RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 IGHV3-30-5P0DP03 117 aa2.47□□□□□ -2.01
CSMD3-202ENST00000339701 TRBV7-7A0A0K0K1E9 115 aa2.46□□□□□ -2.01
CSMD3-202ENST00000339701 PMAIP1Q13794 54 aa2.46□□□□□ -2.01
CSMD3-202ENST00000339701 ZNF22P17026 224 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-202ENST00000339701 ZNF837Q96EG3 531 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-202ENST00000339701 IGKV1-17P01599 117 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 IGLV1-47P01700 117 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 AGPAT4-IT1Q9H0P7 198 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 C5orf56Q8N8D9 126 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 C2orf48Q96LS8 159 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 SIRPDQ9H106 197 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 PRB2P02812 416 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-202ENST00000339701 RETNLBQ9BQ08 111 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 IGLV4-69A0A075B6H9 119 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-202ENST00000339701 NEXN-AS1Q8NBZ9 246 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 BPTFQ12830 3046 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 BBC3Q96PG8 261 aaPredicted RBP2.46□□□□□ -2.02
CSMD3-202ENST00000339701 G3V318 75 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 CFAP126Q5VTH2 177 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 APRG1Q8IVJ8 170 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 H3BNG1 76 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 CCKP06307 115 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 FRMD6-AS1P0C7T7 363 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 ZFAND2AQ8N6M9 145 aa2.46□□□□□ -2.02
CSMD3-202ENST00000339701 ODF3BA8MYP8 253 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 IGLC6P0CF74 106 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 ESRGQ1W209 222 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 LINC00308Q8TCZ7 52 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 C8orf49Q96NF6 230 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 PCNTO95613 3336 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 EPM2AB3EWF7 344 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 I3L2K1 104 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 IGHV4-30-4P0DP06 118 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 CLEC2BQ92478 149 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 MIR7-3HGQ8N6C7 128 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 IGHV3-64A0A075B6Q5 118 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 Q6ZSV7 163 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 C11orf1Q9H5F2 150 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 FAM167A-AS1Q96KT0 104 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 C16orf95Q9H693 158 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 H0Y9J4 135 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 Q6ZQT7 251 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 C9orf85Q96MD7 179 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 PRR13Q9NZ81 148 aa2.45□□□□□ -2.02
CSMD3-202ENST00000339701 A0A087WWL8 130 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 MDFIQ99750 246 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 IGKV2-24A0A0C4DH68 120 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 ZNF726P1Q15940 193 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 CEMP1Q6PRD7 247 aaPredicted RBP2.44□□□□□ -2.02
CSMD3-202ENST00000339701 CLPSL2Q6UWE3 100 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 LELP1Q5T871 98 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 NTM-AS1Q6ZSK4 140 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 MSRB1Q9NZV6 116 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 IGHV3-38A0A0C4DH36 116 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 C8orf87E5RJ46 101 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 C17orf58Q2M2W7 97 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 C10orf25Q5T742 122 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 C11orf71Q6IPW1 123 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 COX6B2Q6YFQ2 88 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 IGKV1-6A0A0C4DH72 117 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 NCR3O14931 201 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 DEFB4AO15263 64 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 SEM1Q6ZVN7 128 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 C6orf223Q8N319 242 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 KLK12Q9UKR0 248 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 PRM2P04554 102 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 TNP2Q05952 138 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 KPRPQ5T749 579 aaPredicted RBP2.44□□□□□ -2.02
CSMD3-202ENST00000339701 CFAP46Q8IYW2 2715 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 XGP55808 180 aa2.44□□□□□ -2.02
CSMD3-202ENST00000339701 NBEAL1Q6ZS30 2694 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 WFDC10AQ9H1F0 79 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 TRBV6-8A0A0A6YYG3 113 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 IGHV3-16A0A0C4DH30 117 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 Q8TAT8 98 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 ZNF625Q96I27 306 aaPredicted RBP2.43□□□□□ -2.02
CSMD3-202ENST00000339701 TEX49A0A1B0GTD5 131 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 ACYP2P14621 99 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 NANOS2P60321 138 aaKnown RBP2.43□□□□□ -2.02
CSMD3-202ENST00000339701 KRTAP21-3Q3LHN1 58 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 Q6ZR03 302 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 MOBPQ13875 183 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 AMELXQ99217 191 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 ZFAND3Q9H8U3 227 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 A0A0G2JRQ6 117 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 FXYD2P54710 66 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 LINC00269Q8N2A0 174 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 STAB2Q8WWQ8 2551 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 LOC101927531A0A1B0GV80 90 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 KLLNB2CW77 178 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 IGLV2-8P01709 118 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 RITA1Q96K30 269 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 COL6A5A8TX70 2615 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 UNC79Q9P2D8 2635 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 ZNF73O43830 326 aaPredicted RBP2.43□□□□□ -2.02
CSMD3-202ENST00000339701 SYCNQ0VAF6 134 aa2.43□□□□□ -2.02
CSMD3-202ENST00000339701 Q6ZSN1 163 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 CENPFP49454 3210 aa2.42□□□□□ -2.02
CSMD3-202ENST00000339701 IGHV7-81A0A0B4J1V7 117 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms