RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 SPART-AS1P0CW21 52 aa12.05□□□□□ -0.48
SMARCC2-202ENST00000347471 Q8N3U1 123 aa12.05□□□□□ -0.48
SMARCC2-202ENST00000347471 KIR2DL5BQ8NHK3 375 aa12.05□□□□□ -0.48
SMARCC2-202ENST00000347471 TM2D2Q9BX73 214 aa12.05□□□□□ -0.48
SMARCC2-202ENST00000347471 SMIM9A6NGZ8 99 aa12.05□□□□□ -0.48
SMARCC2-202ENST00000347471 ATP5G1P05496 136 aa12.05□□□□□ -0.48
SMARCC2-202ENST00000347471 Q9H8V8 135 aa12.05□□□□□ -0.48
SMARCC2-202ENST00000347471 GTF2H5Q6ZYL4 71 aa12.04□□□□□ -0.48
SMARCC2-202ENST00000347471 A0A1W2PPM0 123 aa12.04□□□□□ -0.48
SMARCC2-202ENST00000347471 A0A0J9YXY3 114 aa12.03□□□□□ -0.48
SMARCC2-202ENST00000347471 SCGB1C2P0DMR2 95 aa12.03□□□□□ -0.48
SMARCC2-202ENST00000347471 HERVK_113P63121 156 aa12.03□□□□□ -0.48
SMARCC2-202ENST00000347471 MUSTN1Q8IVN3 82 aa12.03□□□□□ -0.48
SMARCC2-202ENST00000347471 A4D1N5 150 aa12.03□□□□□ -0.48
SMARCC2-202ENST00000347471 SHISA2Q6UWI4 295 aa12.03□□□□□ -0.48
SMARCC2-202ENST00000347471 SMAGPQ0VAQ4 97 aa12.02□□□□□ -0.48
SMARCC2-202ENST00000347471 LYRM9A8MSI8 78 aa12.02□□□□□ -0.49
SMARCC2-202ENST00000347471 RNF151Q2KHN1 245 aa12.02□□□□□ -0.49
SMARCC2-202ENST00000347471 PSMB2P49721 201 aa12.02□□□□□ -0.49
SMARCC2-202ENST00000347471 IGLL5B9A064 214 aa12.01□□□□□ -0.49
SMARCC2-202ENST00000347471 ANGP03950 147 aaKnown RBP12.01□□□□□ -0.49
SMARCC2-202ENST00000347471 TAL2Q16559 108 aa12.01□□□□□ -0.49
SMARCC2-202ENST00000347471 TMEM238C9JI98 176 aa12.01□□□□□ -0.49
SMARCC2-202ENST00000347471 TENM3Q9P273 2699 aa12.01□□□□□ -0.49
SMARCC2-202ENST00000347471 Q8NAQ8 132 aa12.01□□□□□ -0.49
SMARCC2-202ENST00000347471 MIFP14174 115 aa12□□□□□ -0.49
SMARCC2-202ENST00000347471 RNF183Q96D59 192 aa12□□□□□ -0.49
SMARCC2-202ENST00000347471 RBX1P62877 108 aa11.99□□□□□ -0.49
SMARCC2-202ENST00000347471 ADAMTSL4-AS1Q5T5F5 129 aa11.99□□□□□ -0.49
SMARCC2-202ENST00000347471 H3BMG7 143 aa11.98□□□□□ -0.49
SMARCC2-202ENST00000347471 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
SMARCC2-202ENST00000347471 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
SMARCC2-202ENST00000347471 RPL24P83731 157 aaKnown RBP11.98□□□□□ -0.49
SMARCC2-202ENST00000347471 SBSPONQ8IVN8 264 aa11.98□□□□□ -0.49
SMARCC2-202ENST00000347471 LINC00269Q8N2A0 174 aa11.97□□□□□ -0.49
SMARCC2-202ENST00000347471 CIDEAO60543 219 aa11.97□□□□□ -0.49
SMARCC2-202ENST00000347471 GTSF1LQ9H1H1 148 aa11.97□□□□□ -0.49
SMARCC2-202ENST00000347471 K7EP34 96 aa11.96□□□□□ -0.49
SMARCC2-202ENST00000347471 PFN2P35080 140 aa11.96□□□□□ -0.5
SMARCC2-202ENST00000347471 SMIM1B2RUZ4 78 aa11.95□□□□□ -0.5
SMARCC2-202ENST00000347471 TIRAPP58753 221 aa11.95□□□□□ -0.5
SMARCC2-202ENST00000347471 CIRBPQ14011 172 aaKnown RBP11.95□□□□□ -0.5
SMARCC2-202ENST00000347471 IGHV3-33P01772 117 aa11.95□□□□□ -0.5
SMARCC2-202ENST00000347471 CFC1BP0CG36 223 aa11.95□□□□□ -0.5
SMARCC2-202ENST00000347471 CFC1P0CG37 223 aa11.95□□□□□ -0.5
SMARCC2-202ENST00000347471 Q6ZTC4 211 aa11.95□□□□□ -0.5
SMARCC2-202ENST00000347471 A0A0J9YWU9 116 aa11.94□□□□□ -0.5
SMARCC2-202ENST00000347471 NANOS2P60321 138 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-202ENST00000347471 MRPL23Q16540 153 aaKnown RBP11.93□□□□□ -0.5
SMARCC2-202ENST00000347471 ZFAND6Q6FIF0 208 aa11.93□□□□□ -0.5
SMARCC2-202ENST00000347471 EIF4EBP3O60516 100 aaPredicted RBP11.92□□□□□ -0.5
SMARCC2-202ENST00000347471 LINC00158P58513 81 aa11.92□□□□□ -0.5
SMARCC2-202ENST00000347471 C6orf226Q5I0X4 101 aa11.92□□□□□ -0.5
SMARCC2-202ENST00000347471 CSDC2Q9Y534 153 aaKnown RBP11.92□□□□□ -0.5
SMARCC2-202ENST00000347471 TSPAN13O95857 204 aa11.92□□□□□ -0.5
SMARCC2-202ENST00000347471 SS18Q15532 418 aa11.92□□□□□ -0.5
SMARCC2-202ENST00000347471 LINC00612Q8N6U2 182 aa11.92□□□□□ -0.5
SMARCC2-202ENST00000347471 KLK12Q9UKR0 248 aa11.92□□□□□ -0.5
SMARCC2-202ENST00000347471 PRO1854Q9UHT4 67 aa11.92□□□□□ -0.5
SMARCC2-202ENST00000347471 ICOSQ9Y6W8 199 aa11.91□□□□□ -0.5
SMARCC2-202ENST00000347471 LINC00959A0A1B0GUT2 108 aa11.91□□□□□ -0.5
SMARCC2-202ENST00000347471 LINC00526Q96FQ7 95 aa11.9□□□□□ -0.5
SMARCC2-202ENST00000347471 ERG28Q9UKR5 140 aa11.9□□□□□ -0.5
SMARCC2-202ENST00000347471 MALP21145 153 aa11.9□□□□□ -0.5
SMARCC2-202ENST00000347471 SPANXB1Q9NS25 103 aaPredicted RBP11.89□□□□□ -0.51
SMARCC2-202ENST00000347471 COX7B2Q8TF08 81 aa11.89□□□□□ -0.51
SMARCC2-202ENST00000347471 C2orf82Q6UX34 121 aa11.88□□□□□ -0.51
SMARCC2-202ENST00000347471 UBE2WQ96B02 151 aa11.88□□□□□ -0.51
SMARCC2-202ENST00000347471 REG3AQ06141 175 aa11.87□□□□□ -0.51
SMARCC2-202ENST00000347471 KPRPQ5T749 579 aaPredicted RBP11.87□□□□□ -0.51
SMARCC2-202ENST00000347471 NDUFA1O15239 70 aa11.86□□□□□ -0.51
SMARCC2-202ENST00000347471 WFDC2Q14508 124 aa11.86□□□□□ -0.51
SMARCC2-202ENST00000347471 MIAQ16674 131 aa11.86□□□□□ -0.51
SMARCC2-202ENST00000347471 IGLV5-45A0A087WSX0 123 aa11.86□□□□□ -0.51
SMARCC2-202ENST00000347471 H7C423 109 aa11.86□□□□□ -0.51
SMARCC2-202ENST00000347471 C11orf45Q8TAV5 145 aa11.85□□□□□ -0.51
SMARCC2-202ENST00000347471 SH2D6Q7Z4S9 175 aa11.85□□□□□ -0.51
SMARCC2-202ENST00000347471 CHCHD10Q8WYQ3 142 aaPredicted RBP11.85□□□□□ -0.51
SMARCC2-202ENST00000347471 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.84□□□□□ -0.51
SMARCC2-202ENST00000347471 ETDBQ3ZM63 59 aa11.84□□□□□ -0.51
SMARCC2-202ENST00000347471 MIR7-3HGQ8N6C7 128 aa11.84□□□□□ -0.51
SMARCC2-202ENST00000347471 LITAFQ99732 161 aa11.84□□□□□ -0.51
SMARCC2-202ENST00000347471 VPS25Q9BRG1 176 aa11.84□□□□□ -0.51
SMARCC2-202ENST00000347471 A0A1B0GWB2 263 aa11.84□□□□□ -0.51
SMARCC2-202ENST00000347471 IGHV3OR16-9A0A0B4J2B5 98 aa11.84□□□□□ -0.51
SMARCC2-202ENST00000347471 IGLV5-39A0A0G2JS06 123 aa11.84□□□□□ -0.51
SMARCC2-202ENST00000347471 CKS1BP61024 79 aa11.84□□□□□ -0.51
SMARCC2-202ENST00000347471 DEFB131BA0A096LNP1 70 aa11.83□□□□□ -0.52
SMARCC2-202ENST00000347471 WIPF1O43516 503 aa11.83□□□□□ -0.52
SMARCC2-202ENST00000347471 RPL13AP40429 203 aaKnown RBP11.83□□□□□ -0.52
SMARCC2-202ENST00000347471 CRPP02741 224 aa11.83□□□□□ -0.52
SMARCC2-202ENST00000347471 CFAP161Q6P656 301 aa11.82□□□□□ -0.52
SMARCC2-202ENST00000347471 WFDC10BQ8IUB3 73 aa11.81□□□□□ -0.52
SMARCC2-202ENST00000347471 LINC00308Q8TCZ7 52 aa11.81□□□□□ -0.52
SMARCC2-202ENST00000347471 TCL1BO95988 128 aa11.8□□□□□ -0.52
SMARCC2-202ENST00000347471 OCIAD2Q56VL3 154 aa11.8□□□□□ -0.52
SMARCC2-202ENST00000347471 OR13C6PQ8NH95 151 aa11.8□□□□□ -0.52
SMARCC2-202ENST00000347471 STAB2Q8WWQ8 2551 aa11.8□□□□□ -0.52
SMARCC2-202ENST00000347471 COX7A2LO14548 114 aa11.8□□□□□ -0.52
SMARCC2-202ENST00000347471 MDFIQ99750 246 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms