RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 EDA2RQ9HAV5 297 aa8.54□□□□□ -1.04
RBM39-202ENST00000338163 IGHV3OR16-12A0A075B7B8 117 aa8.54□□□□□ -1.04
RBM39-202ENST00000338163 HERVK_113P63121 156 aa8.54□□□□□ -1.04
RBM39-202ENST00000338163 CYSRT1A8MQ03 144 aa8.53□□□□□ -1.04
RBM39-202ENST00000338163 UQCRQO14949 82 aa8.53□□□□□ -1.04
RBM39-202ENST00000338163 IGHV4-59P01825 116 aa8.53□□□□□ -1.04
RBM39-202ENST00000338163 CFHR3Q02985 330 aa8.53□□□□□ -1.04
RBM39-202ENST00000338163 F8P00451 2351 aa8.53□□□□□ -1.04
RBM39-202ENST00000338163 TEP1Q99973 2627 aaKnown RBP8.52□□□□□ -1.04
RBM39-202ENST00000338163 ZNF415Q09FC8 603 aa8.52□□□□□ -1.05
RBM39-202ENST00000338163 LINC00242Q5T6M2 205 aa8.52□□□□□ -1.05
RBM39-202ENST00000338163 SETD2Q9BYW2 2564 aaPredicted RBP8.52□□□□□ -1.05
RBM39-202ENST00000338163 DEFB136Q30KP8 78 aa8.52□□□□□ -1.05
RBM39-202ENST00000338163 WNK1Q9H4A3 2382 aa8.52□□□□□ -1.05
RBM39-202ENST00000338163 NIPBLQ6KC79 2804 aaeCLIP8.51□□□□□ -1.059e-8■□□□□ 8.9
RBM39-202ENST00000338163 SDIM1Q6ZPB5 146 aa8.51□□□□□ -1.05
RBM39-202ENST00000338163 J3QLI3 93 aa8.51□□□□□ -1.05
RBM39-202ENST00000338163 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 DNAL4O96015 105 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 IGHV3-53P01767 116 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 TRACP01848 142 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 COPS9Q8WXC6 57 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 JMJD1CQ15652 2540 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 INAFM2P0DMQ5 153 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 KRTAP1-1Q07627 177 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 NF1P21359 2839 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 IGKV3OR2-268A0A0C4DH90 116 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 RBMY1BA6NDE4 496 aaKnown RBP8.5□□□□□ -1.05
RBM39-202ENST00000338163 RBMY1EA6NEQ0 496 aaKnown RBP8.5□□□□□ -1.05
RBM39-202ENST00000338163 RBMY1DP0C7P1 496 aaKnown RBP8.5□□□□□ -1.05
RBM39-202ENST00000338163 LINC00526Q96FQ7 95 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 TOMM7Q9P0U1 55 aa8.5□□□□□ -1.05
RBM39-202ENST00000338163 IGLV5-45A0A087WSX0 123 aa8.49□□□□□ -1.05
RBM39-202ENST00000338163 IGKV3D-7A0A0C4DH55 119 aa8.49□□□□□ -1.05
RBM39-202ENST00000338163 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
RBM39-202ENST00000338163 CRPP02741 224 aa8.49□□□□□ -1.05
RBM39-202ENST00000338163 C14orf132Q9NPU4 83 aa8.49□□□□□ -1.05
RBM39-202ENST00000338163 PEMTQ9UBM1 199 aa8.49□□□□□ -1.05
RBM39-202ENST00000338163 BEAN1Q3B7T3 259 aa8.49□□□□□ -1.05
RBM39-202ENST00000338163 hADV29S1A0JD25 119 aa8.48□□□□□ -1.05
RBM39-202ENST00000338163 MALP21145 153 aa8.48□□□□□ -1.05
RBM39-202ENST00000338163 DNAJC30Q96LL9 226 aa8.48□□□□□ -1.05
RBM39-202ENST00000338163 NSD1Q96L73 2696 aaPredicted RBP8.48□□□□□ -1.05
RBM39-202ENST00000338163 SLURP1P55000 103 aa8.48□□□□□ -1.05
RBM39-202ENST00000338163 HIST2H2BDQ6DRA6 164 aa8.48□□□□□ -1.05
RBM39-202ENST00000338163 C22orf24Q9Y442 160 aa8.48□□□□□ -1.05
RBM39-202ENST00000338163 TRGV1A0A0A0MS02 117 aa8.47□□□□□ -1.05
RBM39-202ENST00000338163 LY6G6DO95868 133 aa8.47□□□□□ -1.05
RBM39-202ENST00000338163 COX7CP15954 63 aa8.47□□□□□ -1.05
RBM39-202ENST00000338163 DEFB112Q30KQ8 113 aa8.47□□□□□ -1.05
RBM39-202ENST00000338163 KHDC1LQ5JSQ8 128 aa8.47□□□□□ -1.05
RBM39-202ENST00000338163 XCL2Q9UBD3 114 aa8.47□□□□□ -1.05
RBM39-202ENST00000338163 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.05
RBM39-202ENST00000338163 ATP5G1P05496 136 aa8.46□□□□□ -1.05
RBM39-202ENST00000338163 C9orf129Q5T035 196 aaKnown RBP8.46□□□□□ -1.05
RBM39-202ENST00000338163 A0A087WVE0 104 aa8.46□□□□□ -1.06
RBM39-202ENST00000338163 MIR7-3HGQ8N6C7 128 aa8.46□□□□□ -1.06
RBM39-202ENST00000338163 CSDC2Q9Y534 153 aaKnown RBP8.46□□□□□ -1.06
RBM39-202ENST00000338163 A0A087WYN8 130 aa8.45□□□□□ -1.06
RBM39-202ENST00000338163 C18orf65Q6ZTR6 163 aa8.45□□□□□ -1.06
RBM39-202ENST00000338163 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
RBM39-202ENST00000338163 UBE2E2Q96LR5 201 aa8.45□□□□□ -1.06
RBM39-202ENST00000338163 A0A1B0GX51 115 aa8.45□□□□□ -1.06
RBM39-202ENST00000338163 J3KT08 172 aa8.45□□□□□ -1.06
RBM39-202ENST00000338163 CXCL5P42830 114 aa8.45□□□□□ -1.06
RBM39-202ENST00000338163 LINC00337Q8N6G1 96 aa8.45□□□□□ -1.06
RBM39-202ENST00000338163 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
RBM39-202ENST00000338163 LINC00158P58513 81 aa8.44□□□□□ -1.06
RBM39-202ENST00000338163 C11orf72Q8NBR9 251 aa8.44□□□□□ -1.06
RBM39-202ENST00000338163 TRAV13-2A0A0B4J235 113 aa8.44□□□□□ -1.06
RBM39-202ENST00000338163 ATOX1O00244 68 aa8.44□□□□□ -1.06
RBM39-202ENST00000338163 FAM19A5Q7Z5A7 132 aaPredicted RBP8.44□□□□□ -1.06
RBM39-202ENST00000338163 CYSTM1Q9H1C7 97 aa8.44□□□□□ -1.06
RBM39-202ENST00000338163 UBE2L6O14933 153 aa8.44□□□□□ -1.06
RBM39-202ENST00000338163 FSHBP01225 129 aa8.44□□□□□ -1.06
RBM39-202ENST00000338163 INSP01308 110 aa8.44□□□□□ -1.06
RBM39-202ENST00000338163 RPL36AP83881 106 aaKnown RBP8.44□□□□□ -1.06
RBM39-202ENST00000338163 FAM222AQ5U5X8 452 aa8.44□□□□□ -1.06
RBM39-202ENST00000338163 OR13C6PQ8NH95 151 aa8.44□□□□□ -1.06
RBM39-202ENST00000338163 RPL36ALQ969Q0 106 aaKnown RBP8.44□□□□□ -1.06
RBM39-202ENST00000338163 FN1P02751 2386 aaKnown RBP8.43□□□□□ -1.06
RBM39-202ENST00000338163 TMEM89A2RUT3 159 aa8.43□□□□□ -1.06
RBM39-202ENST00000338163 SLPIP03973 132 aa8.43□□□□□ -1.06
RBM39-202ENST00000338163 NTM-AS1Q6ZSK4 140 aa8.43□□□□□ -1.06
RBM39-202ENST00000338163 SMIM11BQ8TCY0 68 aa8.43□□□□□ -1.06
RBM39-202ENST00000338163 DYNLRB2Q8TF09 96 aa8.43□□□□□ -1.06
RBM39-202ENST00000338163 F5H768 121 aa8.42□□□□□ -1.06
RBM39-202ENST00000338163 NCR3O14931 201 aa8.42□□□□□ -1.06
RBM39-202ENST00000338163 LECT2O14960 151 aa8.42□□□□□ -1.06
RBM39-202ENST00000338163 PFN2P35080 140 aa8.42□□□□□ -1.06
RBM39-202ENST00000338163 INAFM1C9JVW0 142 aa8.42□□□□□ -1.06
RBM39-202ENST00000338163 RPL28P46779 137 aaKnown RBP8.42□□□□□ -1.06
RBM39-202ENST00000338163 C2orf48Q96LS8 159 aa8.42□□□□□ -1.06
RBM39-202ENST00000338163 C11orf68Q9H3H3 251 aaKnown RBP8.42□□□□□ -1.06
RBM39-202ENST00000338163 LINC00846Q9NV44 126 aa8.42□□□□□ -1.06
RBM39-202ENST00000338163 HIST1H4AP62805 103 aaKnown RBP8.41□□□□□ -1.06
RBM39-202ENST00000338163 MAP6D1Q9H9H5 199 aa8.41□□□□□ -1.06
RBM39-202ENST00000338163 CDC42SE2Q9NRR3 84 aa8.41□□□□□ -1.06
RBM39-202ENST00000338163 IGKV2-28A0A075B6P5 120 aa8.41□□□□□ -1.06
RBM39-202ENST00000338163 IGKV2D-28P01615 120 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 190.1 ms