RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 CDKN2A-AS1Q9UH64 79 aa11.1□□□□□ -0.63
LIMK2-203ENST00000340552 LINC00846Q9NV44 126 aa11.09□□□□□ -0.63
LIMK2-203ENST00000340552 DNAL4O96015 105 aa11.09□□□□□ -0.63
LIMK2-203ENST00000340552 HOXD3P31249 432 aaPredicted RBP11.09□□□□□ -0.63
LIMK2-203ENST00000340552 CIRBPQ14011 172 aaKnown RBP11.09□□□□□ -0.63
LIMK2-203ENST00000340552 C14orf132Q9NPU4 83 aa11.08□□□□□ -0.64
LIMK2-203ENST00000340552 SONP18583 2426 aaKnown RBP11.08□□□□□ -0.64
LIMK2-203ENST00000340552 FLNAP21333 2647 aaKnown RBP11.07□□□□□ -0.64
LIMK2-203ENST00000340552 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.07□□□□□ -0.64
LIMK2-203ENST00000340552 Q9H8V8 135 aa11.07□□□□□ -0.64
LIMK2-203ENST00000340552 ZNF702PQ9H963 129 aa11.07□□□□□ -0.64
LIMK2-203ENST00000340552 TRAV12-2A0A075B6T6 113 aa11.06□□□□□ -0.64
LIMK2-203ENST00000340552 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
LIMK2-203ENST00000340552 ITPR2Q14571 2701 aa11.06□□□□□ -0.64
LIMK2-203ENST00000340552 PDZD2O15018 2839 aa11.06□□□□□ -0.64
LIMK2-203ENST00000340552 TMEM89A2RUT3 159 aa11.05□□□□□ -0.64
LIMK2-203ENST00000340552 IGHV3-73A0A0B4J1V6 119 aa11.05□□□□□ -0.64
LIMK2-203ENST00000340552 PROK1P58294 105 aa11.05□□□□□ -0.64
LIMK2-203ENST00000340552 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
LIMK2-203ENST00000340552 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
LIMK2-203ENST00000340552 Q9UF83 564 aa11.05□□□□□ -0.64
LIMK2-203ENST00000340552 CHCHD7Q9BUK0 85 aa11.04□□□□□ -0.64
LIMK2-203ENST00000340552 PFN2P35080 140 aa11.03□□□□□ -0.64
LIMK2-203ENST00000340552 IGKV3-20P01619 116 aa11.03□□□□□ -0.64
LIMK2-203ENST00000340552 COX6A2Q02221 97 aa11.03□□□□□ -0.64
LIMK2-203ENST00000340552 MYO9AB2RTY4 2548 aa11.02□□□□□ -0.64
LIMK2-203ENST00000340552 LINC00336Q6ZUF6 198 aa11.02□□□□□ -0.64
LIMK2-203ENST00000340552 RHPN1-AS1Q9BWJ2 59 aa11.02□□□□□ -0.64
LIMK2-203ENST00000340552 UNC79Q9P2D8 2635 aa11.02□□□□□ -0.64
LIMK2-203ENST00000340552 ACANP16112 2415 aa11.02□□□□□ -0.65
LIMK2-203ENST00000340552 EDN2P20800 178 aa11.02□□□□□ -0.65
LIMK2-203ENST00000340552 ZNF415Q09FC8 603 aa11.02□□□□□ -0.65
LIMK2-203ENST00000340552 HILS1P60008 231 aa11.01□□□□□ -0.65
LIMK2-203ENST00000340552 IGLV5-45A0A087WSX0 123 aa11.01□□□□□ -0.65
LIMK2-203ENST00000340552 PIK3CD-AS1Q5SR53 167 aa11.01□□□□□ -0.65
LIMK2-203ENST00000340552 LINC00467Q9BRT7 94 aa11.01□□□□□ -0.65
LIMK2-203ENST00000340552 A0A087WYN8 130 aa11□□□□□ -0.65
LIMK2-203ENST00000340552 HIST2H2BDQ6DRA6 164 aa11□□□□□ -0.65
LIMK2-203ENST00000340552 PRO0628Q9UI54 55 aa11□□□□□ -0.65
LIMK2-203ENST00000340552 IGHV1OR15-1A0A075B7D0 117 aa11□□□□□ -0.65
LIMK2-203ENST00000340552 IGLV5-39A0A0G2JS06 123 aa11□□□□□ -0.65
LIMK2-203ENST00000340552 K7EMT4 169 aa11□□□□□ -0.65
LIMK2-203ENST00000340552 OBSCN-AS1Q96MR7 158 aa10.99□□□□□ -0.65
LIMK2-203ENST00000340552 GCN1Q92616 2671 aaKnown RBP10.99□□□□□ -0.65
LIMK2-203ENST00000340552 NDUFC2O95298 119 aa10.99□□□□□ -0.65
LIMK2-203ENST00000340552 RPL28P46779 137 aaKnown RBP10.99□□□□□ -0.65
LIMK2-203ENST00000340552 KRTAP1-1Q07627 177 aa10.99□□□□□ -0.65
LIMK2-203ENST00000340552 COPS9Q8WXC6 57 aa10.99□□□□□ -0.65
LIMK2-203ENST00000340552 UBE2E2Q96LR5 201 aa10.99□□□□□ -0.65
LIMK2-203ENST00000340552 AKAP9Q99996 3911 aa10.98□□□□□ -0.65
LIMK2-203ENST00000340552 NDUFC2-KCTD14E9PQ53 114 aa10.98□□□□□ -0.65
LIMK2-203ENST00000340552 GHRHP01286 108 aa10.98□□□□□ -0.65
LIMK2-203ENST00000340552 TMEM86BQ8N661 226 aa10.98□□□□□ -0.65
LIMK2-203ENST00000340552 SORL1Q92673 2214 aa10.98□□□□□ -0.65
LIMK2-203ENST00000340552 TMEM243Q9BU79 118 aa10.98□□□□□ -0.65
LIMK2-203ENST00000340552 NCR3O14931 201 aa10.97□□□□□ -0.65
LIMK2-203ENST00000340552 SPINK13Q1W4C9 94 aa10.97□□□□□ -0.65
LIMK2-203ENST00000340552 WFDC9Q8NEX5 89 aa10.97□□□□□ -0.65
LIMK2-203ENST00000340552 FASNP49327 2511 aaKnown RBP10.96□□□□□ -0.65
LIMK2-203ENST00000340552 IGHV3-38A0A0C4DH36 116 aa10.96□□□□□ -0.66
LIMK2-203ENST00000340552 FAM236DA0A1B0GTK5 79 aa10.96□□□□□ -0.66
LIMK2-203ENST00000340552 EPM2AB3EWF7 344 aa10.96□□□□□ -0.66
LIMK2-203ENST00000340552 FAM236CP0DP71 79 aa10.96□□□□□ -0.66
LIMK2-203ENST00000340552 LINC00337Q8N6G1 96 aa10.96□□□□□ -0.66
LIMK2-203ENST00000340552 TRAV23DV6A0A075B6W5 121 aa10.95□□□□□ -0.66
LIMK2-203ENST00000340552 DNAJC9-AS1A6NH13 148 aa10.95□□□□□ -0.66
LIMK2-203ENST00000340552 KNCNA6PVL3 124 aa10.95□□□□□ -0.66
LIMK2-203ENST00000340552 Q6ZSN1 163 aa10.95□□□□□ -0.66
LIMK2-203ENST00000340552 C20orf197Q8N268 126 aa10.95□□□□□ -0.66
LIMK2-203ENST00000340552 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
LIMK2-203ENST00000340552 SMIM1B2RUZ4 78 aa10.95□□□□□ -0.66
LIMK2-203ENST00000340552 IGHV3OR16-12A0A075B7B8 117 aa10.94□□□□□ -0.66
LIMK2-203ENST00000340552 LINC00242Q5T6M2 205 aa10.94□□□□□ -0.66
LIMK2-203ENST00000340552 HECTD1Q9ULT8 2610 aa10.94□□□□□ -0.66
LIMK2-203ENST00000340552 CRPP02741 224 aa10.94□□□□□ -0.66
LIMK2-203ENST00000340552 C18orf65Q6ZTR6 163 aa10.94□□□□□ -0.66
LIMK2-203ENST00000340552 ESM1Q9NQ30 184 aa10.93□□□□□ -0.66
LIMK2-203ENST00000340552 IGKV2-28A0A075B6P5 120 aa10.93□□□□□ -0.66
LIMK2-203ENST00000340552 TRAV13-2A0A0B4J235 113 aa10.93□□□□□ -0.66
LIMK2-203ENST00000340552 RBMY1BA6NDE4 496 aaKnown RBP10.93□□□□□ -0.66
LIMK2-203ENST00000340552 RBMY1EA6NEQ0 496 aaKnown RBP10.93□□□□□ -0.66
LIMK2-203ENST00000340552 IGKV2D-28P01615 120 aa10.93□□□□□ -0.66
LIMK2-203ENST00000340552 RBMY1DP0C7P1 496 aaKnown RBP10.93□□□□□ -0.66
LIMK2-203ENST00000340552 RBMY1A1P0DJD3 496 aaKnown RBP10.93□□□□□ -0.66
LIMK2-203ENST00000340552 RBMY1CP0DJD4 496 aa10.93□□□□□ -0.66
LIMK2-203ENST00000340552 RPL35AP18077 110 aaKnown RBP10.93□□□□□ -0.66
LIMK2-203ENST00000340552 RBMY1FQ15415 496 aaKnown RBP10.93□□□□□ -0.66
LIMK2-203ENST00000340552 SMIM11BQ8TCY0 68 aa10.93□□□□□ -0.66
LIMK2-203ENST00000340552 ANK3Q12955 4377 aaKnown RBP10.92□□□□□ -0.66
LIMK2-203ENST00000340552 XCL1P47992 114 aa10.92□□□□□ -0.66
LIMK2-203ENST00000340552 DEFB136Q30KP8 78 aa10.92□□□□□ -0.66
LIMK2-203ENST00000340552 OVOL2Q9BRP0 275 aa10.92□□□□□ -0.66
LIMK2-203ENST00000340552 XCL2Q9UBD3 114 aa10.92□□□□□ -0.66
LIMK2-203ENST00000340552 MTORP42345 2549 aa10.92□□□□□ -0.66
LIMK2-203ENST00000340552 PF4P02776 101 aa10.92□□□□□ -0.66
LIMK2-203ENST00000340552 FAM19A1Q7Z5A9 133 aa10.92□□□□□ -0.66
LIMK2-203ENST00000340552 HTN1P15515 57 aa10.91□□□□□ -0.66
LIMK2-203ENST00000340552 KHDC1LQ5JSQ8 128 aa10.91□□□□□ -0.66
LIMK2-203ENST00000340552 PKIGQ9Y2B9 76 aa10.91□□□□□ -0.66
LIMK2-203ENST00000340552 SERP1Q9Y6X1 66 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms