RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SPINK13Q1W4C9 94 aa10.95□□□□□ -0.66
BRAT1-201ENST00000340611 IMUPQ9GZP8 106 aa10.95□□□□□ -0.66
BRAT1-201ENST00000340611 PYGO1Q9Y3Y4 419 aa10.95□□□□□ -0.66
BRAT1-201ENST00000340611 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.94□□□□□ -0.66
BRAT1-201ENST00000340611 A0A0J9YX75 114 aa10.94□□□□□ -0.66
BRAT1-201ENST00000340611 PRM2P04554 102 aa10.94□□□□□ -0.66
BRAT1-201ENST00000340611 LINC00315P59091 139 aa10.94□□□□□ -0.66
BRAT1-201ENST00000340611 SUMO4Q6EEV6 95 aa10.94□□□□□ -0.66
BRAT1-201ENST00000340611 LINC00643Q86TS7 51 aa10.94□□□□□ -0.66
BRAT1-201ENST00000340611 MAP6D1Q9H9H5 199 aa10.94□□□□□ -0.66
BRAT1-201ENST00000340611 LENEPQ9Y5L5 61 aa10.94□□□□□ -0.66
BRAT1-201ENST00000340611 FAM74A4Q5TZK3 123 aa10.93□□□□□ -0.66
BRAT1-201ENST00000340611 SDIM1Q6ZPB5 146 aa10.93□□□□□ -0.66
BRAT1-201ENST00000340611 LINC00482Q8N8I6 264 aa10.93□□□□□ -0.66
BRAT1-201ENST00000340611 ODF3L2Q3SX64 289 aa10.93□□□□□ -0.66
BRAT1-201ENST00000340611 MRAPQ8TCY5 172 aa10.93□□□□□ -0.66
BRAT1-201ENST00000340611 SDHAF1A6NFY7 115 aa10.92□□□□□ -0.66
BRAT1-201ENST00000340611 I3L3M4 83 aa10.92□□□□□ -0.66
BRAT1-201ENST00000340611 PAPPA-AS1Q5QFB9 102 aa10.92□□□□□ -0.66
BRAT1-201ENST00000340611 KIF25-AS1Q9Y6Z4 181 aa10.92□□□□□ -0.66
BRAT1-201ENST00000340611 RBMY1BA6NDE4 496 aaKnown RBP10.91□□□□□ -0.66
BRAT1-201ENST00000340611 RBMY1EA6NEQ0 496 aaKnown RBP10.91□□□□□ -0.66
BRAT1-201ENST00000340611 RBMY1DP0C7P1 496 aaKnown RBP10.91□□□□□ -0.66
BRAT1-201ENST00000340611 POLR2KP53803 58 aaKnown RBP10.91□□□□□ -0.66
BRAT1-201ENST00000340611 NOTCH1P46531 2555 aa10.91□□□□□ -0.66
BRAT1-201ENST00000340611 LINC00336Q6ZUF6 198 aa10.91□□□□□ -0.66
BRAT1-201ENST00000340611 PPP1R17O96001 155 aa10.91□□□□□ -0.66
BRAT1-201ENST00000340611 IGKV3D-7A0A0C4DH55 119 aa10.9□□□□□ -0.66
BRAT1-201ENST00000340611 HTN1P15515 57 aa10.9□□□□□ -0.66
BRAT1-201ENST00000340611 VCYO14598 125 aa10.9□□□□□ -0.66
BRAT1-201ENST00000340611 ZNF876PQ49A33 203 aa10.9□□□□□ -0.66
BRAT1-201ENST00000340611 A0A087WVE0 104 aa10.89□□□□□ -0.67
BRAT1-201ENST00000340611 TINCRA0A1B0GVN0 87 aa10.89□□□□□ -0.67
BRAT1-201ENST00000340611 LST1O00453 97 aa10.89□□□□□ -0.67
BRAT1-201ENST00000340611 IGLV1-51P01701 117 aa10.89□□□□□ -0.67
BRAT1-201ENST00000340611 TMEM258P61165 79 aa10.89□□□□□ -0.67
BRAT1-201ENST00000340611 DEFB121Q5J5C9 76 aa10.89□□□□□ -0.67
BRAT1-201ENST00000340611 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
BRAT1-201ENST00000340611 ATOX1O00244 68 aa10.88□□□□□ -0.67
BRAT1-201ENST00000340611 DAND5Q8N907 189 aa10.88□□□□□ -0.67
BRAT1-201ENST00000340611 TIMM17AQ99595 171 aa10.88□□□□□ -0.67
BRAT1-201ENST00000340611 RBMY1A1P0DJD3 496 aaKnown RBP10.88□□□□□ -0.67
BRAT1-201ENST00000340611 RBMY1CP0DJD4 496 aa10.88□□□□□ -0.67
BRAT1-201ENST00000340611 MED14OSP0DP75 135 aa10.88□□□□□ -0.67
BRAT1-201ENST00000340611 RBMY1FQ15415 496 aaKnown RBP10.88□□□□□ -0.67
BRAT1-201ENST00000340611 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
BRAT1-201ENST00000340611 A0A0J9YXY3 114 aa10.87□□□□□ -0.67
BRAT1-201ENST00000340611 CIRBPQ14011 172 aaKnown RBP10.87□□□□□ -0.67
BRAT1-201ENST00000340611 ATP5G1P05496 136 aa10.86□□□□□ -0.67
BRAT1-201ENST00000340611 ACYP1P07311 99 aa10.86□□□□□ -0.67
BRAT1-201ENST00000340611 PFN2P35080 140 aa10.86□□□□□ -0.67
BRAT1-201ENST00000340611 LINC01600Q96MT4 127 aa10.86□□□□□ -0.67
BRAT1-201ENST00000340611 A0A0J9YXV3 536 aa10.86□□□□□ -0.67
BRAT1-201ENST00000340611 KLLNB2CW77 178 aa10.86□□□□□ -0.67
BRAT1-201ENST00000340611 DAZ2Q13117 558 aaKnown RBP10.86□□□□□ -0.67
BRAT1-201ENST00000340611 DAZ4Q86SG3 579 aaKnown RBP10.86□□□□□ -0.67
BRAT1-201ENST00000340611 C5orf38Q86SI9 138 aa10.86□□□□□ -0.67
BRAT1-201ENST00000340611 DAZ3Q9NR90 486 aaKnown RBP10.86□□□□□ -0.67
BRAT1-201ENST00000340611 F8WDY8 70 aa10.85□□□□□ -0.67
BRAT1-201ENST00000340611 A0A0U1RQV1 116 aa10.85□□□□□ -0.67
BRAT1-201ENST00000340611 NXPH4O95158 308 aa10.85□□□□□ -0.67
BRAT1-201ENST00000340611 TIMM21Q9BVV7 248 aa10.85□□□□□ -0.67
BRAT1-201ENST00000340611 XCL2Q9UBD3 114 aa10.85□□□□□ -0.67
BRAT1-201ENST00000340611 A8MZ25 164 aa10.85□□□□□ -0.67
BRAT1-201ENST00000340611 LEPROTO15243 131 aa10.85□□□□□ -0.67
BRAT1-201ENST00000340611 IGHV3OR16-12A0A075B7B8 117 aa10.84□□□□□ -0.67
BRAT1-201ENST00000340611 TRBV27A0A0K0K1C4 114 aa10.84□□□□□ -0.67
BRAT1-201ENST00000340611 MALP21145 153 aa10.84□□□□□ -0.67
BRAT1-201ENST00000340611 PRO0628Q9UI54 55 aa10.84□□□□□ -0.67
BRAT1-201ENST00000340611 NBEAL1Q6ZS30 2694 aa10.83□□□□□ -0.68
BRAT1-201ENST00000340611 A0A0U1RRA0 63 aa10.83□□□□□ -0.68
BRAT1-201ENST00000340611 SEC61GP60059 68 aa10.83□□□□□ -0.68
BRAT1-201ENST00000340611 STHQ8IWL8 128 aa10.83□□□□□ -0.68
BRAT1-201ENST00000340611 CMYA5Q8N3K9 4069 aa10.82□□□□□ -0.68
BRAT1-201ENST00000340611 TIRAPP58753 221 aa10.82□□□□□ -0.68
BRAT1-201ENST00000340611 RPL18AQ02543 176 aaKnown RBP10.82□□□□□ -0.68
BRAT1-201ENST00000340611 OXLD1Q5BKU9 147 aa10.82□□□□□ -0.68
BRAT1-201ENST00000340611 C19orf73Q9NVV2 129 aa10.82□□□□□ -0.68
BRAT1-201ENST00000340611 FAM236DA0A1B0GTK5 79 aa10.81□□□□□ -0.68
BRAT1-201ENST00000340611 FAM236CP0DP71 79 aa10.81□□□□□ -0.68
BRAT1-201ENST00000340611 RNASE13Q5GAN3 156 aaKnown RBP10.81□□□□□ -0.68
BRAT1-201ENST00000340611 SERP2Q8N6R1 65 aa10.81□□□□□ -0.68
BRAT1-201ENST00000340611 M0QY20 66 aa10.8□□□□□ -0.68
BRAT1-201ENST00000340611 FHL2Q14192 279 aa10.8□□□□□ -0.68
BRAT1-201ENST00000340611 BEAN1Q3B7T3 259 aa10.8□□□□□ -0.68
BRAT1-201ENST00000340611 MGAM2Q2M2H8 2515 aa10.8□□□□□ -0.68
BRAT1-201ENST00000340611 BAALC-AS2P0C853 105 aa10.8□□□□□ -0.68
BRAT1-201ENST00000340611 CXCL5P42830 114 aa10.8□□□□□ -0.68
BRAT1-201ENST00000340611 UPK3BQ9BT76 320 aa10.79□□□□□ -0.68
BRAT1-201ENST00000340611 IGHV3-30-3P0DP02 117 aa10.79□□□□□ -0.68
BRAT1-201ENST00000340611 ANK2Q01484 3957 aa10.79□□□□□ -0.68
BRAT1-201ENST00000340611 IGLV4-3A0A075B6K6 122 aa10.78□□□□□ -0.68
BRAT1-201ENST00000340611 TRBV6-5A0A0K0K1A5 114 aa10.78□□□□□ -0.68
BRAT1-201ENST00000340611 ZNF415Q09FC8 603 aa10.78□□□□□ -0.68
BRAT1-201ENST00000340611 C20orf203Q8NBC4 194 aa10.78□□□□□ -0.68
BRAT1-201ENST00000340611 SPANXCQ9NY87 97 aa10.78□□□□□ -0.68
BRAT1-201ENST00000340611 IGHV3-73A0A0B4J1V6 119 aa10.78□□□□□ -0.68
BRAT1-201ENST00000340611 IGHV3-16A0A0C4DH30 117 aa10.78□□□□□ -0.68
BRAT1-201ENST00000340611 LITAFQ99732 161 aa10.78□□□□□ -0.68
BRAT1-201ENST00000340611 HIST1H4AP62805 103 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms