RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 ZNF702PQ9H963 129 aa12.23□□□□□ -0.45
SATB1-201ENST00000338745 A0A087WYN8 130 aa12.22□□□□□ -0.45
SATB1-201ENST00000338745 ZNF706Q9Y5V0 76 aaPredicted RBP12.22□□□□□ -0.45
SATB1-201ENST00000338745 C10orf25Q5T742 122 aa12.21□□□□□ -0.45
SATB1-201ENST00000338745 ZNF73O43830 326 aaPredicted RBP12.21□□□□□ -0.45
SATB1-201ENST00000338745 LOC107984640A0A0U1RRK4 108 aa12.21□□□□□ -0.45
SATB1-201ENST00000338745 RETNLBQ9BQ08 111 aa12.21□□□□□ -0.45
SATB1-201ENST00000338745 EDN2P20800 178 aa12.2□□□□□ -0.46
SATB1-201ENST00000338745 ZNF843Q8N446 348 aa12.2□□□□□ -0.46
SATB1-201ENST00000338745 Q6Q795 121 aa12.2□□□□□ -0.46
SATB1-201ENST00000338745 ESRGQ1W209 222 aa12.2□□□□□ -0.46
SATB1-201ENST00000338745 C11orf71Q6IPW1 123 aa12.2□□□□□ -0.46
SATB1-201ENST00000338745 LELP1Q5T871 98 aa12.19□□□□□ -0.46
SATB1-201ENST00000338745 C9orf116Q5BN46 136 aaPredicted RBP12.19□□□□□ -0.46
SATB1-201ENST00000338745 AGRNO00468 2067 aa12.19□□□□□ -0.46
SATB1-201ENST00000338745 RETNQ9HD89 108 aa12.19□□□□□ -0.46
SATB1-201ENST00000338745 PRR3P79522 188 aaKnown RBP12.19□□□□□ -0.46
SATB1-201ENST00000338745 PTPRBP23467 1997 aa12.18□□□□□ -0.46
SATB1-201ENST00000338745 TRAV10A0A0B4J240 114 aa12.18□□□□□ -0.46
SATB1-201ENST00000338745 KLLNB2CW77 178 aa12.18□□□□□ -0.46
SATB1-201ENST00000338745 Q8N814 137 aa12.18□□□□□ -0.46
SATB1-201ENST00000338745 TRAV7A0A075B6U4 112 aa12.18□□□□□ -0.46
SATB1-201ENST00000338745 CDC42SE2Q9NRR3 84 aa12.17□□□□□ -0.46
SATB1-201ENST00000338745 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.17□□□□□ -0.46
SATB1-201ENST00000338745 POLR2KP53803 58 aaKnown RBP12.16□□□□□ -0.46
SATB1-201ENST00000338745 A0A087WVE0 104 aa12.16□□□□□ -0.46
SATB1-201ENST00000338745 Q6ZVQ6 151 aa12.16□□□□□ -0.46
SATB1-201ENST00000338745 PSMG3-AS1Q96PY0 264 aa12.16□□□□□ -0.46
SATB1-201ENST00000338745 SPTAN1Q13813 2472 aaKnown RBP12.16□□□□□ -0.46
SATB1-201ENST00000338745 Q8IZM0 81 aa12.16□□□□□ -0.46
SATB1-201ENST00000338745 PMAIP1Q13794 54 aa12.15□□□□□ -0.46
SATB1-201ENST00000338745 IGIPA6NJ69 53 aa12.15□□□□□ -0.46
SATB1-201ENST00000338745 SMIM26A0A096LP01 95 aa12.15□□□□□ -0.46
SATB1-201ENST00000338745 PRYO14603 147 aa12.15□□□□□ -0.46
SATB1-201ENST00000338745 CYSRT1A8MQ03 144 aa12.15□□□□□ -0.47
SATB1-201ENST00000338745 EP300Q09472 2414 aaPredicted RBP12.14□□□□□ -0.47
SATB1-201ENST00000338745 PRR14LQ5THK1 2151 aa12.14□□□□□ -0.47
SATB1-201ENST00000338745 UBE2D2P62837 147 aa12.14□□□□□ -0.47
SATB1-201ENST00000338745 PSPHP1O15172 72 aa12.13□□□□□ -0.47
SATB1-201ENST00000338745 TSPEAR-AS2P59090 65 aa12.13□□□□□ -0.47
SATB1-201ENST00000338745 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
SATB1-201ENST00000338745 LY6G6DO95868 133 aa12.12□□□□□ -0.47
SATB1-201ENST00000338745 FSTL3O95633 263 aa12.12□□□□□ -0.47
SATB1-201ENST00000338745 Q8N6K4 173 aa12.12□□□□□ -0.47
SATB1-201ENST00000338745 URB1-AS1Q96HZ7 61 aa12.12□□□□□ -0.47
SATB1-201ENST00000338745 NTM-AS1Q6ZSK4 140 aa12.12□□□□□ -0.47
SATB1-201ENST00000338745 LINC00310P59036 64 aa12.11□□□□□ -0.47
SATB1-201ENST00000338745 REG3GQ6UW15 175 aa12.11□□□□□ -0.47
SATB1-201ENST00000338745 LINC00208Q96KT6 92 aa12.11□□□□□ -0.47
SATB1-201ENST00000338745 LY6G6CO95867 125 aa12.09□□□□□ -0.47
SATB1-201ENST00000338745 UNQ6190/PRO20217Q6UXQ8 127 aa12.09□□□□□ -0.47
SATB1-201ENST00000338745 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
SATB1-201ENST00000338745 IGHV6-1A0A0B4J1U7 121 aa12.09□□□□□ -0.47
SATB1-201ENST00000338745 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
SATB1-201ENST00000338745 TRBV7-6A0A0J9YX20 115 aa12.08□□□□□ -0.48
SATB1-201ENST00000338745 TRBV10-3A0A0K0K1G6 114 aa12.08□□□□□ -0.48
SATB1-201ENST00000338745 IGLV1-40P01703 118 aa12.08□□□□□ -0.48
SATB1-201ENST00000338745 DEFB116Q30KQ4 102 aa12.08□□□□□ -0.48
SATB1-201ENST00000338745 LINC00242Q5T6M2 205 aa12.08□□□□□ -0.48
SATB1-201ENST00000338745 C1orf137Q5JT78 98 aa12.07□□□□□ -0.48
SATB1-201ENST00000338745 ZNF580Q9UK33 172 aa12.07□□□□□ -0.48
SATB1-201ENST00000338745 PCOTHQ58A44 107 aa12.07□□□□□ -0.48
SATB1-201ENST00000338745 LINC01547P58512 204 aaPredicted RBP12.06□□□□□ -0.48
SATB1-201ENST00000338745 BEAN1Q3B7T3 259 aa12.06□□□□□ -0.48
SATB1-201ENST00000338745 CNFNQ9BYD5 112 aa12.06□□□□□ -0.48
SATB1-201ENST00000338745 SMIM1B2RUZ4 78 aa12.06□□□□□ -0.48
SATB1-201ENST00000338745 C6orf223Q8N319 242 aa12.06□□□□□ -0.48
SATB1-201ENST00000338745 X6R8D5 127 aa12.06□□□□□ -0.48
SATB1-201ENST00000338745 WNK1Q9H4A3 2382 aa12.06□□□□□ -0.48
SATB1-201ENST00000338745 PRRC2AP48634 2157 aaKnown RBP12.05□□□□□ -0.48
SATB1-201ENST00000338745 RPL28P46779 137 aaKnown RBP12.05□□□□□ -0.48
SATB1-201ENST00000338745 LINC01006Q8NI28 216 aa12.04□□□□□ -0.48
SATB1-201ENST00000338745 LINC00474Q9P2X8 69 aa12.04□□□□□ -0.48
SATB1-201ENST00000338745 IGLV4-60A0A075B6I1 120 aa12.04□□□□□ -0.48
SATB1-201ENST00000338745 MRGPRG-AS1Q2M3A8 158 aa12.03□□□□□ -0.48
SATB1-201ENST00000338745 LINC00575Q6W349 94 aa12.03□□□□□ -0.48
SATB1-201ENST00000338745 SHISA2Q6UWI4 295 aa12.03□□□□□ -0.48
SATB1-201ENST00000338745 MED13LQ71F56 2210 aa12.03□□□□□ -0.48
SATB1-201ENST00000338745 H0Y9P7 68 aa12.02□□□□□ -0.48
SATB1-201ENST00000338745 CRYGAP11844 174 aa12.02□□□□□ -0.49
SATB1-201ENST00000338745 SRCAPQ6ZRS2 3230 aa12.02□□□□□ -0.49
SATB1-201ENST00000338745 TRBV7-7A0A0K0K1E9 115 aa12.01□□□□□ -0.49
SATB1-201ENST00000338745 Q8N3U1 123 aa12□□□□□ -0.49
SATB1-201ENST00000338745 GVINP1Q7Z2Y8 2422 aa11.99□□□□□ -0.49
SATB1-201ENST00000338745 A8MTW9 85 aa11.99□□□□□ -0.49
SATB1-201ENST00000338745 CSDC2Q9Y534 153 aaKnown RBP11.99□□□□□ -0.49
SATB1-201ENST00000338745 SPINK1P00995 79 aa11.99□□□□□ -0.49
SATB1-201ENST00000338745 Q6ZSN1 163 aa11.99□□□□□ -0.49
SATB1-201ENST00000338745 Q9BRP9 147 aa11.98□□□□□ -0.49
SATB1-201ENST00000338745 SBSPONQ8IVN8 264 aa11.98□□□□□ -0.49
SATB1-201ENST00000338745 COL27A1Q8IZC6 1860 aaPredicted RBP11.97□□□□□ -0.49
SATB1-201ENST00000338745 OXLD1Q5BKU9 147 aa11.96□□□□□ -0.49
SATB1-201ENST00000338745 MUC7Q8TAX7 377 aa11.96□□□□□ -0.49
SATB1-201ENST00000338745 CACNA1GO43497 2377 aa11.95□□□□□ -0.5
SATB1-201ENST00000338745 Q9UF83 564 aa11.95□□□□□ -0.5
SATB1-201ENST00000338745 FHL2Q14192 279 aa11.95□□□□□ -0.5
SATB1-201ENST00000338745 CDSNQ15517 529 aa11.94□□□□□ -0.5
SATB1-201ENST00000338745 SORL1Q92673 2214 aa11.94□□□□□ -0.5
SATB1-201ENST00000338745 AMELXQ99217 191 aa11.94□□□□□ -0.5
SATB1-201ENST00000338745 LINC01556Q5JQF7 62 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms