RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 MUC4Q99102 2169 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 H7BZZ5 65 aa8.62□□□□□ -1.03
RTN3-203ENST00000341307 VCYO14598 125 aa8.62□□□□□ -1.03
RTN3-203ENST00000341307 IGHG2P01859 326 aa8.62□□□□□ -1.03
RTN3-203ENST00000341307 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
RTN3-203ENST00000341307 PHLDA3Q9Y5J5 127 aa8.62□□□□□ -1.03
RTN3-203ENST00000341307 SMIM26A0A096LP01 95 aa8.62□□□□□ -1.03
RTN3-203ENST00000341307 A8MZ25 164 aa8.62□□□□□ -1.03
RTN3-203ENST00000341307 GHRHP01286 108 aa8.62□□□□□ -1.03
RTN3-203ENST00000341307 HILS1P60008 231 aa8.62□□□□□ -1.03
RTN3-203ENST00000341307 C9orf129Q5T035 196 aaKnown RBP8.62□□□□□ -1.03
RTN3-203ENST00000341307 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
RTN3-203ENST00000341307 XCL1P47992 114 aa8.61□□□□□ -1.03
RTN3-203ENST00000341307 UNQ9165/PRO28630Q6UXU0 137 aa8.61□□□□□ -1.03
RTN3-203ENST00000341307 IL17DQ8TAD2 202 aa8.61□□□□□ -1.03
RTN3-203ENST00000341307 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
RTN3-203ENST00000341307 CR1P17927 2039 aa8.61□□□□□ -1.03
RTN3-203ENST00000341307 C10orf99Q6UWK7 81 aa8.61□□□□□ -1.03
RTN3-203ENST00000341307 DNAL4O96015 105 aa8.6□□□□□ -1.03
RTN3-203ENST00000341307 IGHV4-31P0DP07 118 aa8.6□□□□□ -1.03
RTN3-203ENST00000341307 S100A4P26447 101 aaKnown RBP8.6□□□□□ -1.03
RTN3-203ENST00000341307 SUMO4Q6EEV6 95 aa8.6□□□□□ -1.03
RTN3-203ENST00000341307 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
RTN3-203ENST00000341307 RPL28P46779 137 aaKnown RBP8.6□□□□□ -1.03
RTN3-203ENST00000341307 LINC00474Q9P2X8 69 aa8.6□□□□□ -1.03
RTN3-203ENST00000341307 ANK3Q12955 4377 aaKnown RBP8.6□□□□□ -1.03
RTN3-203ENST00000341307 NSD1Q96L73 2696 aaPredicted RBP8.59□□□□□ -1.03
RTN3-203ENST00000341307 IGHV1-58A0A0C4DH39 117 aa8.59□□□□□ -1.03
RTN3-203ENST00000341307 RBMY1BA6NDE4 496 aaKnown RBP8.59□□□□□ -1.03
RTN3-203ENST00000341307 RBMY1EA6NEQ0 496 aaKnown RBP8.59□□□□□ -1.03
RTN3-203ENST00000341307 RBMY1DP0C7P1 496 aaKnown RBP8.59□□□□□ -1.03
RTN3-203ENST00000341307 RBMY1A1P0DJD3 496 aaKnown RBP8.59□□□□□ -1.03
RTN3-203ENST00000341307 RBMY1CP0DJD4 496 aa8.59□□□□□ -1.03
RTN3-203ENST00000341307 RBMY1FQ15415 496 aaKnown RBP8.59□□□□□ -1.03
RTN3-203ENST00000341307 Q9HAA7 133 aa8.59□□□□□ -1.03
RTN3-203ENST00000341307 C14orf132Q9NPU4 83 aa8.59□□□□□ -1.03
RTN3-203ENST00000341307 IGLV4-3A0A075B6K6 122 aa8.58□□□□□ -1.04
RTN3-203ENST00000341307 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
RTN3-203ENST00000341307 FN1P02751 2386 aaKnown RBP8.58□□□□□ -1.04
RTN3-203ENST00000341307 KNCNA6PVL3 124 aa8.58□□□□□ -1.04
RTN3-203ENST00000341307 KRTAP1-1Q07627 177 aa8.57□□□□□ -1.04
RTN3-203ENST00000341307 JMJD1CQ15652 2540 aa8.57□□□□□ -1.04
RTN3-203ENST00000341307 GNRH2O43555 120 aa8.57□□□□□ -1.04
RTN3-203ENST00000341307 HIVEP2P31629 2446 aa8.57□□□□□ -1.04
RTN3-203ENST00000341307 TRAV23DV6A0A075B6W5 121 aa8.56□□□□□ -1.04
RTN3-203ENST00000341307 TIMM17BO60830 172 aa8.56□□□□□ -1.04
RTN3-203ENST00000341307 LY6G6DO95868 133 aa8.56□□□□□ -1.04
RTN3-203ENST00000341307 IGLV1-40P01703 118 aa8.56□□□□□ -1.04
RTN3-203ENST00000341307 ZFAND2AQ8N6M9 145 aa8.56□□□□□ -1.04
RTN3-203ENST00000341307 FAM104AQ969W3 186 aa8.56□□□□□ -1.04
RTN3-203ENST00000341307 VSIG2Q96IQ7 327 aa8.56□□□□□ -1.04
RTN3-203ENST00000341307 IGKV3-7A0A075B6H7 116 aa8.56□□□□□ -1.04
RTN3-203ENST00000341307 MED14OSP0DP75 135 aa8.56□□□□□ -1.04
RTN3-203ENST00000341307 CFHR3Q02985 330 aa8.56□□□□□ -1.04
RTN3-203ENST00000341307 MRPS36P82909 103 aaKnown RBP8.55□□□□□ -1.04
RTN3-203ENST00000341307 FAM19A1Q7Z5A9 133 aa8.55□□□□□ -1.04
RTN3-203ENST00000341307 U3KQE9 123 aa8.55□□□□□ -1.04
RTN3-203ENST00000341307 DEFB1P60022 68 aa8.55□□□□□ -1.04
RTN3-203ENST00000341307 SS18Q15532 418 aa8.55□□□□□ -1.04
RTN3-203ENST00000341307 C20orf203Q8NBC4 194 aa8.55□□□□□ -1.04
RTN3-203ENST00000341307 WFDC9Q8NEX5 89 aa8.55□□□□□ -1.04
RTN3-203ENST00000341307 LINC00308Q8TCZ7 52 aa8.55□□□□□ -1.04
RTN3-203ENST00000341307 OBSCN-AS1Q96MR7 158 aa8.55□□□□□ -1.04
RTN3-203ENST00000341307 A0A087WWL8 130 aa8.54□□□□□ -1.04
RTN3-203ENST00000341307 TRBV6-5A0A0K0K1A5 114 aa8.54□□□□□ -1.04
RTN3-203ENST00000341307 A0A1W2PRX2 142 aa8.54□□□□□ -1.04
RTN3-203ENST00000341307 RNASE4P34096 147 aaKnown RBP8.54□□□□□ -1.04
RTN3-203ENST00000341307 MRPL53Q96EL3 112 aaKnown RBP8.54□□□□□ -1.04
RTN3-203ENST00000341307 USMG5Q96IX5 58 aa8.54□□□□□ -1.04
RTN3-203ENST00000341307 C20orf173Q96LM9 149 aa8.54□□□□□ -1.04
RTN3-203ENST00000341307 TRAV21A0A0B4J279 112 aa8.54□□□□□ -1.04
RTN3-203ENST00000341307 NDUFA4O00483 81 aa8.53□□□□□ -1.04
RTN3-203ENST00000341307 FSHBP01225 129 aa8.53□□□□□ -1.04
RTN3-203ENST00000341307 HOXD3P31249 432 aaPredicted RBP8.53□□□□□ -1.04
RTN3-203ENST00000341307 RPL11P62913 178 aaKnown RBP8.53□□□□□ -1.04
RTN3-203ENST00000341307 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
RTN3-203ENST00000341307 F5H697 171 aa8.53□□□□□ -1.04
RTN3-203ENST00000341307 H3BUA1 57 aa8.53□□□□□ -1.04
RTN3-203ENST00000341307 Q6YL49 198 aa8.53□□□□□ -1.04
RTN3-203ENST00000341307 TRBV7-6A0A0J9YX20 115 aa8.52□□□□□ -1.05
RTN3-203ENST00000341307 INAFM1C9JVW0 142 aa8.52□□□□□ -1.05
RTN3-203ENST00000341307 CCKP06307 115 aa8.52□□□□□ -1.05
RTN3-203ENST00000341307 C6orf226Q5I0X4 101 aa8.52□□□□□ -1.05
RTN3-203ENST00000341307 HIST2H2BDQ6DRA6 164 aa8.52□□□□□ -1.05
RTN3-203ENST00000341307 LENEPQ9Y5L5 61 aa8.52□□□□□ -1.05
RTN3-203ENST00000341307 KLKP1Q107X0 134 aa8.5□□□□□ -1.05
RTN3-203ENST00000341307 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
RTN3-203ENST00000341307 RHPN1-AS1Q9BWJ2 59 aa8.5□□□□□ -1.05
RTN3-203ENST00000341307 F6UB75 175 aa8.5□□□□□ -1.05
RTN3-203ENST00000341307 ZNF702PQ9H963 129 aa8.5□□□□□ -1.05
RTN3-203ENST00000341307 FBN1P35555 2871 aaKnown RBP8.5□□□□□ -1.05
RTN3-203ENST00000341307 NDUFA1O15239 70 aa8.49□□□□□ -1.05
RTN3-203ENST00000341307 M0QY20 66 aa8.49□□□□□ -1.05
RTN3-203ENST00000341307 CD28P10747 220 aa8.49□□□□□ -1.05
RTN3-203ENST00000341307 RMI2Q96E14 147 aa8.49□□□□□ -1.05
RTN3-203ENST00000341307 ZNF625Q96I27 306 aaPredicted RBP8.49□□□□□ -1.05
RTN3-203ENST00000341307 A0A0U1RRA0 63 aa8.48□□□□□ -1.05
RTN3-203ENST00000341307 A0A087WYN8 130 aa8.48□□□□□ -1.05
RTN3-203ENST00000341307 F8WEM9 126 aa8.48□□□□□ -1.05
RTN3-203ENST00000341307 SOCS3O14543 225 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms