RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 H3BQ85 93 aa9.11□□□□□ -0.95
LIN54-201ENST00000340417 KRTAP10-3P60369 221 aa9.11□□□□□ -0.95
LIN54-201ENST00000340417 CDC42SE2Q9NRR3 84 aa9.1□□□□□ -0.95
LIN54-201ENST00000340417 TRACP01848 142 aa9.09□□□□□ -0.95
LIN54-201ENST00000340417 IGLC3P0DOY3 106 aa9.09□□□□□ -0.95
LIN54-201ENST00000340417 MRPS36P82909 103 aaKnown RBP9.09□□□□□ -0.95
LIN54-201ENST00000340417 K7ERJ3 54 aa9.09□□□□□ -0.95
LIN54-201ENST00000340417 BAALC-AS2P0C853 105 aa9.09□□□□□ -0.95
LIN54-201ENST00000340417 ZNF22P17026 224 aaPredicted RBP9.08□□□□□ -0.96
LIN54-201ENST00000340417 RPL37AP8A6NKH3 93 aa9.08□□□□□ -0.96
LIN54-201ENST00000340417 ANKRD39Q53RE8 183 aa9.08□□□□□ -0.96
LIN54-201ENST00000340417 CYSRT1A8MQ03 144 aa9.08□□□□□ -0.96
LIN54-201ENST00000340417 C16orf90A8MZG2 172 aa9.08□□□□□ -0.96
LIN54-201ENST00000340417 POLR2KP53803 58 aaKnown RBP9.08□□□□□ -0.96
LIN54-201ENST00000340417 NRACQ8N912 160 aa9.08□□□□□ -0.96
LIN54-201ENST00000340417 SPANXCQ9NY87 97 aa9.08□□□□□ -0.96
LIN54-201ENST00000340417 X6R8D5 127 aa9.08□□□□□ -0.96
LIN54-201ENST00000340417 PPDPFQ9H3Y8 114 aa9.07□□□□□ -0.96
LIN54-201ENST00000340417 M0QXV9 152 aa9.07□□□□□ -0.96
LIN54-201ENST00000340417 ESRGQ1W209 222 aa9.07□□□□□ -0.96
LIN54-201ENST00000340417 DSCAML1Q8TD84 2053 aa9.07□□□□□ -0.96
LIN54-201ENST00000340417 MKI67P46013 3256 aaKnown RBP9.07□□□□□ -0.96
LIN54-201ENST00000340417 NUPR1O60356 82 aa9.07□□□□□ -0.96
LIN54-201ENST00000340417 ANKRD29Q8N6D5 301 aa9.06□□□□□ -0.96
LIN54-201ENST00000340417 RPL28P46779 137 aaKnown RBP9.06□□□□□ -0.96
LIN54-201ENST00000340417 TTTY13Q9BZ97 58 aa9.06□□□□□ -0.96
LIN54-201ENST00000340417 IGLV4-60A0A075B6I1 120 aa9.06□□□□□ -0.96
LIN54-201ENST00000340417 TMEM223A0PJW6 202 aa9.06□□□□□ -0.96
LIN54-201ENST00000340417 SPANXB1Q9NS25 103 aaPredicted RBP9.06□□□□□ -0.96
LIN54-201ENST00000340417 A0A0J9YXY3 114 aa9.05□□□□□ -0.96
LIN54-201ENST00000340417 M0R378 163 aa9.05□□□□□ -0.96
LIN54-201ENST00000340417 FAM229AH3BQW9 127 aa9.05□□□□□ -0.96
LIN54-201ENST00000340417 SPANXDQ9BXN6 97 aa9.05□□□□□ -0.96
LIN54-201ENST00000340417 K7EP13 123 aa9.05□□□□□ -0.96
LIN54-201ENST00000340417 PTH2Q96A98 100 aa9.04□□□□□ -0.96
LIN54-201ENST00000340417 SIGMAR1Q99720 223 aa9.04□□□□□ -0.96
LIN54-201ENST00000340417 OCIAD2Q56VL3 154 aa9.04□□□□□ -0.96
LIN54-201ENST00000340417 Q6ZSN1 163 aa9.04□□□□□ -0.96
LIN54-201ENST00000340417 NBDYA0A0U1RRE5 68 aa9.04□□□□□ -0.96
LIN54-201ENST00000340417 COX6A2Q02221 97 aa9.04□□□□□ -0.96
LIN54-201ENST00000340417 Q8IZM0 81 aa9.03□□□□□ -0.96
LIN54-201ENST00000340417 TRBV30A0A0K0K1B3 111 aa9.03□□□□□ -0.96
LIN54-201ENST00000340417 Q8NAQ8 132 aa9.03□□□□□ -0.96
LIN54-201ENST00000340417 LAMA3Q16787 3333 aa9.03□□□□□ -0.96
LIN54-201ENST00000340417 LINC01556Q5JQF7 62 aa9.03□□□□□ -0.96
LIN54-201ENST00000340417 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
LIN54-201ENST00000340417 EGFEM1PQ0D2K5 195 aa9.03□□□□□ -0.96
LIN54-201ENST00000340417 H0Y9J4 135 aa9.02□□□□□ -0.97
LIN54-201ENST00000340417 H3BNG1 76 aa9.02□□□□□ -0.97
LIN54-201ENST00000340417 UNQ6190/PRO20217Q6UXQ8 127 aa9.02□□□□□ -0.97
LIN54-201ENST00000340417 C11orf72Q8NBR9 251 aa9.02□□□□□ -0.97
LIN54-201ENST00000340417 CNFNQ9BYD5 112 aa9.02□□□□□ -0.97
LIN54-201ENST00000340417 TRAV23DV6A0A075B6W5 121 aa9.02□□□□□ -0.97
LIN54-201ENST00000340417 LOC105371267A0A1B0GV96 52 aa9.02□□□□□ -0.97
LIN54-201ENST00000340417 MTURNQ8N3F0 131 aa9.01□□□□□ -0.97
LIN54-201ENST00000340417 C9orf118A6NHY6 69 aa9.01□□□□□ -0.97
LIN54-201ENST00000340417 LINC00694P0DN24 101 aa9.01□□□□□ -0.97
LIN54-201ENST00000340417 A8MZ25 164 aa9.01□□□□□ -0.97
LIN54-201ENST00000340417 LINC00315P59091 139 aa9□□□□□ -0.97
LIN54-201ENST00000340417 IGLV9-49A0A0B4J1Y8 123 aa9□□□□□ -0.97
LIN54-201ENST00000340417 GAS8-AS1O95177 125 aa9□□□□□ -0.97
LIN54-201ENST00000340417 NREPQ16612 68 aa9□□□□□ -0.97
LIN54-201ENST00000340417 COX17Q14061 63 aa9□□□□□ -0.97
LIN54-201ENST00000340417 A0A1B0GUV1 79 aa8.99□□□□□ -0.97
LIN54-201ENST00000340417 AGRNO00468 2067 aa8.99□□□□□ -0.97
LIN54-201ENST00000340417 COA6Q5JTJ3 125 aaKnown RBP8.99□□□□□ -0.97
LIN54-201ENST00000340417 HRCT1Q6UXD1 115 aa8.99□□□□□ -0.97
LIN54-201ENST00000340417 C19orf73Q9NVV2 129 aa8.98□□□□□ -0.97
LIN54-201ENST00000340417 USP24Q9UPU5 2620 aa8.98□□□□□ -0.97
LIN54-201ENST00000340417 MRPL52Q86TS9 123 aaKnown RBP8.97□□□□□ -0.97
LIN54-201ENST00000340417 DHRS4-AS1Q9P1J3 65 aa8.97□□□□□ -0.97
LIN54-201ENST00000340417 TMEM256-PLSCR3K7ERE1 68 aa8.97□□□□□ -0.97
LIN54-201ENST00000340417 F8WDY8 70 aa8.97□□□□□ -0.97
LIN54-201ENST00000340417 LINC00308Q8TCZ7 52 aa8.97□□□□□ -0.97
LIN54-201ENST00000340417 CFAP46Q8IYW2 2715 aa8.97□□□□□ -0.97
LIN54-201ENST00000340417 LINC00588Q9Y4M8 146 aa8.97□□□□□ -0.97
LIN54-201ENST00000340417 RBM3P98179 157 aaKnown RBP8.96□□□□□ -0.97
LIN54-201ENST00000340417 LINC00242Q5T6M2 205 aa8.96□□□□□ -0.97
LIN54-201ENST00000340417 TRANK1O15050 2925 aa8.96□□□□□ -0.98
LIN54-201ENST00000340417 COX8CQ7Z4L0 72 aa8.96□□□□□ -0.98
LIN54-201ENST00000340417 C2orf48Q96LS8 159 aa8.96□□□□□ -0.98
LIN54-201ENST00000340417 C9orf116Q5BN46 136 aaPredicted RBP8.95□□□□□ -0.98
LIN54-201ENST00000340417 C6orf99Q4VX62 202 aa8.95□□□□□ -0.98
LIN54-201ENST00000340417 SPINK6Q6UWN8 80 aa8.95□□□□□ -0.98
LIN54-201ENST00000340417 SPATA12Q7Z6I5 190 aa8.95□□□□□ -0.98
LIN54-201ENST00000340417 A0A1W2PPM0 123 aa8.94□□□□□ -0.98
LIN54-201ENST00000340417 CLEC2BQ92478 149 aa8.94□□□□□ -0.98
LIN54-201ENST00000340417 HIGD1BQ9P298 99 aa8.94□□□□□ -0.98
LIN54-201ENST00000340417 H3BMG7 143 aa8.94□□□□□ -0.98
LIN54-201ENST00000340417 JMJD7-PLA2G4BH0Y9G9 81 aa8.94□□□□□ -0.98
LIN54-201ENST00000340417 RTL8CO15255 209 aa8.94□□□□□ -0.98
LIN54-201ENST00000340417 REG3GQ6UW15 175 aa8.94□□□□□ -0.98
LIN54-201ENST00000340417 ZNF292O60281 2723 aa8.94□□□□□ -0.98
LIN54-201ENST00000340417 CSDC2Q9Y534 153 aaKnown RBP8.93□□□□□ -0.98
LIN54-201ENST00000340417 XGP55808 180 aa8.93□□□□□ -0.98
LIN54-201ENST00000340417 C21orf62-AS1Q17RA5 79 aa8.93□□□□□ -0.98
LIN54-201ENST00000340417 PRRC2CQ9Y520 2896 aaKnown RBP8.92□□□□□ -0.98
LIN54-201ENST00000340417 NTN5Q8WTR8 489 aaPredicted RBP8.92□□□□□ -0.98
LIN54-201ENST00000340417 NDUFC2-KCTD14E9PQ53 114 aa8.92□□□□□ -0.98
LIN54-201ENST00000340417 TM2D3Q9BRN9 247 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms