RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 PAX4O43316 350 aa4.91□□□□□ -1.62
NPHP1-201ENST00000316534 KRTAP21-3Q3LHN1 58 aa4.91□□□□□ -1.62
NPHP1-201ENST00000316534 SDIM1Q6ZPB5 146 aa4.91□□□□□ -1.62
NPHP1-201ENST00000316534 LINC00959A0A1B0GUT2 108 aa4.91□□□□□ -1.62
NPHP1-201ENST00000316534 SMIM13P0DJ93 91 aa4.91□□□□□ -1.62
NPHP1-201ENST00000316534 DEFB130BP0DP73 79 aa4.9□□□□□ -1.62
NPHP1-201ENST00000316534 DEFB130AP0DP74 79 aa4.9□□□□□ -1.62
NPHP1-201ENST00000316534 LGALS3P17931 250 aaKnown RBP4.9□□□□□ -1.62
NPHP1-201ENST00000316534 SFTA2Q6UW10 78 aa4.9□□□□□ -1.62
NPHP1-201ENST00000316534 F8W1H4 67 aa4.9□□□□□ -1.62
NPHP1-201ENST00000316534 HERV-K104P63124 156 aa4.9□□□□□ -1.62
NPHP1-201ENST00000316534 MIAQ16674 131 aa4.9□□□□□ -1.62
NPHP1-201ENST00000316534 KRTAP26-1Q6PEX3 210 aa4.9□□□□□ -1.62
NPHP1-201ENST00000316534 MTORP42345 2549 aa4.9□□□□□ -1.63
NPHP1-201ENST00000316534 TRAV8-3A0A0A6YYJ7 113 aa4.9□□□□□ -1.63
NPHP1-201ENST00000316534 K7EIL1 84 aa4.9□□□□□ -1.63
NPHP1-201ENST00000316534 IFITM1P13164 125 aa4.9□□□□□ -1.63
NPHP1-201ENST00000316534 MRPL23Q16540 153 aaKnown RBP4.9□□□□□ -1.63
NPHP1-201ENST00000316534 RNASE13Q5GAN3 156 aaKnown RBP4.9□□□□□ -1.63
NPHP1-201ENST00000316534 VPS13DQ5THJ4 4388 aa4.9□□□□□ -1.63
NPHP1-201ENST00000316534 UBE2L6O14933 153 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 DEFB121Q5J5C9 76 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 ICOSQ9Y6W8 199 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 TMEM238C9JI98 176 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 SPINK8P0C7L1 97 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 CFC1BP0CG36 223 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 CFC1P0CG37 223 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 BATFQ16520 125 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 ADAMTSL4-AS1Q5T5F5 129 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 LYPD5Q6UWN5 251 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 TCTAP57738 103 aa4.89□□□□□ -1.63
NPHP1-201ENST00000316534 PKD1L1Q8TDX9 2849 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 HIST1H4GQ99525 98 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 CDIP1Q9H305 208 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 NDUFA12Q9UI09 145 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 TMEM238LA0A1B0GVL6 79 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 A6NJY4 79 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 PCP4P48539 62 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 KIAA0087Q14695 138 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 H3BMG7 143 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 GAGE6Q13070 117 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 GEMIN7Q9H840 131 aaKnown RBP4.88□□□□□ -1.63
NPHP1-201ENST00000316534 NOTCH2Q04721 2471 aa4.88□□□□□ -1.63
NPHP1-201ENST00000316534 GCSHP23434 173 aa4.87□□□□□ -1.63
NPHP1-201ENST00000316534 FOXI1Q12951 378 aa4.87□□□□□ -1.63
NPHP1-201ENST00000316534 Q8IZM0 81 aa4.87□□□□□ -1.63
NPHP1-201ENST00000316534 RETNQ9HD89 108 aa4.87□□□□□ -1.63
NPHP1-201ENST00000316534 DGAT2L7PQ6IED9 249 aa4.87□□□□□ -1.63
NPHP1-201ENST00000316534 CD164L2Q6UWJ8 174 aa4.87□□□□□ -1.63
NPHP1-201ENST00000316534 DEFB4AO15263 64 aa4.86□□□□□ -1.63
NPHP1-201ENST00000316534 TSPAN13O95857 204 aa4.86□□□□□ -1.63
NPHP1-201ENST00000316534 GTF2H5Q6ZYL4 71 aa4.86□□□□□ -1.63
NPHP1-201ENST00000316534 MUSTN1Q8IVN3 82 aa4.86□□□□□ -1.63
NPHP1-201ENST00000316534 MUC7Q8TAX7 377 aa4.86□□□□□ -1.63
NPHP1-201ENST00000316534 COX7B2Q8TF08 81 aa4.86□□□□□ -1.63
NPHP1-201ENST00000316534 KLK5Q9Y337 293 aaPredicted RBP4.86□□□□□ -1.63
NPHP1-201ENST00000316534 IGHV3-64A0A075B6Q5 118 aa4.86□□□□□ -1.63
NPHP1-201ENST00000316534 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.86□□□□□ -1.63
NPHP1-201ENST00000316534 K7ERJ3 54 aa4.86□□□□□ -1.63
NPHP1-201ENST00000316534 RPL24P83731 157 aaKnown RBP4.86□□□□□ -1.63
NPHP1-201ENST00000316534 UPK3BQ9BT76 320 aa4.86□□□□□ -1.63
NPHP1-201ENST00000316534 GVQW2A0A096LPI5 108 aaPredicted RBP4.85□□□□□ -1.63
NPHP1-201ENST00000316534 IGHV3-33P01772 117 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 ENHOQ6UWT2 76 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 SCGB1D4Q6XE38 83 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 Q6ZTC4 211 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 CARD19Q96LW7 228 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 CHCHD5Q9BSY4 110 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 NHP2Q9NX24 153 aaKnown RBP4.85□□□□□ -1.63
NPHP1-201ENST00000316534 A0A0J9YWU9 116 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 IBA57-AS1B1ANH7 110 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 H3BUT2 72 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 SOSTDC1Q6X4U4 206 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 MDFIQ99750 246 aa4.85□□□□□ -1.63
NPHP1-201ENST00000316534 WNK1Q9H4A3 2382 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 F8P00451 2351 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 TRAV13-1A0A0B4J241 112 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 TRAV8-4A0A0B4J246 113 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 TRBV30A0A0K0K1B3 111 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 A4D1N5 150 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 F8WDY8 70 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 DNAH10OSP0CZ25 163 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 COX17Q14061 63 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 SS18Q15532 418 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 LINC01556Q5JQF7 62 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 LINC00308Q8TCZ7 52 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 CSMD3Q7Z407 3707 aa4.84□□□□□ -1.63
NPHP1-201ENST00000316534 GAGE10A6NGK3 116 aa4.84□□□□□ -1.64
NPHP1-201ENST00000316534 CXCL5P42830 114 aa4.84□□□□□ -1.64
NPHP1-201ENST00000316534 Q9H8V8 135 aa4.84□□□□□ -1.64
NPHP1-201ENST00000316534 PRO1854Q9UHT4 67 aa4.84□□□□□ -1.64
NPHP1-201ENST00000316534 C22orf24Q9Y442 160 aa4.84□□□□□ -1.64
NPHP1-201ENST00000316534 K7ERU9 68 aa4.83□□□□□ -1.64
NPHP1-201ENST00000316534 RPL13AP40429 203 aaKnown RBP4.83□□□□□ -1.64
NPHP1-201ENST00000316534 REG3AQ06141 175 aa4.83□□□□□ -1.64
NPHP1-201ENST00000316534 C15orf53Q8NAA6 179 aa4.83□□□□□ -1.64
NPHP1-201ENST00000316534 COPS9Q8WXC6 57 aa4.83□□□□□ -1.64
NPHP1-201ENST00000316534 SPCS1Q9Y6A9 102 aa4.83□□□□□ -1.64
NPHP1-201ENST00000316534 PLECQ15149 4684 aaKnown RBP4.83□□□□□ -1.64
NPHP1-201ENST00000316534 TRAV10A0A0B4J240 114 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms