RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PMVKQ15126 192 aa10.85□□□□□ -0.67
RAB5C-201ENST00000346213 ABCA13Q86UQ4 5058 aa10.84□□□□□ -0.67
RAB5C-201ENST00000346213 SCGB1A1P11684 91 aa10.84□□□□□ -0.67
RAB5C-201ENST00000346213 CHCHD7Q9BUK0 85 aa10.84□□□□□ -0.67
RAB5C-201ENST00000346213 DNAH10OSP0CZ25 163 aa10.83□□□□□ -0.68
RAB5C-201ENST00000346213 ZC2HC1BQ5TFG8 222 aa10.83□□□□□ -0.68
RAB5C-201ENST00000346213 IGHV3-38A0A0C4DH36 116 aa10.82□□□□□ -0.68
RAB5C-201ENST00000346213 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
RAB5C-201ENST00000346213 UBE2D3P61077 147 aa10.82□□□□□ -0.68
RAB5C-201ENST00000346213 UBE2D2P62837 147 aa10.82□□□□□ -0.68
RAB5C-201ENST00000346213 GAGE4Q13068 117 aa10.82□□□□□ -0.68
RAB5C-201ENST00000346213 GAGE5Q13069 117 aa10.82□□□□□ -0.68
RAB5C-201ENST00000346213 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
RAB5C-201ENST00000346213 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
RAB5C-201ENST00000346213 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
RAB5C-201ENST00000346213 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
RAB5C-201ENST00000346213 FGF6P10767 208 aa10.82□□□□□ -0.68
RAB5C-201ENST00000346213 BOD1L2Q8IYS8 172 aa10.82□□□□□ -0.68
RAB5C-201ENST00000346213 IGLV4-3A0A075B6K6 122 aa10.81□□□□□ -0.68
RAB5C-201ENST00000346213 TIRAPP58753 221 aa10.81□□□□□ -0.68
RAB5C-201ENST00000346213 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
RAB5C-201ENST00000346213 KRTAP4-5Q9BYR2 181 aa10.8□□□□□ -0.68
RAB5C-201ENST00000346213 SPANXA1Q9NS26 97 aa10.8□□□□□ -0.68
RAB5C-201ENST00000346213 TAX1BP3O14907 124 aa10.79□□□□□ -0.68
RAB5C-201ENST00000346213 OPRPNQ99935 248 aaPredicted RBP10.79□□□□□ -0.68
RAB5C-201ENST00000346213 PRADC1Q9BSG0 188 aa10.79□□□□□ -0.68
RAB5C-201ENST00000346213 TP73-AS1Q9UF72 201 aa10.79□□□□□ -0.68
RAB5C-201ENST00000346213 IGKV2D-26A0A0A0MRZ7 120 aa10.79□□□□□ -0.68
RAB5C-201ENST00000346213 NMUP48645 174 aa10.79□□□□□ -0.68
RAB5C-201ENST00000346213 GTF2H5Q6ZYL4 71 aa10.79□□□□□ -0.68
RAB5C-201ENST00000346213 TIMM21Q9BVV7 248 aa10.79□□□□□ -0.68
RAB5C-201ENST00000346213 VCX2Q9H322 139 aa10.79□□□□□ -0.68
RAB5C-201ENST00000346213 UBE2D4Q9Y2X8 147 aa10.79□□□□□ -0.68
RAB5C-201ENST00000346213 ATP6V0E2Q8NHE4 81 aa10.78□□□□□ -0.68
RAB5C-201ENST00000346213 FAM104AQ969W3 186 aa10.78□□□□□ -0.68
RAB5C-201ENST00000346213 AMELXQ99217 191 aa10.78□□□□□ -0.68
RAB5C-201ENST00000346213 GTSF1LQ9H1H1 148 aa10.78□□□□□ -0.68
RAB5C-201ENST00000346213 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-201ENST00000346213 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-201ENST00000346213 C11orf86A6NJI1 115 aa10.77□□□□□ -0.69
RAB5C-201ENST00000346213 C2orf91Q6ZV80 131 aa10.77□□□□□ -0.69
RAB5C-201ENST00000346213 NFE4Q86UQ8 179 aa10.77□□□□□ -0.69
RAB5C-201ENST00000346213 PCP2Q8IVA1 136 aa10.77□□□□□ -0.69
RAB5C-201ENST00000346213 C16orf90A8MZG2 172 aa10.76□□□□□ -0.69
RAB5C-201ENST00000346213 IGHV3-30P01768 117 aa10.76□□□□□ -0.69
RAB5C-201ENST00000346213 IGHV3-33P01772 117 aa10.76□□□□□ -0.69
RAB5C-201ENST00000346213 IGHV3-30-3P0DP02 117 aa10.76□□□□□ -0.69
RAB5C-201ENST00000346213 IGHV3-30-5P0DP03 117 aa10.76□□□□□ -0.69
RAB5C-201ENST00000346213 SEC11AP67812 179 aa10.76□□□□□ -0.69
RAB5C-201ENST00000346213 LINC01556Q5JQF7 62 aa10.76□□□□□ -0.69
RAB5C-201ENST00000346213 BVES-AS1Q5T3Y7 98 aa10.76□□□□□ -0.69
RAB5C-201ENST00000346213 LELP1Q5T871 98 aa10.76□□□□□ -0.69
RAB5C-201ENST00000346213 NTM-AS1Q6ZSK4 140 aa10.76□□□□□ -0.69
RAB5C-201ENST00000346213 E9PLD3 99 aa10.75□□□□□ -0.69
RAB5C-201ENST00000346213 MRPS36P82909 103 aaKnown RBP10.75□□□□□ -0.69
RAB5C-201ENST00000346213 SH2D6Q7Z4S9 175 aa10.74□□□□□ -0.69
RAB5C-201ENST00000346213 A0A087WTM6 91 aa10.73□□□□□ -0.69
RAB5C-201ENST00000346213 SMAGPQ0VAQ4 97 aa10.73□□□□□ -0.69
RAB5C-201ENST00000346213 TMEM97Q5BJF2 176 aa10.73□□□□□ -0.69
RAB5C-201ENST00000346213 CSDC2Q9Y534 153 aaKnown RBP10.73□□□□□ -0.69
RAB5C-201ENST00000346213 HERVK_113P61574 105 aa10.73□□□□□ -0.69
RAB5C-201ENST00000346213 WFDC2Q14508 124 aa10.73□□□□□ -0.69
RAB5C-201ENST00000346213 AMMECR1LQ6DCA0 310 aa10.73□□□□□ -0.69
RAB5C-201ENST00000346213 HIGD1BQ9P298 99 aa10.73□□□□□ -0.69
RAB5C-201ENST00000346213 LRCOL1A6NCL2 159 aa10.72□□□□□ -0.69
RAB5C-201ENST00000346213 IBA57-AS1B1ANH7 110 aa10.72□□□□□ -0.69
RAB5C-201ENST00000346213 H7C423 109 aa10.72□□□□□ -0.69
RAB5C-201ENST00000346213 MPV17L2Q567V2 206 aa10.72□□□□□ -0.69
RAB5C-201ENST00000346213 Q6ZUT4 128 aa10.72□□□□□ -0.69
RAB5C-201ENST00000346213 TMEM243Q9BU79 118 aa10.72□□□□□ -0.69
RAB5C-201ENST00000346213 CHAC1Q9BUX1 264 aa10.72□□□□□ -0.69
RAB5C-201ENST00000346213 TTTY13Q9BZ97 58 aa10.72□□□□□ -0.69
RAB5C-201ENST00000346213 TRBV25-1A0A075B6N4 114 aa10.71□□□□□ -0.69
RAB5C-201ENST00000346213 A0A0J9YXV3 536 aa10.71□□□□□ -0.69
RAB5C-201ENST00000346213 TMEM170BQ5T4T1 132 aa10.71□□□□□ -0.69
RAB5C-201ENST00000346213 DGAT2L7PQ6IED9 249 aa10.71□□□□□ -0.69
RAB5C-201ENST00000346213 OR5A1Q8NGJ0 315 aa10.71□□□□□ -0.69
RAB5C-201ENST00000346213 Q9HAA7 133 aa10.71□□□□□ -0.69
RAB5C-201ENST00000346213 TRAV8-6A0A0B4J262 113 aa10.7□□□□□ -0.7
RAB5C-201ENST00000346213 GAGE10A6NGK3 116 aa10.7□□□□□ -0.7
RAB5C-201ENST00000346213 MAPKAPK5-AS1Q8N8E1 139 aa10.7□□□□□ -0.7
RAB5C-201ENST00000346213 ZNF22P17026 224 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-201ENST00000346213 Q6ZVH6 145 aa10.69□□□□□ -0.7
RAB5C-201ENST00000346213 FAT1Q14517 4588 aa10.69□□□□□ -0.7
RAB5C-201ENST00000346213 TRBV6-8A0A0A6YYG3 113 aa10.69□□□□□ -0.7
RAB5C-201ENST00000346213 A0A1B0GV72 72 aa10.69□□□□□ -0.7
RAB5C-201ENST00000346213 TINCRA0A1B0GVN0 87 aa10.69□□□□□ -0.7
RAB5C-201ENST00000346213 TMEM223A0PJW6 202 aa10.69□□□□□ -0.7
RAB5C-201ENST00000346213 A6NDN8 102 aa10.69□□□□□ -0.7
RAB5C-201ENST00000346213 H3BRM9 83 aa10.69□□□□□ -0.7
RAB5C-201ENST00000346213 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
RAB5C-201ENST00000346213 UBE2L6O14933 153 aa10.68□□□□□ -0.7
RAB5C-201ENST00000346213 HSD52Q0P140 79 aa10.68□□□□□ -0.7
RAB5C-201ENST00000346213 DNAH8Q96JB1 4490 aa10.68□□□□□ -0.7
RAB5C-201ENST00000346213 MYMXA0A1B0GTQ4 84 aa10.67□□□□□ -0.7
RAB5C-201ENST00000346213 UBE2D1P51668 147 aa10.67□□□□□ -0.7
RAB5C-201ENST00000346213 KRTAP10-1P60331 282 aa10.67□□□□□ -0.7
RAB5C-201ENST00000346213 CDC42SE2Q9NRR3 84 aa10.67□□□□□ -0.7
RAB5C-201ENST00000346213 K7EP34 96 aa10.66□□□□□ -0.7
RAB5C-201ENST00000346213 FAM19A3Q7Z5A8 133 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms