RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PRORYQ9H606 182 aa11.54□□□□□ -0.56
SCARB1-202ENST00000339570 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
SCARB1-202ENST00000339570 A0A096LPF7 62 aa11.53□□□□□ -0.56
SCARB1-202ENST00000339570 DEFB114Q30KQ6 69 aa11.53□□□□□ -0.56
SCARB1-202ENST00000339570 ODF3L2Q3SX64 289 aa11.53□□□□□ -0.56
SCARB1-202ENST00000339570 MIR7-3HGQ8N6C7 128 aa11.53□□□□□ -0.56
SCARB1-202ENST00000339570 C1orf158Q8N1D5 194 aa11.53□□□□□ -0.56
SCARB1-202ENST00000339570 SMCR5Q8TEV8 140 aa11.53□□□□□ -0.56
SCARB1-202ENST00000339570 COX7A2LO14548 114 aa11.52□□□□□ -0.57
SCARB1-202ENST00000339570 SLPIP03973 132 aa11.52□□□□□ -0.57
SCARB1-202ENST00000339570 Q6YL49 198 aa11.52□□□□□ -0.57
SCARB1-202ENST00000339570 RNASE1P07998 156 aaKnown RBP11.5□□□□□ -0.57
SCARB1-202ENST00000339570 K7EQD1 137 aa11.5□□□□□ -0.57
SCARB1-202ENST00000339570 HERV-K104P63124 156 aa11.5□□□□□ -0.57
SCARB1-202ENST00000339570 TIRAPP58753 221 aa11.49□□□□□ -0.57
SCARB1-202ENST00000339570 TRGV4A0A0C4DH28 118 aa11.48□□□□□ -0.57
SCARB1-202ENST00000339570 CRPP02741 224 aa11.48□□□□□ -0.57
SCARB1-202ENST00000339570 DEFB130BP0DP73 79 aa11.48□□□□□ -0.57
SCARB1-202ENST00000339570 DEFB130AP0DP74 79 aa11.48□□□□□ -0.57
SCARB1-202ENST00000339570 USP24Q9UPU5 2620 aa11.48□□□□□ -0.57
SCARB1-202ENST00000339570 C14orf132Q9NPU4 83 aa11.48□□□□□ -0.57
SCARB1-202ENST00000339570 IGKV3D-7A0A0C4DH55 119 aa11.48□□□□□ -0.57
SCARB1-202ENST00000339570 PAX4O43316 350 aa11.48□□□□□ -0.57
SCARB1-202ENST00000339570 IGHV4-31P0DP07 118 aa11.48□□□□□ -0.57
SCARB1-202ENST00000339570 C9orf129Q5T035 196 aaKnown RBP11.48□□□□□ -0.57
SCARB1-202ENST00000339570 CR1P17927 2039 aa11.48□□□□□ -0.57
SCARB1-202ENST00000339570 M0QXV9 152 aa11.47□□□□□ -0.57
SCARB1-202ENST00000339570 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
SCARB1-202ENST00000339570 DNAL4O96015 105 aa11.47□□□□□ -0.57
SCARB1-202ENST00000339570 CDC42SE2Q9NRR3 84 aa11.47□□□□□ -0.57
SCARB1-202ENST00000339570 LINC00337Q8N6G1 96 aa11.47□□□□□ -0.57
SCARB1-202ENST00000339570 DNAJC30Q96LL9 226 aa11.47□□□□□ -0.57
SCARB1-202ENST00000339570 KLK5Q9Y337 293 aaPredicted RBP11.47□□□□□ -0.57
SCARB1-202ENST00000339570 IGLV4-60A0A075B6I1 120 aa11.46□□□□□ -0.57
SCARB1-202ENST00000339570 A0A087WYN8 130 aa11.46□□□□□ -0.57
SCARB1-202ENST00000339570 TMEM243Q9BU79 118 aa11.46□□□□□ -0.57
SCARB1-202ENST00000339570 SDIM1Q6ZPB5 146 aa11.45□□□□□ -0.58
SCARB1-202ENST00000339570 IGLV5-39A0A0G2JS06 123 aa11.45□□□□□ -0.58
SCARB1-202ENST00000339570 HIST2H2BCQ6DN03 193 aa11.45□□□□□ -0.58
SCARB1-202ENST00000339570 TIMM17BO60830 172 aa11.44□□□□□ -0.58
SCARB1-202ENST00000339570 XCL1P47992 114 aa11.44□□□□□ -0.58
SCARB1-202ENST00000339570 ESM1Q9NQ30 184 aa11.44□□□□□ -0.58
SCARB1-202ENST00000339570 PRR3P79522 188 aaKnown RBP11.43□□□□□ -0.58
SCARB1-202ENST00000339570 BEAN1Q3B7T3 259 aa11.43□□□□□ -0.58
SCARB1-202ENST00000339570 LECT2O14960 151 aa11.43□□□□□ -0.58
SCARB1-202ENST00000339570 C9orf153Q5TBE3 101 aa11.43□□□□□ -0.58
SCARB1-202ENST00000339570 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
SCARB1-202ENST00000339570 C4orf3Q8WVX3 66 aa11.43□□□□□ -0.58
SCARB1-202ENST00000339570 IGLV5-45A0A087WSX0 123 aa11.42□□□□□ -0.58
SCARB1-202ENST00000339570 F5H768 121 aa11.42□□□□□ -0.58
SCARB1-202ENST00000339570 NCR3O14931 201 aa11.42□□□□□ -0.58
SCARB1-202ENST00000339570 SHISA2Q6UWI4 295 aa11.42□□□□□ -0.58
SCARB1-202ENST00000339570 SMIM11BQ8TCY0 68 aa11.42□□□□□ -0.58
SCARB1-202ENST00000339570 ITPR2Q14571 2701 aa11.42□□□□□ -0.58
SCARB1-202ENST00000339570 CCL24O00175 119 aa11.42□□□□□ -0.58
SCARB1-202ENST00000339570 Q6Q795 121 aa11.41□□□□□ -0.58
SCARB1-202ENST00000339570 DSCR9P59020 149 aa11.41□□□□□ -0.58
SCARB1-202ENST00000339570 EDA2RQ9HAV5 297 aa11.41□□□□□ -0.58
SCARB1-202ENST00000339570 A0A087WVE0 104 aa11.4□□□□□ -0.58
SCARB1-202ENST00000339570 A0A096LNT2 108 aa11.4□□□□□ -0.58
SCARB1-202ENST00000339570 MALP21145 153 aa11.4□□□□□ -0.58
SCARB1-202ENST00000339570 MRPL23Q16540 153 aaKnown RBP11.4□□□□□ -0.58
SCARB1-202ENST00000339570 IGKV2-28A0A075B6P5 120 aa11.4□□□□□ -0.59
SCARB1-202ENST00000339570 IGKV2D-28P01615 120 aa11.4□□□□□ -0.59
SCARB1-202ENST00000339570 C6orf226Q5I0X4 101 aa11.39□□□□□ -0.59
SCARB1-202ENST00000339570 IGLV10-54A0A075B6I4 117 aa11.39□□□□□ -0.59
SCARB1-202ENST00000339570 CCL18P55774 89 aa11.39□□□□□ -0.59
SCARB1-202ENST00000339570 VWFP04275 2813 aa11.39□□□□□ -0.59
SCARB1-202ENST00000339570 J3QLI3 93 aa11.38□□□□□ -0.59
SCARB1-202ENST00000339570 DEFB4AO15263 64 aa11.38□□□□□ -0.59
SCARB1-202ENST00000339570 C22orf24Q9Y442 160 aa11.37□□□□□ -0.59
SCARB1-202ENST00000339570 FAM240AA0A1B0GVK7 77 aa11.37□□□□□ -0.59
SCARB1-202ENST00000339570 WFDC9Q8NEX5 89 aa11.36□□□□□ -0.59
SCARB1-202ENST00000339570 COPS9Q8WXC6 57 aa11.36□□□□□ -0.59
SCARB1-202ENST00000339570 TRAV13-2A0A0B4J235 113 aa11.35□□□□□ -0.59
SCARB1-202ENST00000339570 LINC00643Q86TS7 51 aa11.35□□□□□ -0.59
SCARB1-202ENST00000339570 HIST1H4AP62805 103 aaKnown RBP11.35□□□□□ -0.59
SCARB1-202ENST00000339570 RNF152Q8N8N0 203 aa11.35□□□□□ -0.59
SCARB1-202ENST00000339570 LOC107984640A0A0U1RRK4 108 aa11.34□□□□□ -0.59
SCARB1-202ENST00000339570 DNAJC9-AS1A6NH13 148 aa11.34□□□□□ -0.59
SCARB1-202ENST00000339570 TRACP01848 142 aa11.34□□□□□ -0.59
SCARB1-202ENST00000339570 TRBV7-7A0A0K0K1E9 115 aa11.34□□□□□ -0.59
SCARB1-202ENST00000339570 DEFB121Q5J5C9 76 aa11.34□□□□□ -0.59
SCARB1-202ENST00000339570 WFDC11Q8NEX6 87 aa11.34□□□□□ -0.59
SCARB1-202ENST00000339570 A8MTW9 85 aa11.34□□□□□ -0.59
SCARB1-202ENST00000339570 SVIPQ8NHG7 77 aa11.34□□□□□ -0.59
SCARB1-202ENST00000339570 Q8N3U1 123 aa11.33□□□□□ -0.6
SCARB1-202ENST00000339570 LINC00526Q96FQ7 95 aa11.33□□□□□ -0.6
SCARB1-202ENST00000339570 TRBV10-1A0A0K0K1A3 114 aa11.33□□□□□ -0.6
SCARB1-202ENST00000339570 PPDPFQ9H3Y8 114 aa11.33□□□□□ -0.6
SCARB1-202ENST00000339570 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
SCARB1-202ENST00000339570 C9orf116Q5BN46 136 aaPredicted RBP11.32□□□□□ -0.6
SCARB1-202ENST00000339570 FASNP49327 2511 aaKnown RBP11.32□□□□□ -0.6
SCARB1-202ENST00000339570 LINC00846Q9NV44 126 aa11.31□□□□□ -0.6
SCARB1-202ENST00000339570 hADV29S1A0JD25 119 aa11.31□□□□□ -0.6
SCARB1-202ENST00000339570 ACYP1P07311 99 aa11.31□□□□□ -0.6
SCARB1-202ENST00000339570 INAFM2P0DMQ5 153 aa11.31□□□□□ -0.6
SCARB1-202ENST00000339570 BBC3Q96PG8 261 aaPredicted RBP11.3□□□□□ -0.6
SCARB1-202ENST00000339570 TRBV6-8A0A0A6YYG3 113 aa11.3□□□□□ -0.6
SCARB1-202ENST00000339570 GYPEP15421 78 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms