RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 TIRAPP58753 221 aa10.28□□□□□ -0.76
PABPC1-201ENST00000318607 MIR7-3HGQ8N6C7 128 aa10.28□□□□□ -0.76
PABPC1-201ENST00000318607 CHCHD7Q9BUK0 85 aa10.28□□□□□ -0.76
PABPC1-201ENST00000318607 Q6ZTI0 123 aa10.28□□□□□ -0.76
PABPC1-201ENST00000318607 NCR3O14931 201 aa10.27□□□□□ -0.76
PABPC1-201ENST00000318607 CRPP02741 224 aa10.27□□□□□ -0.76
PABPC1-201ENST00000318607 NOP10Q9NPE3 64 aaKnown RBP10.27□□□□□ -0.77
PABPC1-201ENST00000318607 A0A0U1RQV1 116 aa10.27□□□□□ -0.77
PABPC1-201ENST00000318607 HERVK_113P63121 156 aa10.27□□□□□ -0.77
PABPC1-201ENST00000318607 ZNF415Q09FC8 603 aa10.27□□□□□ -0.77
PABPC1-201ENST00000318607 RBMY1BA6NDE4 496 aaKnown RBP10.26□□□□□ -0.77
PABPC1-201ENST00000318607 RBMY1EA6NEQ0 496 aaKnown RBP10.26□□□□□ -0.77
PABPC1-201ENST00000318607 RBMY1DP0C7P1 496 aaKnown RBP10.26□□□□□ -0.77
PABPC1-201ENST00000318607 C9orf129Q5T035 196 aaKnown RBP10.26□□□□□ -0.77
PABPC1-201ENST00000318607 WFDC10AQ9H1F0 79 aa10.26□□□□□ -0.77
PABPC1-201ENST00000318607 LECT2O14960 151 aa10.26□□□□□ -0.77
PABPC1-201ENST00000318607 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
PABPC1-201ENST00000318607 FAM104AQ969W3 186 aa10.26□□□□□ -0.77
PABPC1-201ENST00000318607 LINC00242Q5T6M2 205 aa10.25□□□□□ -0.77
PABPC1-201ENST00000318607 ESM1Q9NQ30 184 aa10.25□□□□□ -0.77
PABPC1-201ENST00000318607 UNC79Q9P2D8 2635 aa10.25□□□□□ -0.77
PABPC1-201ENST00000318607 A0A1B0GX51 115 aa10.24□□□□□ -0.77
PABPC1-201ENST00000318607 RPL36AP83881 106 aaKnown RBP10.24□□□□□ -0.77
PABPC1-201ENST00000318607 C4orf26Q17RF5 130 aa10.24□□□□□ -0.77
PABPC1-201ENST00000318607 IL17DQ8TAD2 202 aa10.24□□□□□ -0.77
PABPC1-201ENST00000318607 RPL36ALQ969Q0 106 aaKnown RBP10.24□□□□□ -0.77
PABPC1-201ENST00000318607 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
PABPC1-201ENST00000318607 COX7A2LO14548 114 aa10.24□□□□□ -0.77
PABPC1-201ENST00000318607 DEFB130BP0DP73 79 aa10.24□□□□□ -0.77
PABPC1-201ENST00000318607 DEFB130AP0DP74 79 aa10.24□□□□□ -0.77
PABPC1-201ENST00000318607 STHQ8IWL8 128 aa10.23□□□□□ -0.77
PABPC1-201ENST00000318607 IGLV1-40P01703 118 aa10.23□□□□□ -0.77
PABPC1-201ENST00000318607 A0A087WYN8 130 aa10.23□□□□□ -0.77
PABPC1-201ENST00000318607 PSMB8P28062 276 aa10.23□□□□□ -0.77
PABPC1-201ENST00000318607 RETNQ9HD89 108 aa10.22□□□□□ -0.77
PABPC1-201ENST00000318607 UBR5O95071 2799 aaPredicted RBP10.22□□□□□ -0.77
PABPC1-201ENST00000318607 SPANXA1Q9NS26 97 aa10.22□□□□□ -0.77
PABPC1-201ENST00000318607 XCL1P47992 114 aa10.21□□□□□ -0.77
PABPC1-201ENST00000318607 DSCR8Q96T75 97 aa10.21□□□□□ -0.77
PABPC1-201ENST00000318607 IGLV10-54A0A075B6I4 117 aa10.21□□□□□ -0.78
PABPC1-201ENST00000318607 SPANXDQ9BXN6 97 aa10.21□□□□□ -0.78
PABPC1-201ENST00000318607 SPANXCQ9NY87 97 aa10.21□□□□□ -0.78
PABPC1-201ENST00000318607 WFDC11Q8NEX6 87 aa10.2□□□□□ -0.78
PABPC1-201ENST00000318607 V9GYY9 64 aa10.2□□□□□ -0.78
PABPC1-201ENST00000318607 C10orf105Q8TEF2 133 aa10.2□□□□□ -0.78
PABPC1-201ENST00000318607 TRGV4A0A0C4DH28 118 aa10.2□□□□□ -0.78
PABPC1-201ENST00000318607 B4DSR2 109 aa10.2□□□□□ -0.78
PABPC1-201ENST00000318607 KIR2DL5BQ8NHK3 375 aa10.2□□□□□ -0.78
PABPC1-201ENST00000318607 SMIM1B2RUZ4 78 aa10.19□□□□□ -0.78
PABPC1-201ENST00000318607 K7EMT4 169 aa10.19□□□□□ -0.78
PABPC1-201ENST00000318607 C6orf226Q5I0X4 101 aa10.19□□□□□ -0.78
PABPC1-201ENST00000318607 RNF152Q8N8N0 203 aa10.19□□□□□ -0.78
PABPC1-201ENST00000318607 PEMTQ9UBM1 199 aa10.19□□□□□ -0.78
PABPC1-201ENST00000318607 TRAV23DV6A0A075B6W5 121 aa10.19□□□□□ -0.78
PABPC1-201ENST00000318607 NDUFA1O15239 70 aa10.19□□□□□ -0.78
PABPC1-201ENST00000318607 Q96MF0 132 aa10.19□□□□□ -0.78
PABPC1-201ENST00000318607 TEP1Q99973 2627 aaKnown RBP10.18□□□□□ -0.78
PABPC1-201ENST00000318607 INSP01308 110 aa10.18□□□□□ -0.78
PABPC1-201ENST00000318607 MALP21145 153 aa10.18□□□□□ -0.78
PABPC1-201ENST00000318607 LINC00337Q8N6G1 96 aa10.18□□□□□ -0.78
PABPC1-201ENST00000318607 PYGO1Q9Y3Y4 419 aa10.18□□□□□ -0.78
PABPC1-201ENST00000318607 ATRQ13535 2644 aa10.18□□□□□ -0.78
PABPC1-201ENST00000318607 HILS1P60008 231 aa10.17□□□□□ -0.78
PABPC1-201ENST00000318607 LINC00643Q86TS7 51 aa10.17□□□□□ -0.78
PABPC1-201ENST00000318607 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
PABPC1-201ENST00000318607 CYSTM1Q9H1C7 97 aa10.17□□□□□ -0.78
PABPC1-201ENST00000318607 C3orf22Q8N5N4 141 aa10.17□□□□□ -0.78
PABPC1-201ENST00000318607 SMIM11BQ8TCY0 68 aa10.17□□□□□ -0.78
PABPC1-201ENST00000318607 MAP6D1Q9H9H5 199 aa10.17□□□□□ -0.78
PABPC1-201ENST00000318607 HECTD1Q9ULT8 2610 aa10.17□□□□□ -0.78
PABPC1-201ENST00000318607 WIPF1O43516 503 aa10.16□□□□□ -0.78
PABPC1-201ENST00000318607 NTM-AS1Q6ZSK4 140 aa10.16□□□□□ -0.78
PABPC1-201ENST00000318607 A8MTW9 85 aa10.15□□□□□ -0.78
PABPC1-201ENST00000318607 Q6Q795 121 aa10.15□□□□□ -0.78
PABPC1-201ENST00000318607 LINC00846Q9NV44 126 aa10.15□□□□□ -0.78
PABPC1-201ENST00000318607 DEFB4AO15263 64 aa10.15□□□□□ -0.79
PABPC1-201ENST00000318607 H3BUA1 57 aa10.14□□□□□ -0.79
PABPC1-201ENST00000318607 DNAJC30Q96LL9 226 aa10.14□□□□□ -0.79
PABPC1-201ENST00000318607 PDZD2O15018 2839 aa10.14□□□□□ -0.79
PABPC1-201ENST00000318607 FAM236DA0A1B0GTK5 79 aa10.14□□□□□ -0.79
PABPC1-201ENST00000318607 FAM236CP0DP71 79 aa10.14□□□□□ -0.79
PABPC1-201ENST00000318607 HIST2H2BCQ6DN03 193 aa10.14□□□□□ -0.79
PABPC1-201ENST00000318607 IGLV4-60A0A075B6I1 120 aa10.13□□□□□ -0.79
PABPC1-201ENST00000318607 CXCL5P42830 114 aa10.13□□□□□ -0.79
PABPC1-201ENST00000318607 TMEM243Q9BU79 118 aa10.13□□□□□ -0.79
PABPC1-201ENST00000318607 TMEM126AQ9H061 195 aa10.13□□□□□ -0.79
PABPC1-201ENST00000318607 FASNP49327 2511 aaKnown RBP10.13□□□□□ -0.79
PABPC1-201ENST00000318607 HIVEP1P15822 2718 aa10.13□□□□□ -0.79
PABPC1-201ENST00000318607 COX7B2Q8TF08 81 aa10.12□□□□□ -0.79
PABPC1-201ENST00000318607 ITPR2Q14571 2701 aa10.12□□□□□ -0.79
PABPC1-201ENST00000318607 INAFM2P0DMQ5 153 aa10.12□□□□□ -0.79
PABPC1-201ENST00000318607 J3KT08 172 aa10.11□□□□□ -0.79
PABPC1-201ENST00000318607 UQCRQO14949 82 aa10.11□□□□□ -0.79
PABPC1-201ENST00000318607 TRACP01848 142 aa10.11□□□□□ -0.79
PABPC1-201ENST00000318607 HTN3P15516 51 aa10.11□□□□□ -0.79
PABPC1-201ENST00000318607 CCL18P55774 89 aa10.11□□□□□ -0.79
PABPC1-201ENST00000318607 C9orf116Q5BN46 136 aaPredicted RBP10.11□□□□□ -0.79
PABPC1-201ENST00000318607 K7EQD1 137 aa10.1□□□□□ -0.79
PABPC1-201ENST00000318607 HAMPP81172 84 aa10.1□□□□□ -0.79
PABPC1-201ENST00000318607 TRBV7-7A0A0K0K1E9 115 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms