RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 NPC2P61916 151 aa10.16□□□□□ -0.78
ARHGEF1-201ENST00000337665 Q9H8V8 135 aa10.16□□□□□ -0.78
ARHGEF1-201ENST00000337665 ICOSQ9Y6W8 199 aa10.16□□□□□ -0.78
ARHGEF1-201ENST00000337665 UNC79Q9P2D8 2635 aa10.15□□□□□ -0.78
ARHGEF1-201ENST00000337665 SLC25A20O43772 301 aa10.15□□□□□ -0.78
ARHGEF1-201ENST00000337665 ATXN8Q156A1 80 aa10.15□□□□□ -0.78
ARHGEF1-201ENST00000337665 Q1RN00 199 aa10.15□□□□□ -0.78
ARHGEF1-201ENST00000337665 ANKRD29Q8N6D5 301 aa10.15□□□□□ -0.78
ARHGEF1-201ENST00000337665 DAND5Q8N907 189 aa10.15□□□□□ -0.78
ARHGEF1-201ENST00000337665 JMJD1CQ15652 2540 aa10.15□□□□□ -0.78
ARHGEF1-201ENST00000337665 LINC00612Q8N6U2 182 aa10.15□□□□□ -0.78
ARHGEF1-201ENST00000337665 UBE2L6O14933 153 aa10.14□□□□□ -0.79
ARHGEF1-201ENST00000337665 CDIP1Q9H305 208 aa10.14□□□□□ -0.79
ARHGEF1-201ENST00000337665 TRGV4A0A0C4DH28 118 aa10.14□□□□□ -0.79
ARHGEF1-201ENST00000337665 C9JAW5 83 aa10.14□□□□□ -0.79
ARHGEF1-201ENST00000337665 LINC00308Q8TCZ7 52 aa10.14□□□□□ -0.79
ARHGEF1-201ENST00000337665 CIRBPQ14011 172 aaKnown RBP10.14□□□□□ -0.79
ARHGEF1-201ENST00000337665 SETD2Q9BYW2 2564 aaPredicted RBP10.13□□□□□ -0.79
ARHGEF1-201ENST00000337665 NOTCH3Q9UM47 2321 aa10.13□□□□□ -0.79
ARHGEF1-201ENST00000337665 LINC01620Q4KN68 170 aa10.13□□□□□ -0.79
ARHGEF1-201ENST00000337665 MTORP42345 2549 aa10.13□□□□□ -0.79
ARHGEF1-201ENST00000337665 SCGB1A1P11684 91 aa10.13□□□□□ -0.79
ARHGEF1-201ENST00000337665 KIR2DL5BQ8NHK3 375 aa10.13□□□□□ -0.79
ARHGEF1-201ENST00000337665 TRBV6-8A0A0A6YYG3 113 aa10.12□□□□□ -0.79
ARHGEF1-201ENST00000337665 PPDPFQ9H3Y8 114 aa10.12□□□□□ -0.79
ARHGEF1-201ENST00000337665 HELZ2Q9BYK8 2649 aaKnown RBP10.12□□□□□ -0.79
ARHGEF1-201ENST00000337665 LY6G6DO95868 133 aa10.12□□□□□ -0.79
ARHGEF1-201ENST00000337665 SOSTDC1Q6X4U4 206 aa10.12□□□□□ -0.79
ARHGEF1-201ENST00000337665 SMIM20Q8N5G0 67 aa10.12□□□□□ -0.79
ARHGEF1-201ENST00000337665 B5MCH6 92 aa10.11□□□□□ -0.79
ARHGEF1-201ENST00000337665 RPL13AP40429 203 aaKnown RBP10.11□□□□□ -0.79
ARHGEF1-201ENST00000337665 IGLV4-60A0A075B6I1 120 aa10.1□□□□□ -0.79
ARHGEF1-201ENST00000337665 TRBV10-2A0A0K0K1G8 114 aa10.1□□□□□ -0.79
ARHGEF1-201ENST00000337665 PF4P02776 101 aa10.1□□□□□ -0.79
ARHGEF1-201ENST00000337665 GAGE6Q13070 117 aa10.1□□□□□ -0.79
ARHGEF1-201ENST00000337665 X6R8D5 127 aa10.1□□□□□ -0.79
ARHGEF1-201ENST00000337665 CRLF1O75462 422 aa10.09□□□□□ -0.79
ARHGEF1-201ENST00000337665 PRIMA1Q86XR5 153 aa10.09□□□□□ -0.79
ARHGEF1-201ENST00000337665 SPATA3Q8NHX4 192 aa10.08□□□□□ -0.8
ARHGEF1-201ENST00000337665 COPS9Q8WXC6 57 aa10.08□□□□□ -0.8
ARHGEF1-201ENST00000337665 LST1O00453 97 aa10.07□□□□□ -0.8
ARHGEF1-201ENST00000337665 COX6CP09669 75 aa10.07□□□□□ -0.8
ARHGEF1-201ENST00000337665 CITED1Q99966 193 aa10.07□□□□□ -0.8
ARHGEF1-201ENST00000337665 IGHV3OR16-9A0A0B4J2B5 98 aa10.07□□□□□ -0.8
ARHGEF1-201ENST00000337665 CLEC2BQ92478 149 aa10.07□□□□□ -0.8
ARHGEF1-201ENST00000337665 SMIM9A6NGZ8 99 aa10.06□□□□□ -0.8
ARHGEF1-201ENST00000337665 DEFB130BP0DP73 79 aa10.06□□□□□ -0.8
ARHGEF1-201ENST00000337665 DEFB130AP0DP74 79 aa10.06□□□□□ -0.8
ARHGEF1-201ENST00000337665 COX7B2Q8TF08 81 aa10.06□□□□□ -0.8
ARHGEF1-201ENST00000337665 A0A0U1RRA0 63 aa10.06□□□□□ -0.8
ARHGEF1-201ENST00000337665 C3orf56Q8N813 242 aa10.05□□□□□ -0.8
ARHGEF1-201ENST00000337665 MEIG1Q5JSS6 88 aa10.05□□□□□ -0.8
ARHGEF1-201ENST00000337665 CHCHD5Q9BSY4 110 aa10.05□□□□□ -0.8
ARHGEF1-201ENST00000337665 OTOGQ6ZRI0 2925 aa10.04□□□□□ -0.8
ARHGEF1-201ENST00000337665 FASNP49327 2511 aaKnown RBP10.04□□□□□ -0.8
ARHGEF1-201ENST00000337665 NTN5Q8WTR8 489 aaPredicted RBP10.04□□□□□ -0.8
ARHGEF1-201ENST00000337665 A0A087WZ39 114 aa10.04□□□□□ -0.8
ARHGEF1-201ENST00000337665 VWFP04275 2813 aa10.04□□□□□ -0.8
ARHGEF1-201ENST00000337665 H3BT86 120 aa10.03□□□□□ -0.8
ARHGEF1-201ENST00000337665 XGP55808 180 aa10.03□□□□□ -0.8
ARHGEF1-201ENST00000337665 HIVEP2P31629 2446 aa10.03□□□□□ -0.8
ARHGEF1-201ENST00000337665 GYPEP15421 78 aa10.03□□□□□ -0.8
ARHGEF1-201ENST00000337665 C9orf66Q5T8R8 295 aa10.03□□□□□ -0.8
ARHGEF1-201ENST00000337665 GCN1Q92616 2671 aaKnown RBP10.02□□□□□ -0.81
ARHGEF1-201ENST00000337665 TEX49A0A1B0GTD5 131 aa10.02□□□□□ -0.81
ARHGEF1-201ENST00000337665 LINC00959A0A1B0GUT2 108 aa10.02□□□□□ -0.81
ARHGEF1-201ENST00000337665 A0A1B0GUV1 79 aa10.02□□□□□ -0.81
ARHGEF1-201ENST00000337665 MT-ATP8P03928 68 aa10.02□□□□□ -0.81
ARHGEF1-201ENST00000337665 C2orf82Q6UX34 121 aa10.02□□□□□ -0.81
ARHGEF1-201ENST00000337665 ANAPC13Q9BS18 74 aa10.02□□□□□ -0.81
ARHGEF1-201ENST00000337665 COX7A2LO14548 114 aa10.01□□□□□ -0.81
ARHGEF1-201ENST00000337665 IGKV3OR2-268A0A0C4DH90 116 aa10.01□□□□□ -0.81
ARHGEF1-201ENST00000337665 INAFM1C9JVW0 142 aa10.01□□□□□ -0.81
ARHGEF1-201ENST00000337665 TMEM262E9PQX1 116 aa10.01□□□□□ -0.81
ARHGEF1-201ENST00000337665 PRO0255Q9UI72 69 aa10.01□□□□□ -0.81
ARHGEF1-201ENST00000337665 LYRM9A8MSI8 78 aa10□□□□□ -0.81
ARHGEF1-201ENST00000337665 C2CD3Q4AC94 2353 aa10□□□□□ -0.81
ARHGEF1-201ENST00000337665 DEFB121Q5J5C9 76 aa10□□□□□ -0.81
ARHGEF1-201ENST00000337665 FAM222AQ5U5X8 452 aa10□□□□□ -0.81
ARHGEF1-201ENST00000337665 UBE2WQ96B02 151 aa10□□□□□ -0.81
ARHGEF1-201ENST00000337665 MIR7-3HGQ8N6C7 128 aa9.99□□□□□ -0.81
ARHGEF1-201ENST00000337665 IGKV2-28A0A075B6P5 120 aa9.98□□□□□ -0.81
ARHGEF1-201ENST00000337665 IGKV2D-28P01615 120 aa9.98□□□□□ -0.81
ARHGEF1-201ENST00000337665 TOMM7Q9P0U1 55 aa9.98□□□□□ -0.81
ARHGEF1-201ENST00000337665 IBA57-AS1B1ANH7 110 aa9.97□□□□□ -0.81
ARHGEF1-201ENST00000337665 C5orf38Q86SI9 138 aa9.97□□□□□ -0.81
ARHGEF1-201ENST00000337665 LINC00337Q8N6G1 96 aa9.96□□□□□ -0.82
ARHGEF1-201ENST00000337665 TENM1Q9UKZ4 2725 aa9.96□□□□□ -0.82
ARHGEF1-201ENST00000337665 TRAV13-2A0A0B4J235 113 aa9.96□□□□□ -0.82
ARHGEF1-201ENST00000337665 LINC01561Q8N1V8 128 aa9.96□□□□□ -0.82
ARHGEF1-201ENST00000337665 NSD1Q96L73 2696 aaPredicted RBP9.95□□□□□ -0.82
ARHGEF1-201ENST00000337665 PAX4O43316 350 aa9.95□□□□□ -0.82
ARHGEF1-201ENST00000337665 RPL28P46779 137 aaKnown RBP9.95□□□□□ -0.82
ARHGEF1-201ENST00000337665 DEFB135Q30KP9 77 aa9.95□□□□□ -0.82
ARHGEF1-201ENST00000337665 CCL18P55774 89 aa9.94□□□□□ -0.82
ARHGEF1-201ENST00000337665 SND1-IT1Q9HBX3 110 aa9.94□□□□□ -0.82
ARHGEF1-201ENST00000337665 IGHV4-28A0A0C4DH34 117 aa9.94□□□□□ -0.82
ARHGEF1-201ENST00000337665 TRACP01848 142 aa9.94□□□□□ -0.82
ARHGEF1-201ENST00000337665 APOC4P55056 127 aa9.94□□□□□ -0.82
ARHGEF1-201ENST00000337665 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms