RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ZFAND6Q6FIF0 208 aa12.3□□□□□ -0.44
DDX28-201ENST00000332395 CDC42SE2Q9NRR3 84 aa12.3□□□□□ -0.44
DDX28-201ENST00000332395 UBE2L6O14933 153 aa12.29□□□□□ -0.44
DDX28-201ENST00000332395 FAM19A3Q7Z5A8 133 aa12.29□□□□□ -0.44
DDX28-201ENST00000332395 TRAV13-1A0A0B4J241 112 aa12.28□□□□□ -0.44
DDX28-201ENST00000332395 SLC25A20O43772 301 aa12.28□□□□□ -0.44
DDX28-201ENST00000332395 KIR2DL5BQ8NHK3 375 aa12.28□□□□□ -0.44
DDX28-201ENST00000332395 TMEM101Q96IK0 257 aa12.28□□□□□ -0.44
DDX28-201ENST00000332395 DEFB130BP0DP73 79 aa12.28□□□□□ -0.44
DDX28-201ENST00000332395 DEFB130AP0DP74 79 aa12.28□□□□□ -0.44
DDX28-201ENST00000332395 CITED1Q99966 193 aa12.28□□□□□ -0.44
DDX28-201ENST00000332395 IGHV3-33P01772 117 aa12.27□□□□□ -0.45
DDX28-201ENST00000332395 ANAPC13Q9BS18 74 aa12.27□□□□□ -0.45
DDX28-201ENST00000332395 X6R8D5 127 aa12.27□□□□□ -0.45
DDX28-201ENST00000332395 HIVEP1P15822 2718 aa12.27□□□□□ -0.45
DDX28-201ENST00000332395 EIF4EBP3O60516 100 aaPredicted RBP12.26□□□□□ -0.45
DDX28-201ENST00000332395 LINC00612Q8N6U2 182 aa12.26□□□□□ -0.45
DDX28-201ENST00000332395 C9JAW5 83 aa12.26□□□□□ -0.45
DDX28-201ENST00000332395 H7C423 109 aa12.26□□□□□ -0.45
DDX28-201ENST00000332395 ADAMTSL4-AS1Q5T5F5 129 aa12.26□□□□□ -0.45
DDX28-201ENST00000332395 SPANXDQ9BXN6 97 aa12.26□□□□□ -0.45
DDX28-201ENST00000332395 SPANXCQ9NY87 97 aa12.26□□□□□ -0.45
DDX28-201ENST00000332395 A0A0B4J2C4 111 aa12.25□□□□□ -0.45
DDX28-201ENST00000332395 IGLV5-39A0A0G2JS06 123 aa12.25□□□□□ -0.45
DDX28-201ENST00000332395 TENM1Q9UKZ4 2725 aa12.25□□□□□ -0.45
DDX28-201ENST00000332395 NDUFA1O15239 70 aa12.25□□□□□ -0.45
DDX28-201ENST00000332395 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.24□□□□□ -0.45
DDX28-201ENST00000332395 SMIM9A6NGZ8 99 aa12.24□□□□□ -0.45
DDX28-201ENST00000332395 PRSS2P07478 247 aa12.24□□□□□ -0.45
DDX28-201ENST00000332395 TRBV6-8A0A0A6YYG3 113 aa12.23□□□□□ -0.45
DDX28-201ENST00000332395 MIAQ16674 131 aa12.23□□□□□ -0.45
DDX28-201ENST00000332395 SMIM1B2RUZ4 78 aa12.23□□□□□ -0.45
DDX28-201ENST00000332395 GAGE6Q13070 117 aa12.22□□□□□ -0.45
DDX28-201ENST00000332395 TIMM17BO60830 172 aa12.22□□□□□ -0.45
DDX28-201ENST00000332395 LINC01600Q96MT4 127 aa12.22□□□□□ -0.45
DDX28-201ENST00000332395 F5H768 121 aa12.2□□□□□ -0.46
DDX28-201ENST00000332395 Q9H8V8 135 aa12.2□□□□□ -0.46
DDX28-201ENST00000332395 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
DDX28-201ENST00000332395 ATXN8Q156A1 80 aa12.2□□□□□ -0.46
DDX28-201ENST00000332395 CHCHD5Q9BSY4 110 aa12.2□□□□□ -0.46
DDX28-201ENST00000332395 NPC2P61916 151 aa12.19□□□□□ -0.46
DDX28-201ENST00000332395 DEFB135Q30KP9 77 aa12.19□□□□□ -0.46
DDX28-201ENST00000332395 LINC01620Q4KN68 170 aa12.19□□□□□ -0.46
DDX28-201ENST00000332395 H7C2G1 150 aa12.19□□□□□ -0.46
DDX28-201ENST00000332395 NTN5Q8WTR8 489 aaPredicted RBP12.19□□□□□ -0.46
DDX28-201ENST00000332395 IGLV4-60A0A075B6I1 120 aa12.18□□□□□ -0.46
DDX28-201ENST00000332395 GYPEP15421 78 aa12.18□□□□□ -0.46
DDX28-201ENST00000332395 FAM222AQ5U5X8 452 aa12.18□□□□□ -0.46
DDX28-201ENST00000332395 SS18L2Q9UHA2 77 aa12.18□□□□□ -0.46
DDX28-201ENST00000332395 SNCGO76070 127 aa12.18□□□□□ -0.46
DDX28-201ENST00000332395 APOC4P55056 127 aa12.18□□□□□ -0.46
DDX28-201ENST00000332395 GAGE2BQ13066 116 aa12.18□□□□□ -0.46
DDX28-201ENST00000332395 GAGE2EQ4V326 116 aa12.18□□□□□ -0.46
DDX28-201ENST00000332395 DAND5Q8N907 189 aa12.18□□□□□ -0.46
DDX28-201ENST00000332395 GAGE2DQ9UEU5 116 aa12.18□□□□□ -0.46
DDX28-201ENST00000332395 NBEAL2Q6ZNJ1 2754 aa12.17□□□□□ -0.46
DDX28-201ENST00000332395 LYRM9A8MSI8 78 aa12.17□□□□□ -0.46
DDX28-201ENST00000332395 RPL13AP40429 203 aaKnown RBP12.17□□□□□ -0.46
DDX28-201ENST00000332395 CIRBPQ14011 172 aaKnown RBP12.17□□□□□ -0.46
DDX28-201ENST00000332395 TRBV30A0A0K0K1B3 111 aa12.16□□□□□ -0.46
DDX28-201ENST00000332395 IFITM1P13164 125 aa12.16□□□□□ -0.46
DDX28-201ENST00000332395 Q1RN00 199 aa12.16□□□□□ -0.46
DDX28-201ENST00000332395 PRO0255Q9UI72 69 aa12.16□□□□□ -0.46
DDX28-201ENST00000332395 ATRQ13535 2644 aa12.16□□□□□ -0.46
DDX28-201ENST00000332395 TEP1Q99973 2627 aaKnown RBP12.16□□□□□ -0.46
DDX28-201ENST00000332395 Q6Q795 121 aa12.16□□□□□ -0.46
DDX28-201ENST00000332395 ZNF625Q96I27 306 aaPredicted RBP12.16□□□□□ -0.46
DDX28-201ENST00000332395 IGKV3OR2-268A0A0C4DH90 116 aa12.15□□□□□ -0.46
DDX28-201ENST00000332395 TRBV10-2A0A0K0K1G8 114 aa12.15□□□□□ -0.46
DDX28-201ENST00000332395 NDUFV3P56181 108 aaKnown RBP12.15□□□□□ -0.46
DDX28-201ENST00000332395 PRIMA1Q86XR5 153 aa12.15□□□□□ -0.47
DDX28-201ENST00000332395 DEFB4AO15263 64 aa12.14□□□□□ -0.47
DDX28-201ENST00000332395 WFDC9Q8NEX5 89 aa12.14□□□□□ -0.47
DDX28-201ENST00000332395 TRAV8-4A0A0B4J246 113 aa12.13□□□□□ -0.47
DDX28-201ENST00000332395 B5MCH6 92 aa12.13□□□□□ -0.47
DDX28-201ENST00000332395 TRIAP1O43715 76 aa12.13□□□□□ -0.47
DDX28-201ENST00000332395 IGHV4-28A0A0C4DH34 117 aa12.13□□□□□ -0.47
DDX28-201ENST00000332395 TRRAPQ9Y4A5 3859 aa12.13□□□□□ -0.47
DDX28-201ENST00000332395 TEX49A0A1B0GTD5 131 aa12.12□□□□□ -0.47
DDX28-201ENST00000332395 A0A0U1RRA0 63 aa12.12□□□□□ -0.47
DDX28-201ENST00000332395 HERV-K104P63124 156 aa12.12□□□□□ -0.47
DDX28-201ENST00000332395 UBE2WQ96B02 151 aa12.12□□□□□ -0.47
DDX28-201ENST00000332395 PAX4O43316 350 aa12.11□□□□□ -0.47
DDX28-201ENST00000332395 TTC32Q5I0X7 151 aa12.11□□□□□ -0.47
DDX28-201ENST00000332395 MEIG1Q5JSS6 88 aa12.11□□□□□ -0.47
DDX28-201ENST00000332395 LINC00308Q8TCZ7 52 aa12.11□□□□□ -0.47
DDX28-201ENST00000332395 IGHV3OR16-9A0A0B4J2B5 98 aa12.11□□□□□ -0.47
DDX28-201ENST00000332395 WIPF1O43516 503 aa12.11□□□□□ -0.47
DDX28-201ENST00000332395 A0A096LPF7 62 aa12.1□□□□□ -0.47
DDX28-201ENST00000332395 C15orf53Q8NAA6 179 aa12.09□□□□□ -0.47
DDX28-201ENST00000332395 Q8NAQ8 132 aa12.09□□□□□ -0.47
DDX28-201ENST00000332395 DAD1P61803 113 aa12.09□□□□□ -0.47
DDX28-201ENST00000332395 COX7B2Q8TF08 81 aa12.09□□□□□ -0.47
DDX28-201ENST00000332395 ICOSQ9Y6W8 199 aa12.09□□□□□ -0.47
DDX28-201ENST00000332395 MIFP14174 115 aa12.08□□□□□ -0.48
DDX28-201ENST00000332395 C2orf82Q6UX34 121 aa12.08□□□□□ -0.48
DDX28-201ENST00000332395 LINC00959A0A1B0GUT2 108 aa12.08□□□□□ -0.48
DDX28-201ENST00000332395 A0A1B0GUV1 79 aa12.08□□□□□ -0.48
DDX28-201ENST00000332395 H3BT86 120 aa12.08□□□□□ -0.48
DDX28-201ENST00000332395 CCDC179H3BU77 68 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 198.1 ms