RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 TRAV13-1A0A0B4J241 112 aa17.22■□□□□ 0.35
CDPF1-201ENST00000314567 GCSHP23434 173 aa17.22■□□□□ 0.35
CDPF1-201ENST00000314567 CDKN2A-AS1Q9UH64 79 aa17.22■□□□□ 0.35
CDPF1-201ENST00000314567 IGHV3-64A0A075B6Q5 118 aa17.21■□□□□ 0.35
CDPF1-201ENST00000314567 HIST1H4GQ99525 98 aa17.21■□□□□ 0.35
CDPF1-201ENST00000314567 A0A1B0GUV1 79 aa17.2■□□□□ 0.34
CDPF1-201ENST00000314567 IGLV4-60A0A075B6I1 120 aa17.19■□□□□ 0.34
CDPF1-201ENST00000314567 COX6A2Q02221 97 aa17.19■□□□□ 0.34
CDPF1-201ENST00000314567 TRAV8-3A0A0A6YYJ7 113 aa17.18■□□□□ 0.34
CDPF1-201ENST00000314567 SPINK8P0C7L1 97 aa17.18■□□□□ 0.34
CDPF1-201ENST00000314567 H3BNG1 76 aa17.18■□□□□ 0.34
CDPF1-201ENST00000314567 TAX1BP3O14907 124 aa17.18■□□□□ 0.34
CDPF1-201ENST00000314567 SPANXB1Q9NS25 103 aaPredicted RBP17.18■□□□□ 0.34
CDPF1-201ENST00000314567 DNAH7Q8WXX0 4024 aa17.17■□□□□ 0.34
CDPF1-201ENST00000314567 FXYD2P54710 66 aa17.17■□□□□ 0.34
CDPF1-201ENST00000314567 COX11Q9Y6N1 276 aa17.17■□□□□ 0.34
CDPF1-201ENST00000314567 CSMD3Q7Z407 3707 aa17.17■□□□□ 0.34
CDPF1-201ENST00000314567 PTTG1IPP53801 180 aa17.16■□□□□ 0.34
CDPF1-201ENST00000314567 TMEM262E9PQX1 116 aa17.15■□□□□ 0.34
CDPF1-201ENST00000314567 RBX1P62877 108 aa17.15■□□□□ 0.34
CDPF1-201ENST00000314567 TRAV10A0A0B4J240 114 aa17.14■□□□□ 0.33
CDPF1-201ENST00000314567 IGLV5-39A0A0G2JS06 123 aa17.14■□□□□ 0.33
CDPF1-201ENST00000314567 ZFAND6Q6FIF0 208 aa17.14■□□□□ 0.33
CDPF1-201ENST00000314567 SRSF9Q13242 221 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDPF1-201ENST00000314567 LELP1Q5T871 98 aa17.12■□□□□ 0.33
CDPF1-201ENST00000314567 NDUFA12Q9UI09 145 aa17.12■□□□□ 0.33
CDPF1-201ENST00000314567 SMIM1B2RUZ4 78 aa17.11■□□□□ 0.33
CDPF1-201ENST00000314567 C10orf126Q8N4M7 172 aa17.11■□□□□ 0.33
CDPF1-201ENST00000314567 A0A0J9YXY3 114 aa17.1■□□□□ 0.33
CDPF1-201ENST00000314567 SMIM13P0DJ93 91 aa17.1■□□□□ 0.33
CDPF1-201ENST00000314567 TMEM238C9JI98 176 aa17.09■□□□□ 0.33
CDPF1-201ENST00000314567 CCL25O15444 150 aa17.09■□□□□ 0.33
CDPF1-201ENST00000314567 LINC00959A0A1B0GUT2 108 aa17.08■□□□□ 0.33
CDPF1-201ENST00000314567 TMEM238LA0A1B0GVL6 79 aa17.08■□□□□ 0.33
CDPF1-201ENST00000314567 A6NJY4 79 aa17.08■□□□□ 0.33
CDPF1-201ENST00000314567 K7EP13 123 aa17.08■□□□□ 0.33
CDPF1-201ENST00000314567 Q6ZVH6 145 aa17.08■□□□□ 0.33
CDPF1-201ENST00000314567 IGKV3OR2-268A0A0C4DH90 116 aa17.07■□□□□ 0.32
CDPF1-201ENST00000314567 NDUFA1O15239 70 aa17.07■□□□□ 0.32
CDPF1-201ENST00000314567 NHP2Q9NX24 153 aaKnown RBP17.07■□□□□ 0.32
CDPF1-201ENST00000314567 IGLL5B9A064 214 aa17.06■□□□□ 0.32
CDPF1-201ENST00000314567 SS18Q15532 418 aa17.05■□□□□ 0.32
CDPF1-201ENST00000314567 IGHV3OR16-9A0A0B4J2B5 98 aa17.05■□□□□ 0.32
CDPF1-201ENST00000314567 IGHV3-30P01768 117 aa17.05■□□□□ 0.32
CDPF1-201ENST00000314567 IGHV3-30-5P0DP03 117 aa17.05■□□□□ 0.32
CDPF1-201ENST00000314567 DYNC2H1Q8NCM8 4307 aaKnown RBP17.04■□□□□ 0.32
CDPF1-201ENST00000314567 A0A1B0GWB2 263 aa17.04■□□□□ 0.32
CDPF1-201ENST00000314567 C9orf118A6NHY6 69 aa17.04■□□□□ 0.32
CDPF1-201ENST00000314567 LYPD5Q6UWN5 251 aa17.03■□□□□ 0.32
CDPF1-201ENST00000314567 STARD9Q9P2P6 4700 aa17.03■□□□□ 0.32
CDPF1-201ENST00000314567 TIMM17BO60830 172 aa17.02■□□□□ 0.32
CDPF1-201ENST00000314567 LYSTQ99698 3801 aa17.02■□□□□ 0.31
CDPF1-201ENST00000314567 A0A087WZ39 114 aa17.01■□□□□ 0.31
CDPF1-201ENST00000314567 RAB37Q96AX2 223 aa17■□□□□ 0.31
CDPF1-201ENST00000314567 LITAFQ99732 161 aa17■□□□□ 0.31
CDPF1-201ENST00000314567 ANGP03950 147 aaKnown RBP16.99■□□□□ 0.31
CDPF1-201ENST00000314567 SPANXDQ9BXN6 97 aa16.99■□□□□ 0.31
CDPF1-201ENST00000314567 SPANXCQ9NY87 97 aa16.99■□□□□ 0.31
CDPF1-201ENST00000314567 K7ERJ3 54 aa16.99■□□□□ 0.31
CDPF1-201ENST00000314567 LINC00269Q8N2A0 174 aa16.99■□□□□ 0.31
CDPF1-201ENST00000314567 Q9H8V8 135 aa16.99■□□□□ 0.31
CDPF1-201ENST00000314567 LINC01561Q8N1V8 128 aa16.98■□□□□ 0.31
CDPF1-201ENST00000314567 HERV-K104P63124 156 aa16.97■□□□□ 0.31
CDPF1-201ENST00000314567 REG3AQ06141 175 aa16.97■□□□□ 0.31
CDPF1-201ENST00000314567 VAMP3Q15836 100 aa16.97■□□□□ 0.31
CDPF1-201ENST00000314567 ESRGQ1W209 222 aa16.97■□□□□ 0.31
CDPF1-201ENST00000314567 ZNF625Q96I27 306 aaPredicted RBP16.97■□□□□ 0.31
CDPF1-201ENST00000314567 TENM2Q9NT68 2774 aa16.97■□□□□ 0.31
CDPF1-201ENST00000314567 PLECQ15149 4684 aaKnown RBP16.96■□□□□ 0.31
CDPF1-201ENST00000314567 RPL24P83731 157 aaKnown RBP16.96■□□□□ 0.31
CDPF1-201ENST00000314567 CLPSL2Q6UWE3 100 aa16.96■□□□□ 0.31
CDPF1-201ENST00000314567 COX7B2Q8TF08 81 aa16.96■□□□□ 0.31
CDPF1-201ENST00000314567 H3BUT2 72 aa16.95■□□□□ 0.3
CDPF1-201ENST00000314567 CIRBPQ14011 172 aaKnown RBP16.95■□□□□ 0.3
CDPF1-201ENST00000314567 XCL1P47992 114 aa16.95■□□□□ 0.3
CDPF1-201ENST00000314567 MIAQ16674 131 aa16.94■□□□□ 0.3
CDPF1-201ENST00000314567 Q8N3U1 123 aa16.94■□□□□ 0.3
CDPF1-201ENST00000314567 C15orf53Q8NAA6 179 aa16.94■□□□□ 0.3
CDPF1-201ENST00000314567 CD164L2Q6UWJ8 174 aa16.93■□□□□ 0.3
CDPF1-201ENST00000314567 C5orf38Q86SI9 138 aa16.93■□□□□ 0.3
CDPF1-201ENST00000314567 MUSTN1Q8IVN3 82 aa16.93■□□□□ 0.3
CDPF1-201ENST00000314567 UBE2V1Q13404 147 aa16.92■□□□□ 0.3
CDPF1-201ENST00000314567 SFTA2Q6UW10 78 aa16.92■□□□□ 0.3
CDPF1-201ENST00000314567 CHCHD10Q8WYQ3 142 aaPredicted RBP16.91■□□□□ 0.3
CDPF1-201ENST00000314567 PRR34Q9NV39 138 aa16.91■□□□□ 0.3
CDPF1-201ENST00000314567 A0A1W2PPM0 123 aa16.9■□□□□ 0.3
CDPF1-201ENST00000314567 IFITM1P13164 125 aa16.9■□□□□ 0.3
CDPF1-201ENST00000314567 ADAMTSL4-AS1Q5T5F5 129 aa16.9■□□□□ 0.3
CDPF1-201ENST00000314567 NUPR2A6NF83 97 aa16.9■□□□□ 0.3
CDPF1-201ENST00000314567 APLNQ9ULZ1 77 aa16.9■□□□□ 0.3
CDPF1-201ENST00000314567 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.89■□□□□ 0.29
CDPF1-201ENST00000314567 TOMM7Q9P0U1 55 aa16.89■□□□□ 0.29
CDPF1-201ENST00000314567 A4D1N5 150 aa16.88■□□□□ 0.29
CDPF1-201ENST00000314567 WFDC10BQ8IUB3 73 aa16.88■□□□□ 0.29
CDPF1-201ENST00000314567 COX7A2LO14548 114 aa16.87■□□□□ 0.29
CDPF1-201ENST00000314567 APOMO95445 188 aa16.87■□□□□ 0.29
CDPF1-201ENST00000314567 PRSS2P07478 247 aa16.87■□□□□ 0.29
CDPF1-201ENST00000314567 NAA38Q9BRA0 125 aaKnown RBP16.87■□□□□ 0.29
CDPF1-201ENST00000314567 LINC00588Q9Y4M8 146 aa16.87■□□□□ 0.29
CDPF1-201ENST00000314567 CFC1BP0CG36 223 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms