□□ -0.36
TRIM41-202ENST00000351937 CFC1P0CG37 223 aa12.78□□□□□ -0.36
TRIM41-202ENST00000351937 SMIM1B2RUZ4 78 aa12.77□□□□□ -0.36
TRIM41-202ENST00000351937 H3BNG1 76 aa12.77□□□□□ -0.37
TRIM41-202ENST00000351937 IGKV3OR2-268A0A0C4DH90 116 aa12.76□□□□□ -0.37
TRIM41-202ENST00000351937 A0A0J9YWU9 116 aa12.76□□□□□ -0.37
TRIM41-202ENST00000351937 KPRPQ5T749 579 aaPredicted RBP12.76□□□□□ -0.37
TRIM41-202ENST00000351937 MDFIQ99750 246 aa12.76□□□□□ -0.37
TRIM41-202ENST00000351937 CDIP1Q9H305 208 aa12.76□□□□□ -0.37
TRIM41-202ENST00000351937 PRB2P02812 416 aaPredicted RBP12.75□□□□□ -0.37
TRIM41-202ENST00000351937 LINC00959A0A1B0GUT2 108 aa12.75□□□□□ -0.37
TRIM41-202ENST00000351937 LELP1Q5T871 98 aa12.75□□□□□ -0.37
TRIM41-202ENST00000351937 SS18L2Q9UHA2 77 aa12.75□□□□□ -0.37
TRIM41-202ENST00000351937 NOTCH1P46531 2555 aa12.75□□□□□ -0.37
TRIM41-202ENST00000351937 K7EIL1 84 aa12.75□□□□□ -0.37
TRIM41-202ENST00000351937 NDUFA1O15239 70 aa12.75□□□□□ -0.37
TRIM41-202ENST00000351937 Q6ZTC4 211 aa12.75□□□□□ -0.37
TRIM41-202ENST00000351937 LOC107984156A0A0G2JMH3 177 aa12.74□□□□□ -0.37
TRIM41-202ENST00000351937 SMCPP49901 116 aaPredicted RBP12.74□□□□□ -0.37
TRIM41-202ENST00000351937 ARL17AQ8IVW1 177 aa12.74□□□□□ -0.37
TRIM41-202ENST00000351937 A4D1N5 150 aa12.74□□□□□ -0.37
TRIM41-202ENST00000351937 XGP55808 180 aa12.74□□□□□ -0.37
TRIM41-202ENST00000351937 MUSTN1Q8IVN3 82 aa12.74□□□□□ -0.37
TRIM41-202ENST00000351937 IGHV3OR16-9A0A0B4J2B5 98 aa12.73□□□□□ -0.37
TRIM41-202ENST00000351937 EIF4EBP3O60516 100 aaPredicted RBP12.73□□□□□ -0.37
TRIM41-202ENST00000351937 C11orf45Q8TAV5 145 aa12.72□□□□□ -0.37
TRIM41-202ENST00000351937 FOXI1Q12951 378 aa12.72□□□□□ -0.37
TRIM41-202ENST00000351937 SS18Q15532 418 aa12.72□□□□□ -0.37
TRIM41-202ENST00000351937 LITAFQ99732 161 aa12.72□□□□□ -0.37
TRIM41-202ENST00000351937 TM2D3Q9BRN9 247 aa12.72□□□□□ -0.37
TRIM41-202ENST00000351937 DEFB121Q5J5C9 76 aa12.71□□□□□ -0.37
TRIM41-202ENST00000351937 PRO1854Q9UHT4 67 aa12.71□□□□□ -0.37
TRIM41-202ENST00000351937 NBEAL1Q6ZS30 2694 aa12.71□□□□□ -0.37
TRIM41-202ENST00000351937 PSMB2P49721 201 aa12.71□□□□□ -0.38
TRIM41-202ENST00000351937 TIMM17BO60830 172 aa12.7□□□□□ -0.38
TRIM41-202ENST00000351937 LYPD5Q6UWN5 251 aa12.7□□□□□ -0.38
TRIM41-202ENST00000351937 A0A087WZ39 114 aa12.7□□□□□ -0.38
TRIM41-202ENST00000351937 NANOS2P60321 138 aaKnown RBP12.69□□□□□ -0.38
TRIM41-202ENST00000351937 Q9H8V8 135 aa12.69□□□□□ -0.38
TRIM41-202ENST00000351937 LINC00269Q8N2A0 174 aa12.69□□□□□ -0.38
TRIM41-202ENST00000351937 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
TRIM41-202ENST00000351937 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
TRIM41-202ENST00000351937 ANGP03950 147 aaKnown RBP12.68□□□□□ -0.38
TRIM41-202ENST00000351937 ADAMTSL4-AS1Q5T5F5 129 aa12.68□□□□□ -0.38
TRIM41-202ENST00000351937 ZNF625Q96I27 306 aaPredicted RBP12.67□□□□□ -0.38
TRIM41-202ENST00000351937 CIRBPQ14011 172 aaKnown RBP12.67□□□□□ -0.38
TRIM41-202ENST00000351937 TENM3Q9P273 2699 aa12.67□□□□□ -0.38
TRIM41-202ENST00000351937 DEFB131BA0A096LNP1 70 aa12.66□□□□□ -0.38
TRIM41-202ENST00000351937 CLPSL2Q6UWE3 100 aa12.66□□□□□ -0.38
TRIM41-202ENST00000351937 MRAPQ8TCY5 172 aa12.66□□□□□ -0.38
TRIM41-202ENST00000351937 TCL1BO95988 128 aa12.66□□□□□ -0.38
TRIM41-202ENST00000351937 IGHV3-33P01772 117 aa12.66□□□□□ -0.38
TRIM41-202ENST00000351937 XCL1P47992 114 aa12.66□□□□□ -0.38
TRIM41-202ENST00000351937 HERV-K104P63124 156 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms