RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 UBE2D1P51668 147 aa7.84□□□□□ -1.15
SPTLC1-202ENST00000337841 NDUFA6P56556 154 aa7.84□□□□□ -1.15
SPTLC1-202ENST00000337841 WFDC2Q14508 124 aa7.84□□□□□ -1.15
SPTLC1-202ENST00000337841 ZC2HC1BQ5TFG8 222 aa7.84□□□□□ -1.15
SPTLC1-202ENST00000337841 FAM19A2Q8N3H0 131 aa7.84□□□□□ -1.15
SPTLC1-202ENST00000337841 CST9LQ9H4G1 147 aa7.84□□□□□ -1.15
SPTLC1-202ENST00000337841 DNAH10Q8IVF4 4471 aa7.83□□□□□ -1.16
SPTLC1-202ENST00000337841 IGHV1-58A0A0C4DH39 117 aa7.83□□□□□ -1.16
SPTLC1-202ENST00000337841 APOMO95445 188 aa7.83□□□□□ -1.16
SPTLC1-202ENST00000337841 PRSS1P07477 247 aa7.83□□□□□ -1.16
SPTLC1-202ENST00000337841 LINC00242Q5T6M2 205 aa7.83□□□□□ -1.16
SPTLC1-202ENST00000337841 CDPF1Q6NVV7 123 aa7.83□□□□□ -1.16
SPTLC1-202ENST00000337841 LINC00173Q6ZV60 143 aa7.83□□□□□ -1.16
SPTLC1-202ENST00000337841 C5orf38Q86SI9 138 aa7.83□□□□□ -1.16
SPTLC1-202ENST00000337841 GEMIN7Q9H840 131 aaKnown RBP7.83□□□□□ -1.16
SPTLC1-202ENST00000337841 IGLV5-52A0A0A0MRZ9 124 aa7.82□□□□□ -1.16
SPTLC1-202ENST00000337841 IGHV3OR16-9A0A0B4J2B5 98 aa7.82□□□□□ -1.16
SPTLC1-202ENST00000337841 hDV102S1A0JD36 115 aa7.82□□□□□ -1.16
SPTLC1-202ENST00000337841 KRTAP10-2P60368 255 aa7.82□□□□□ -1.16
SPTLC1-202ENST00000337841 DNAH2Q9P225 4427 aa7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 C16orf90A8MZG2 172 aa7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 FAM229AH3BQW9 127 aa7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 NUPR1O60356 82 aa7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 LEPROTL1O95214 131 aa7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 HERVK_113P63121 156 aa7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 FAM19A3Q7Z5A8 133 aa7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 IFI27L1Q96BM0 104 aa7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 HSPB8Q9UJY1 196 aa7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 DNAH17Q9UFH2 4485 aa7.81□□□□□ -1.16
SPTLC1-202ENST00000337841 A0A0J9YXV3 536 aa7.8□□□□□ -1.16
SPTLC1-202ENST00000337841 TINCRA0A1B0GVN0 87 aa7.8□□□□□ -1.16
SPTLC1-202ENST00000337841 ZNF561-AS1K7EIQ3 104 aa7.8□□□□□ -1.16
SPTLC1-202ENST00000337841 LINC00310P59036 64 aa7.8□□□□□ -1.16
SPTLC1-202ENST00000337841 COX6A2Q02221 97 aa7.8□□□□□ -1.16
SPTLC1-202ENST00000337841 LINC01561Q8N1V8 128 aa7.8□□□□□ -1.16
SPTLC1-202ENST00000337841 A0A087WZ39 114 aa7.79□□□□□ -1.16
SPTLC1-202ENST00000337841 GVQW2A0A096LPI5 108 aaPredicted RBP7.79□□□□□ -1.16
SPTLC1-202ENST00000337841 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.79□□□□□ -1.16
SPTLC1-202ENST00000337841 FABP4P15090 132 aa7.79□□□□□ -1.16
SPTLC1-202ENST00000337841 GCSHP23434 173 aa7.79□□□□□ -1.16
SPTLC1-202ENST00000337841 HIGD2BQ4VC39 106 aa7.79□□□□□ -1.16
SPTLC1-202ENST00000337841 C15orf56Q8N910 161 aa7.79□□□□□ -1.16
SPTLC1-202ENST00000337841 FUSP35637 526 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPTLC1-202ENST00000337841 COA6Q5JTJ3 125 aaKnown RBP7.78□□□□□ -1.16
SPTLC1-202ENST00000337841 IGHV3-64A0A075B6Q5 118 aa7.77□□□□□ -1.17
SPTLC1-202ENST00000337841 TRAV12-1A0A0B4J245 112 aa7.77□□□□□ -1.17
SPTLC1-202ENST00000337841 TMEM238LA0A1B0GVL6 79 aa7.77□□□□□ -1.17
SPTLC1-202ENST00000337841 LINC00469Q8N7U9 141 aa7.77□□□□□ -1.17
SPTLC1-202ENST00000337841 OR10D4PQ8NGN7 298 aa7.77□□□□□ -1.17
SPTLC1-202ENST00000337841 PACRGQ96M98 296 aaPredicted RBP7.77□□□□□ -1.17
SPTLC1-202ENST00000337841 CHTOPQ9Y3Y2 248 aaKnown RBP7.77□□□□□ -1.17
SPTLC1-202ENST00000337841 F8WDY8 70 aa7.76□□□□□ -1.17
SPTLC1-202ENST00000337841 H3BRM9 83 aa7.76□□□□□ -1.17
SPTLC1-202ENST00000337841 IGLC3P0DOY3 106 aa7.76□□□□□ -1.17
SPTLC1-202ENST00000337841 CNBPP62633 177 aaKnown RBP7.76□□□□□ -1.17
SPTLC1-202ENST00000337841 ORAOV1Q8WV07 137 aa7.76□□□□□ -1.17
SPTLC1-202ENST00000337841 MAP1LC3CQ9BXW4 147 aa7.76□□□□□ -1.17
SPTLC1-202ENST00000337841 CDKN2A-AS1Q9UH64 79 aa7.76□□□□□ -1.17
SPTLC1-202ENST00000337841 IGLV4-69A0A075B6H9 119 aa7.75□□□□□ -1.17
SPTLC1-202ENST00000337841 S100A6P06703 90 aa7.75□□□□□ -1.17
SPTLC1-202ENST00000337841 PRSS2P07478 247 aa7.75□□□□□ -1.17
SPTLC1-202ENST00000337841 SPAG11BQ08648 103 aa7.75□□□□□ -1.17
SPTLC1-202ENST00000337841 C9orf163Q8N9P6 203 aa7.75□□□□□ -1.17
SPTLC1-202ENST00000337841 C2orf48Q96LS8 159 aa7.75□□□□□ -1.17
SPTLC1-202ENST00000337841 IGLV5-45A0A087WSX0 123 aa7.74□□□□□ -1.17
SPTLC1-202ENST00000337841 H0Y8G0 127 aa7.74□□□□□ -1.17
SPTLC1-202ENST00000337841 SYCNQ0VAF6 134 aa7.74□□□□□ -1.17
SPTLC1-202ENST00000337841 LINC00526Q96FQ7 95 aa7.74□□□□□ -1.17
SPTLC1-202ENST00000337841 CAMK2N2Q96S95 79 aa7.74□□□□□ -1.17
SPTLC1-202ENST00000337841 CHAC1Q9BUX1 264 aa7.74□□□□□ -1.17
SPTLC1-202ENST00000337841 FRAS1Q86XX4 4008 aa7.73□□□□□ -1.17
SPTLC1-202ENST00000337841 F8VRH5 84 aa7.73□□□□□ -1.17
SPTLC1-202ENST00000337841 SLPIP03973 132 aa7.73□□□□□ -1.17
SPTLC1-202ENST00000337841 C6orf226Q5I0X4 101 aa7.73□□□□□ -1.17
SPTLC1-202ENST00000337841 FAT2Q9NYQ8 4349 aa7.72□□□□□ -1.17
SPTLC1-202ENST00000337841 KRTAP10-1P60331 282 aa7.72□□□□□ -1.17
SPTLC1-202ENST00000337841 TMEM170BQ5T4T1 132 aa7.72□□□□□ -1.17
SPTLC1-202ENST00000337841 CARD19Q96LW7 228 aa7.72□□□□□ -1.17
SPTLC1-202ENST00000337841 MRPL35Q9NZE8 188 aaKnown RBP7.72□□□□□ -1.17
SPTLC1-202ENST00000337841 TOMM7Q9P0U1 55 aa7.72□□□□□ -1.17
SPTLC1-202ENST00000337841 PKIGQ9Y2B9 76 aa7.72□□□□□ -1.17
SPTLC1-202ENST00000337841 C11orf86A6NJI1 115 aa7.71□□□□□ -1.18
SPTLC1-202ENST00000337841 NDUFA1O15239 70 aa7.71□□□□□ -1.18
SPTLC1-202ENST00000337841 ZNF22P17026 224 aaPredicted RBP7.71□□□□□ -1.18
SPTLC1-202ENST00000337841 CKS1BP61024 79 aa7.71□□□□□ -1.18
SPTLC1-202ENST00000337841 KIAA0087Q14695 138 aa7.71□□□□□ -1.18
SPTLC1-202ENST00000337841 LINC01620Q4KN68 170 aa7.71□□□□□ -1.18
SPTLC1-202ENST00000337841 SMIM1B2RUZ4 78 aa7.7□□□□□ -1.18
SPTLC1-202ENST00000337841 SYS1-DBNDD2H3BUS1 97 aa7.7□□□□□ -1.18
SPTLC1-202ENST00000337841 SPINK8P0C7L1 97 aa7.7□□□□□ -1.18
SPTLC1-202ENST00000337841 S100A2P29034 98 aa7.7□□□□□ -1.18
SPTLC1-202ENST00000337841 ODF1Q14990 250 aa7.7□□□□□ -1.18
SPTLC1-202ENST00000337841 RNF151Q2KHN1 245 aa7.7□□□□□ -1.18
SPTLC1-202ENST00000337841 SDIM1Q6ZPB5 146 aa7.7□□□□□ -1.18
SPTLC1-202ENST00000337841 Q8IZM0 81 aa7.7□□□□□ -1.18
SPTLC1-202ENST00000337841 DPM2O94777 84 aa7.69□□□□□ -1.18
SPTLC1-202ENST00000337841 PLNP26678 52 aa7.69□□□□□ -1.18
SPTLC1-202ENST00000337841 PET117Q6UWS5 81 aa7.69□□□□□ -1.18
SPTLC1-202ENST00000337841 Q6ZRU5 148 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms